BAC Information

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BAC

Clone NameB6Ng01-250F19
Chromosome12 (Build37)
Map Location 78,772,349 - 78,887,046
singlet/doubletdoublet
Overlap genenone
Upstream geneSpnb1, Churc1, Gpx2, Rab15, Fntb, Max, LOC100041765, LOC100041772, Fut8, LOC230765
Downstream geneLOC666659, EG626215, Gphn, 4921509E07Rik, Mpp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250F19.bB6Ng01-250F19.g
ACCGA057931GA057932
length6381,125
definitionB6Ng01-250F19.b B6Ng01-250F19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,886,409 - 78,887,046)(78,772,349 - 78,773,467)
sequence
gaattcttagagttgccagaagaagtgagtgttcttacacccttcttacg
gcagttagtcagaggttacagtgagcagtaaagacttcaaagttggcttt
tggatggcaatctgctccatttatccctgctcagcaccaccacccacctg
ctacgccaacctagttccagccacaaatgcctggagagttggttccatct
gtaaggcaaaccatgaggagaaaactgtgggttcacttcggtgcagcccc
gtgttctggcttccatgagccttgggtttgtcttcctctggctctgctaa
ggtgcagcatcagacagaaccgtcttccagacccagcaggtttgccaatt
tgttattgtgcaaacaaatcctgcctagtggtgtcgttgctgtaatggga
aagaagtgcattcatttccagttctgcgatgtgggcagacttctaaaggc
tctgttttccattcacatattaatgtccttcctgccacagctccaaacga
cttctgctcctaaacacgagccattttgctctggctgggggtggggtggg
gagtaatattttgctgtgcatctttccaaatgagacaaggctaaaggaac
tcattcctgtctcgtttccaggcaatacctgaaggaag

gaattctttatgcaaaaggtatctctgtggtctagataaactcttgtgct
ctggcatttccctgctttcccgctgtttcctccgtaaccttttacttcct
ttgttccttcccaggtctagcagacctttgtcacctggacaggatctgct
tagacagcttccagaccacatcaagagattttaatttcctcccagctttg
ttagcatttcacattgttacaggtcaaaacacaggggtattgacgaggaa
ctaagaaatgtcactaatgtggatccggagcactgtgatttccctcccag
tacttagagcagtgtgctatgcccctcgtcctggggagcttagcccagga
ctgacccccttcagcttctttctgccactgctgttaggagggctgtcacc
ctaggctgggacatgccagtgcatgttagatttggtgaggggactgcact
agtggctgctacgagtcaaagaaaattctcaaagacttaaactctatttc
ctagtgatgagaatttactcattcagaaggcatccattcttttgtagccc
tggctcctctgtttgattcttttactctttcaggggcaagtatgaagata
gtaataggagtggcaggatggagctgttgacttgtgtcttcccattctct
agcatcataaatgtaacgaggatagagcaagggcaggcagtgatgggcag
gggcttcagggcacaggatgcagttggttgtcattagaaacaactaatac
tttgggaacgtcctcttatttgggctcctgggtactaccctgaattgagt
ttctcttttgttcttctcaaacacttgcgtgctttcaggatcagccccaa
acccctttctaagttcacttagaaggtctccgccattctcccagctataa
atgcaacctgccaccaccaggcctccatttcagccctggttttttcttca
gaagctaacagaaaagtgtatccatttgctccttgatcttgtcacttggc
agttgcattggttagtgtctcattactgatgcaaaatgtctaaagtgctc
agtttagaaaatagaaatgttgttcggactgagcactctggaggcagagg
ccaagcgatctctgagagtttcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_78886409_78887046
seq2: B6Ng01-250F19.b_45_682 (reverse)

seq1  CTTCCTTCAGGTATTGCCTGGAAACGAGACAGGAATGAGTTCCTTTAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCAGGTATTGCCTGGAAACGAGACAGGAATGAGTTCCTTTAGCC  50

seq1  TTGTCTCATTTGGAAAGATGCACAGCAAAATATTACTCCCCACCCCACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCATTTGGAAAGATGCACAGCAAAATATTACTCCCCACCCCACCC  100

seq1  CCAGCCAGAGCAAAATGGCTCGTGTTTAGGAGCAGAAGTCGTTTGGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAGAGCAAAATGGCTCGTGTTTAGGAGCAGAAGTCGTTTGGAGCT  150

seq1  GTGGCAGGAAGGACATTAATATGTGAATGGAAAACAGAGCCTTTAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGAAGGACATTAATATGTGAATGGAAAACAGAGCCTTTAGAAGT  200

seq1  CTGCCCACATCGCAGAACTGGAAATGAATGCACTTCTTTCCCATTACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCACATCGCAGAACTGGAAATGAATGCACTTCTTTCCCATTACAGC  250

seq1  AACGACACCACTAGGCAGGATTTGTTTGCACAATAACAAATTGGCAAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGACACCACTAGGCAGGATTTGTTTGCACAATAACAAATTGGCAAACC  300

seq1  TGCTGGGTCTGGAAGACGGTTCTGTCTGATGCTGCACCTTAGCAGAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGTCTGGAAGACGGTTCTGTCTGATGCTGCACCTTAGCAGAGCCA  350

seq1  GAGGAAGACAAACCCAAGGCTCATGGAAGCCAGAACACGGGGCTGCACCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGACAAACCCAAGGCTCATGGAAGCCAGAACACGGGGCTGCACCG  400

seq1  AAGTGAACCCACAGTTTTCTCCTCATGGTTTGCCTTACAGATGGAACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAACCCACAGTTTTCTCCTCATGGTTTGCCTTACAGATGGAACCAA  450

seq1  CTCTCCAGGCATTTGTGGCTGGAACTAGGTTGGCGTAGCAGGTGGGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGGCATTTGTGGCTGGAACTAGGTTGGCGTAGCAGGTGGGTGGT  500

seq1  GGTGCTGAGCAGGGATAAATGGAGCAGATTGCCATCCAAAAGCCAACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGAGCAGGGATAAATGGAGCAGATTGCCATCCAAAAGCCAACTTT  550

seq1  GAAGTCTTTACTGCTCACTGTAACCTCTGACTAACTGCCGTAAGAAGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTTTACTGCTCACTGTAACCTCTGACTAACTGCCGTAAGAAGGGT  600

seq1  GTAAGAACACTCACTTCTTCTGGCAACTCTAAGAATTC  638
      ||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAACACTCACTTCTTCTGGCAACTCTAAGAATTC  638


seq1: chr12_78772349_78773467
seq2: B6Ng01-250F19.g_68_1192

seq1  GAATTCTTTATGCAAAAGGTATCTCTGTGGTCTAGATAAACTCTTGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTATGCAAAAGGTATCTCTGTGGTCTAGATAAACTCTTGTGCT  50

seq1  CTGGCATTTCCCTGCTTTCCCGCTGTTTCCTCCGTAACCTTTTACTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCATTTCCCTGCTTTCCCGCTGTTTCCTCCGTAACCTTTTACTTCCT  100

seq1  TTGTTCCTTCCCAGGTCTAGCAGACCTTTGTCACCTGGACAGGATCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTTCCCAGGTCTAGCAGACCTTTGTCACCTGGACAGGATCTGCT  150

seq1  TAGACAGCTTCCAGACCACATCAAGAGATTTTAATTTCCTCCCAGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGCTTCCAGACCACATCAAGAGATTTTAATTTCCTCCCAGCTTTG  200

seq1  TTAGCATTTCACATTGTTACAGGTCAAAACACAGGGGTATTGACGAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTTCACATTGTTACAGGTCAAAACACAGGGGTATTGACGAGGAA  250

seq1  CTAAGAAATGTCACTAATGTGGATCCGGAGCACTGTGATTTCCCTCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAATGTCACTAATGTGGATCCGGAGCACTGTGATTTCCCTCCCAG  300

seq1  TACTTAGAGCAGTGTGCTATGCCCCTCGTCCTGGGGAGCTTAGCCCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGAGCAGTGTGCTATGCCCCTCGTCCTGGGGAGCTTAGCCCAGGA  350

seq1  CTGACCCCCTTCAGCTTCTTTCTGCCACTGCTGTTAGGAGGGCTGTCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCCCTTCAGCTTCTTTCTGCCACTGCTGTTAGGAGGGCTGTCACC  400

seq1  CTAGGCTGGGACATGCCAGTGCATGTTAGATTTGGTGAGGGGACTGCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCTGGGACATGCCAGTGCATGTTAGATTTGGTGAGGGGACTGCACT  450

seq1  AGTGGCTGCTACGAGTCAAAGAAAATTCTCAAAGACTTAAACTCTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTGCTACGAGTCAAAGAAAATTCTCAAAGACTTAAACTCTATTTC  500

seq1  CTAGTGATGAGAATTTACTCATTCAGAAGGCATCCATTCTTTTGTAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGATGAGAATTTACTCATTCAGAAGGCATCCATTCTTTTGTAGCCC  550

seq1  TGGCTCCTCTGTTTGATTCTTTTACTCTTTCAGGGGCAAGTATGAAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCTCTGTTTGATTCTTTTACTCTTTCAGGGGCAAGTATGAAGATA  600

seq1  GTAATAGGAGTGGCAGGATGGAGCTGTTGACTTGTGTCTTCCCATTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGGAGTGGCAGGATGGAGCTGTTGACTTGTGTCTTCCCATTCTCT  650

seq1  AGCATCATAAATGTAACGAGGATAGAGCAAGGGCAGGCAGTGATGGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATAAATGTAACGAGGATAGAGCAAGGGCAGGCAGTGATGGGCAG  700

seq1  GGGCTTCAGGGCACAGGATGCAGTTGGTTGTCATTAGAAACAACTAATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAGGGCACAGGATGCAGTTGGTTGTCATTAGAAACAACTAATAC  750

seq1  TTTGGGAACGTCCTCTTATTTGGGCTCCTGGGTACTACCCTGAATTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAACGTCCTCTTATTTGGGCTCCTGGGTACTACCCTGAATTGAGT  800

seq1  TTCTCTTTTGTTCTTCTCAAACACTTGCGTGCTTTCAGGATCAGCCCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTGTTCTTCTCAAACACTTGCGTGCTTTCAGGATCAGCCCCAA  850

seq1  ACCCCTTTCTAAGTTCACTAAGAAGGTCTCCGCCATTCTCCCAGCTATAA  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCCCTTTCTAAGTTCACTTAGAAGGTCTCCGCCATTCTCCCAGCTATAA  900

seq1  ATGCAACCTGCCACCA-CAAGCCTCCATTTCAGCCCTGG-TTTTTCTTCA  948
      |||||||||||||||| || ||||||||||||||||||| ||||||||||
seq2  ATGCAACCTGCCACCACCAGGCCTCCATTTCAGCCCTGGTTTTTTCTTCA  950

seq1  G-AGCT-ACAG-AAAGTGTATCCATTTGCTCCTTGATCTGTTCACTTGGC  995
      | |||| |||| |||||||||||||||||||||||||||  |||||||||
seq2  GAAGCTAACAGAAAAGTGTATCCATTTGCTCCTTGATCTTGTCACTTGGC  1000

seq1  AGTTGCATTGGTTAGTGTCTCATTACTGATGCAAAATGTCTAAAGTGCTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCATTGGTTAGTGTCTCATTACTGATGCAAAATGTCTAAAGTGCTC  1050

seq1  AGTTTAGAAATAGGAAATGT--GTCGGACATTGAGCACTCTGGAGGCAGA  1093
      ||||||||||   |||||||   ||||||  |||||||||||||||||||
seq2  AGTTTAGAAAATAGAAATGTTGTTCGGAC--TGAGCACTCTGGAGGCAGA  1098

seq1  GG-CAAGCAGATCTCTGAGAG-TTCAGG  1119
      || ||||| |||||||||||| ||||||
seq2  GGCCAAGC-GATCTCTGAGAGTTTCAGG  1125


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