BAC Information

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BAC

Clone NameB6Ng01-250C21
Chromosome12 (Build37)
Map Location 59,646,055 - 59,647,153
singlet/doubletsinglet
Overlap genenone
Upstream geneFoxa1, 4921506M07Rik, EG217600, BC042761, Sstr1, Clec14a
Downstream geneLOC100040183, Sec23a, Sip1, Trappc6b, Pnn, EG544872, Mia2, Mgea6, Fbxo33, LOC665628, LOC238199, LOC665639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250C21.bB6Ng01-250C21.g
ACCGA057799GA057800
length1,098740
definitionB6Ng01-250C21.b B6Ng01-250C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttgtgagttcaccaggaaatctattctgggtctccttaatct
gaaaataaaaatattggcatggactgtgatctcagccggggctttggatt
cattccaagctcattaactgttggcagcaattgcctcacagcagagtggt
ggcagtgcccatgttctggctagacagctaggtactaaggttagaggcta
gaaactcctgtccctataaacagtgactccgatgaatagcgacttcttta
gaggaacaggtgtcactgtttctgttactgtgtcttgtgctgatggactc
aactaattaggtgaagatcacctagcaaaatatccctttagaataaccca
aactcattggattaaattctttattataccaagaaagtttcattatccaa
ccttgggagagctcttctaccacatagtcatagggtctctgtccaagggg
aacacatcataaatatgtatttcaaatttctttgctcaccatgttgtgac
aaatgtcttcagaacagaagtgctttggacaaatatagctgccacttaaa
catggatggtggccatgcttgtgggaaaggagaattcttaagtgttttca
tctgacaatgaaatgctttactgttacggaccagtattatatgatgacat
ccaagcagaaaaagactcagaagaagtgtaatatgatccccatgcctagg
aatataaatgtccagtgaaccactttgatctacttatatatttagattgt
tacaggtcagcttcttcaagatcttctcaagtatatatgtcagaaattgt
atcttatttagagattgactcataattaactggtagtcaatttcatggaa
tatttatacggaaggtaaatgttttgattctatgctcaaagagtgatcta
tttttatatgtgaaggtttcatgttgagaagttgtcagttgacaactgac
agctattggttttcttagctacatggcttactgtgcaagttgctgttgtg
caaaaattgaccttgacagcgtccaaatccccacagtggaataggggatc
agagaacacaaaaaggtagcaagcccagaaatgtgacaggaggaggcg
gaattctttgtttagctctgagccccattttttatcgggagttatttgat
tttctggagtccaccttcttgagttctttatatattttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaagatgatacaagat
acaagatacaagaaagatacaagatacaagaatttgcaaaacacatgaaa
ctcaagaactgaagaccagtatggacactttgccccttcttagaattggg
aacaaaacacccatggaaggagttacagacacaaaattggaactgagatg
aaaggatggaccatctagagattgccatgccaggggatccatcccataat
cagcctccaaaccctgacaccattgcatacactagcaagattttgcagaa
aggaccctgatatagctgtctcttgtgaggctatgtcggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcacagggccccc
aatggaggagctagagaaagtatccaaggagctaaaggggtctgcaaccc
tatgggtggaacaacaatatgaactaaccagtaccccctggagctcgtgt
ttctagctgcatatgtttcagaagatggcctagttggccattattggaaa
aagaggccccttggtcttgcaaactttatatgcctcagtatagggaaacg
ccagggccaaaaagtgggagtgggtgggtagggggagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_59646055_59647153
seq2: B6Ng01-250C21.b_44_1141 (reverse)

seq1  CGCCTCCTCCTTGTCACATCTCT-GGCTTGCTACCTTTTTGTGTTCTCTG  49
      |||||||||| |||||||| ||| ||||||||||||||||||||||||| 
seq2  CGCCTCCTCC-TGTCACATTTCTGGGCTTGCTACCTTTTTGTGTTCTCT-  48

seq1  GATCCCCTATTCCACTGTGGGGATTTGGACGCTGTCAAGGTCAATTTTTG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCCTATTCCACTGTGGGGATTTGGACGCTGTCAAGGTCAATTTTTG  98

seq1  CACAACAGCAACTTGCACAGTAAGCCATGTAGCTAAG-AAACCAATAGCT  148
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CACAACAGCAACTTGCACAGTAAGCCATGTAGCTAAGAAAACCAATAGCT  148

seq1  GTCAGTTGTCAACTGACAACTTTCTCAACATGAAACCTTCACATATAAAA  198
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTCAGTTGTCAACTGACAAC-TTCTCAACATGAAACCTTCACATATAAAA  197

seq1  ATAGATCACTCTTTGAGCATAGAATCAAAACATTTACCTTCCGTATAAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCACTCTTTGAGCATAGAATCAAAACATTTACCTTCCGTATAAAT  247

seq1  ATTCCATGAAATTGACTACCAGTTAATTATGAGTCAATCTCTAAATAAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATGAAATTGACTACCAGTTAATTATGAGTCAATCTCTAAATAAGA  297

seq1  TACAATTTCTGACATATATACTTGAGAAGATCTTGAAGAAGCTGACCTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATTTCTGACATATATACTTGAGAAGATCTTGAAGAAGCTGACCTGT  347

seq1  AACAATCTAAATATATAAGTAGATCAAAGTGGTTCACTGGACATTTATAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTAAATATATAAGTAGATCAAAGTGGTTCACTGGACATTTATAT  397

seq1  TCCTAGGCATGGGGATCATATTACACTTCTTCTGAGTCTTTTTCTGCTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGGCATGGGGATCATATTACACTTCTTCTGAGTCTTTTTCTGCTTG  447

seq1  GATGTCATCATATAATACTGGTCCGTAACAGTAAAGCATTTCATTGTCAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCATCATATAATACTGGTCCGTAACAGTAAAGCATTTCATTGTCAG  497

seq1  ATGAAAACACTTAAGAATTCTCCTTTCCCACAAGCATGGCCACCATCCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACACTTAAGAATTCTCCTTTCCCACAAGCATGGCCACCATCCAT  547

seq1  GTTTAAGTGGCAGCTATATTTGTCCAAAGCACTTCTGTTCTGAAGACATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGTGGCAGCTATATTTGTCCAAAGCACTTCTGTTCTGAAGACATT  597

seq1  TGTCACAACATGGTGAGCAAAGAAATTTGAAATACATATTTATGATGTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAACATGGTGAGCAAAGAAATTTGAAATACATATTTATGATGTGT  647

seq1  TCCCCTTGGACAGAGACCCTATGACTATGTGGTAGAAGAGCTCTCCCAAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTGGACAGAGACCCTATGACTATGTGGTAGAAGAGCTCTCCCAAG  697

seq1  GTTGGATAATGAAACTTTCTTGGTATAATAAAGAATTTAATCCAATGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATAATGAAACTTTCTTGGTATAATAAAGAATTTAATCCAATGAGT  747

seq1  TTGGGTTATTCTAAAGGGATATTTTGCTAGGTGATCTTCACCTAATTAGT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTATTCTAAAGGGATATTTTGCTAGGTGATCTTCACCTAATTAGT  797

seq1  TGAGTCCATCAGCACAAGACACAGTAACAGAAACAGTGACACCTGTTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCCATCAGCACAAGACACAGTAACAGAAACAGTGACACCTGTTCCT  847

seq1  CTAAAGAAGTCGCTATTCATCGGAGTCACTGTTTATAGGGACAGGAGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAAGTCGCTATTCATCGGAGTCACTGTTTATAGGGACAGGAGTTT  897

seq1  CTAGCCTCTAACCTTAGTACCTAGCTGTCTAGCCAGAACATGGGCACTGC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTCTAACCTTAGTACCTAGCTGTCTAGCCAGAACATGGGCACTGC  947

seq1  CACCACTCTGCTGTGAGGCAATTGCTGCCAACAGTTAATGAGCTTGGAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTCTGCTGTGAGGCAATTGCTGCCAACAGTTAATGAGCTTGGAAT  997

seq1  GAATCCAAAGCCCCGGCTGAGATCACAGTCCATGCCAATATTTTTATTTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAAAGCCCCGGCTGAGATCACAGTCCATGCCAATATTTTTATTTT  1047

seq1  CAGATTAAGGAGACCCAGAATAGATTTCCTGGTGAACTCACAACAGAATT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTAAGGAGACCCAGAATAGATTTCCTGGTGAACTCACAACAGAATT  1097

seq1  C  1099
      |
seq2  C  1098