BAC Information

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BAC

Clone NameB6Ng01-251B15
Chromosome12 (Build37)
Map Location 79,496,758 - 79,497,861
singlet/doubletsinglet
Overlap geneGphn
Upstream geneFut8, LOC230765, LOC666659, EG626215
Downstream gene4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1, Pigh, LOC666722, Arg2, Vti1b, Rdh11, Rdh12, Zfyve26, Rad51l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251B15.bB6Ng01-251B15.g
ACCGA058461GA058462
length1,1751,100
definitionB6Ng01-251B15.b B6Ng01-251B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttggtagatttttttttcctttgatgagtatgaagtgtcct
tcctcatctttttttgataacttttttttgaaagtcgattttattcgata
ttaaaatggctatttcaccttgtttcttgggaccatttgtttggaatttt
tcccccaaccttttaccgtgaggtagtgtatgtctttgttactgaggtac
gtttcctttatgcagcaaatttctgggtcctgtttatatatccagtctgt
tagtttatgtctttttattggggaattgagtccattgatgttaagagata
ttaaggaaaagtgattgttgcttcctgatatttttgttgttaataggtgg
aattatgtttgtgtggctatcttcttttggatttattgaaagaagattac
tttcttgctttttcttgggtgtagtttccctccttgtgttggcattttcc
acctgttatcctttgtaggactggatttgtagaaagatattgtataaatt
tggttttgtcatagaatatctccgttgaggagcctggtgtaattttgata
ggtctgtctttatatgttacttgacttttttcctttgctgtttttaatat
tttttctttgttttatgtatttggtgttttgattattatgtgacggttta
atttcttttctggtccaatctatttagggttctgtaggcttcctgtatgt
tcatggtcatctctttctttaggttaggaaagttttcttctaggatttta
tagaagatatttactggctgtttgagtagggaatctttactctcttttat
gcctattatttttaggcttcatcttctcattatgtcccgtatttcctgga
tgttttgggttagtagctttttgcatttttcattttctttgcctgttgtg
tcaatgttttctatggtatcttctacacctgcgattctctcttctatctc
ttgtattctgttggtgatgcttgcaactatgacttctgatctctttccta
agttttctgtcttccaggtgtccctctgaaatttctcattttcaatttta
gatcctggaatagtttgttcatttcctcactgctggatggattttcccta
atttcttaaggacttatgtgtttcctatagctctacctggttacctgtgc
ttcgttatcctgtaagggattatga
gaattctaaatacactatacatataatacatttgctaagataaaatactt
caccgacatttttctcttatactcaaaaattatcttctagacctaagaat
tctgagtgtgtcctcttaaaagatttaatatataaattatattacttgaa
aaatgttttttttaatcttgggaattgaatgctttcaggatcattcatta
aaccacaaaatatttacctattaactgtaactgaaacagtttaagaatta
actcattaaaattagaaatatttgctcagcaaagactttaagatagtaag
aaaggagatggaaatgcatatgtgaagcacatgcctcagaggacttagaa
cctattagatacacctgctaataaatgaggacaagacagacaacctaata
ttcaagaagagaacgtacacagaaatatcacaaatgaagagatacaaatg
tcaaaaaaatgtatcgaaagatattcaataggcttactacactgctggaa
tgtaaagcaaactgaaattctgaaaaaagatttatagaagtacaaattgt
cctattcacttgagaaaattcaggttccagtaaatataattcatttgcat
attctttaatttgattattttcatatctatttattctgtcaaataggtac
aaatgtaataggaatacacacacatgtacaccaaaagacatgattaagac
tgattattgccaagatttttcacaatagcatatagttgaaaaccactgtc
ttcaaaatagaatgaatgcttaaatttttctattttaatgaaaagacagc
actcatgtggatatagatttcaaaacgataaagataattcgtggtgctag
atttgggtcattttggataaaggtaaggagcagtaattggtaatggggta
gagaaagcgttagtcatgctcacaatgttctattccctcttattattgtt
attagtttcttttcatgcatggtgagcatattccccactcactgtcacat
aatcttcttcttacctttccctcttcctgtataccaggagtggtatacct
tagtcatatagaagtttattttaataatgcttgatatgtttgtgctgttg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79496758_79497861
seq2: B6Ng01-251B15.g_66_1165 (reverse)

seq1  CAACAGCAACAAAACAAAAACAAGCA-TATAAAATAAAACTTCTATATGA  49
      ||||||| |||||   | | |||||| ||| |||  ||||||||||||||
seq2  CAACAGC-ACAAA--CATATCAAGCATTATTAAAATAAACTTCTATATGA  47

seq1  CCTAGGTATACCACTCCTGGGTATTACAGGAAGAGGGAAAGGTAAGAAAG  99
      |  ||||||||||||||| |||| |||||||||||||||||||||| |||
seq2  CTAAGGTATACCACTCCT-GGTA-TACAGGAAGAGGGAAAGGTAAG-AAG  94

seq1  AAGATTATTGTGACAGTGAGT-GGGAATATGCTCACCATGCATGAAAAGA  148
      ||||||| ||||||||||||| ||||||||||||||||||||||||||| 
seq2  AAGATTA-TGTGACAGTGAGTGGGGAATATGCTCACCATGCATGAAAAG-  142

seq1  AAACTAATAACAATAATAAGA-GGAATAGAACATTGTGAGCATGACTAAC  197
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAACTAATAACAATAATAAGAGGGAATAGAACATTGTGAGCATGACTAAC  192

seq1  GCTTTCTCTACCCCATTACCAATTACTGCTCCTTACC-TTATCCAAAATG  246
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCTTTCTCTACCCCATTACCAATTACTGCTCCTTACCTTTATCCAAAATG  242

seq1  ACCCAAATCTAGCACCACGAATTATCTTTATCGTTTTGAAATCTATATCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATCTAGCACCACGAATTATCTTTATCGTTTTGAAATCTATATCC  292

seq1  ACATGAGTGCTGTCTTTTCATTAAAATAGAAAAATTTAAGCATTCATTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGTGCTGTCTTTTCATTAAAATAGAAAAATTTAAGCATTCATTCT  342

seq1  ATTTTGAAGACAGTGGTTTTCAACTATATGCTATTGTGAAAAATCTTGGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAAGACAGTGGTTTTCAACTATATGCTATTGTGAAAAATCTTGGC  392

seq1  AATAATCAGTCTTAATCATGTCTTTTGGTGTACATGTGTGTGTATTCCTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAGTCTTAATCATGTCTTTTGGTGTACATGTGTGTGTATTCCTA  442

seq1  TTACATTTGTACCTATTTGACAGAATAAATAGATATGAAAATAATCAAAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATTTGTACCTATTTGACAGAATAAATAGATATGAAAATAATCAAAT  492

seq1  TAAAGAATATGCAAATGAATTATATTTACTGGAACCTGAATTTTCTCAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATATGCAAATGAATTATATTTACTGGAACCTGAATTTTCTCAAG  542

seq1  TGAATAGGACAATTTGTACTTCTATAAATCTTTTTTCAGAATTTCAGTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGACAATTTGTACTTCTATAAATCTTTTTTCAGAATTTCAGTTT  592

seq1  GCTTTACATTCCAGCAGTGTAGTAAGCCTATTGAATATCTTTCGATACAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTACATTCCAGCAGTGTAGTAAGCCTATTGAATATCTTTCGATACAT  642

seq1  TTTTTTGACATTTGTATCTCTTCATTTGTGATATTTCTGTGTACGTTCTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGACATTTGTATCTCTTCATTTGTGATATTTCTGTGTACGTTCTC  692

seq1  TTCTTGAATATTAGGTTGTCTGTCTTGTCCTCATTTATTAGCAGGTGTAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAATATTAGGTTGTCTGTCTTGTCCTCATTTATTAGCAGGTGTAT  742

seq1  CTAATAGGTTCTAAGTCCTCTGAGGCATGTGCTTCACATATGCATTTCCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGGTTCTAAGTCCTCTGAGGCATGTGCTTCACATATGCATTTCCA  792

seq1  TCTCCTTTCTTACTATCTTAAAGTCTTTGCTGAGCAAATATTTCTAATTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTCTTACTATCTTAAAGTCTTTGCTGAGCAAATATTTCTAATTT  842

seq1  TAATGAGTTAATTCTTAAACTGTTTCAGTTACAGTTAATAGGTAAATATT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGTTAATTCTTAAACTGTTTCAGTTACAGTTAATAGGTAAATATT  892

seq1  TTGTGGTTTAATGAATGATCCTGAAAGCATTCAATTCCCAAGATTAAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTTAATGAATGATCCTGAAAGCATTCAATTCCCAAGATTAAAAA  942

seq1  AAACATTTTTCAAGTAATATAATTTATATATTAAATCTTTTAAGAGGACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTTTCAAGTAATATAATTTATATATTAAATCTTTTAAGAGGACA  992

seq1  CACTCAGAATTCTTAGGTCTAGAAGATAATTTTTGAGTATAAGAGAAAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAATTCTTAGGTCTAGAAGATAATTTTTGAGTATAAGAGAAAAA  1042

seq1  TGTCGGTGAAGTATTTTATCTTAGCAAATGTATTATATGTATAGTGTATT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGGTGAAGTATTTTATCTTAGCAAATGTATTATATGTATAGTGTATT  1092

seq1  TAGAATTC  1104
      ||||||||
seq2  TAGAATTC  1100