BAC Information

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BAC

Clone NameB6Ng01-249D01
Chromosome12 (Build37)
Map Location 48,926,269 - 48,927,175
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039190, EG664891
Downstream geneGm1818
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249D01.bB6Ng01-249D01.g
ACCGA057074GA057075
length936991
definitionB6Ng01-249D01.b B6Ng01-249D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtctgaggttcagttagaatgaacaacaagaatttactatact
tagatgtgaaaagggctgaagatagttcagtgttctcatgcaagtgaaac
aattgttatattatcaaagttctccaggtaccatattccttttcatctac
tggcaaaaagaacagacccatgatcacttcactctaaccctaatgttcta
ggtggaaacacactttataaatgattatattcacatctgtattagggaaa
ggaaacttaaccaaaccttgctgtgaattctatgcttatattcattcagg
accaaactgtgttgagcaaaatactgaaacccagctccataaatgaatgt
gtaaaacagctgattcaacttggtttctcaacagatccattatttaactt
tttgtgcacatttaacatgacagacagttgtgtttactacccaacatatg
ggattatcatggcctccctctcctgaccgagtccatttgaacttttacca
ttacacagtatagcttcttgtaattctataagaattaatccatttgctca
actggaggtttcacccagcctattatctattatgccagtgagtttacttg
caattatggtctagaaaattaaaggccctataagactgatataaatttac
cttcaatgcctacctacagcattcacaccacagttgaaacaatatccatg
ttttacatcttttccatactagtgctacaaagaatagaaagtcagtcttc
tctttatagaaatcaaggagctttgttttgcatctctgtttctatctatt
ggtggttaatattcttcttaccagatacttatgtcctgtcttgacataat
tctttttctttccttttcttttccttttcctttcttttctttttcttttc
ttttccttttcttttttggccccttcctggcctacc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
ttcacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagcaggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaagcaa
atggatggacctggagggcatcattctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatatacgatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggatttacagagacaaagtttggagctgagacga
aaggatggaccatgtagagactgccatatccaggtatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtagatgctcacagtcagctattggatggatcacagggctccca
atggaggagctagagaaagtacccaaggagctaaaaggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_48926269_48927175
seq2: B6Ng01-249D01.b_45_962 (reverse)

seq1  CAAAAAAGAAAA-GAAAAGAAAAG-AAAAGAAAAGAAAAGAAAA-GAAAA  47
      |||||||||||| ||||||||||| ||||||||||||| ||||| |||||
seq2  CAAAAAAGAAAAGGAAAAGAAAAGAAAAAGAAAAGAAAGGAAAAGGAAAA  50

seq1  GAAAAGAAAAG-AAAAGAATTATGTCAAGACAGGACATAAGTATCTGGTA  96
      |||||| |||| ||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGAAAGAAAAAGAATTATGTCAAGACAGGACATAAGTATCTGGTA  100

seq1  AGAAGAATATTAACCACC-ATAGATAG-AACAGAGATGCAAAAC-AAGCT  143
      |||||||||||||||||| |||||||| |||||||||||||||| |||||
seq2  AGAAGAATATTAACCACCAATAGATAGAAACAGAGATGCAAAACAAAGCT  150

seq1  CCTTGA-TTCTATAAAGAGAAGACTGAC-TTCTATTC-TTGTAGCACTAG  190
      |||||| ||||||||||||||||||||| |||||||| ||||||||||||
seq2  CCTTGATTTCTATAAAGAGAAGACTGACTTTCTATTCTTTGTAGCACTAG  200

seq1  TATGGAAAAGATGTAAAACATGGATATTGTTTC-ACTGTGGTGTGAATGC  239
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TATGGAAAAGATGTAAAACATGGATATTGTTTCAACTGTGGTGTGAATGC  250

seq1  TGTAGGTAGGCATTGAAGGTAAATTTATATCAGTCTTATAGGGCCTTTAA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTAGGCATTGAAGGTAAATTTATATCAGTCTTATAGGGCCTTTAA  300

seq1  TTTTCTAGACCATAATTGCAAGTAAACTCACTGGCATAATAGATAATAGG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGACCATAATTGCAAGTAAACTCACTGGCATAATAGATAATAGG  350

seq1  CTGGGTGAAACCTCCAGTTGAGCAAATGGATTAATTCTTATAGAATTACA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGAAACCTCCAGTTGAGCAAATGGATTAATTCTTATAGAATTACA  400

seq1  AGAAGCTATACTGTGTAATGGTAAAAGTTCAAATGGACTCGGTCAGGAGA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTATACTGTGTAATGGTAAAAGTTCAAATGGACTCGGTCAGGAGA  450

seq1  GGGAGGCCATGATAATCCCATATGTTGGGTAGTAAACACAACTGTCTGTC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCCATGATAATCCCATATGTTGGGTAGTAAACACAACTGTCTGTC  500

seq1  ATGTTAAATGTGCACAAAAAGTTAAATAATGGATCTGTTGAGAAACCAAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAATGTGCACAAAAAGTTAAATAATGGATCTGTTGAGAAACCAAG  550

seq1  TTGAATCAGCTGTTTTACACATTCATTTATGGAGCTGGGTTTCAGTATTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAGCTGTTTTACACATTCATTTATGGAGCTGGGTTTCAGTATTT  600

seq1  TGCTCAACACAGTTTGGTCCTGAATGAATATAAGCATAGAATTCACAGCA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACACAGTTTGGTCCTGAATGAATATAAGCATAGAATTCACAGCA  650

seq1  AGGTTTGGTTAAGTTTCCTTTCCCTAATACAGATGTGAATATAATCATTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGTTAAGTTTCCTTTCCCTAATACAGATGTGAATATAATCATTT  700

seq1  ATAAAGTGTGTTTCCACCTAGAACATTAGGGTTAGAGTGAAGTGATCATG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTGTGTTTCCACCTAGAACATTAGGGTTAGAGTGAAGTGATCATG  750

seq1  GGTCTGTTCTTTTTGCCAGTAGATGAAAAGGAATATGGTACCTGGAGAAC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTTCTTTTTGCCAGTAGATGAAAAGGAATATGGTACCTGGAGAAC  800

seq1  TTTGATAATATAACAATTGTTTCACTTGCATGAGAACACTGAACTATCTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAATATAACAATTGTTTCACTTGCATGAGAACACTGAACTATCTT  850

seq1  CAGCCCTTTTCACATCTAAGTATAGTAAATTCTTGTTGTTCATTCTAACT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTTTCACATCTAAGTATAGTAAATTCTTGTTGTTCATTCTAACT  900

seq1  GAACCTCAGACAGAATTC  907
      ||||||||||||||||||
seq2  GAACCTCAGACAGAATTC  918