BAC Information

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BAC

Clone NameB6Ng01-251L23
Chromosome12 (Build37)
Map Location 96,933,466 - 97,085,744
singlet/doubletdoublet
Overlap geneLOC667688, Flrt2
Upstream geneLOC217786, LOC100039603
Downstream gene1700019M22Rik, LOC100039664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251L23.bB6Ng01-251L23.g
ACCGA058923GA058924
length1,145336
definitionB6Ng01-251L23.b B6Ng01-251L23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,084,601 - 97,085,744)(96,933,466 - 96,933,800)
sequence
gaattcaggatcttaatctgactttgcttgaaattttcactctgagaatc
actcttaaagaaaatcatttagtaaaattgaaacgataaagccaagtatt
tacacaagccctttgcagtacaatactgccagtagggacctggaagcatc
ctttttagctccagacagggggattctaaggttccaggaaggatcccaga
gctgaaacaacaatatgcaattcagatcgaccgaggattgttacatctga
aaaaaatataaaaggaataaaagaaacatgttcatgtttgggggttgtag
tgaaatagtagatgtaattaaaatacagccagataggctccccagacagt
ctggattcaaagttctagcgggatgtaatttaacaatcacagcaatgctg
tccagtggcttttccaggctgtgtttgtgatatgtgtgtgtgtatcgtcc
tgatggtgccctggtggtctatttgttggaggtctttttctttctgttaa
gtatgcatttttggcttgctctctacctccctggttggttcattcaccct
aattatgatcacctgataaaaagtggaagcgacacatccaaacctctagt
ccaaacagtcctaatagccaggaagccctgccatttgtccaatttaaata
agagggcacactttacccagaggaaaccaaagcagcctgccacagaagtg
ccttccaaacactctccatttctcctcagtattcaacacggtcttttaag
caacaggcagttataataatggttaagtgatcctctatgttttccaaatg
gaagtcagatttagaaggtgttgggttcttacagaactgctaaattccta
gacttaaacatttcaatacttaatcgtgaaatagctcaaaaatgtacttg
actgtggaaatattaaacagaaatctacaggggtgctttgttatttcaaa
attacttagaaaacacagcacagaaaatagctaatgcactccttcccatg
ggatcattgtcaaaaagatgggttaataatgtatcatattaacatgaata
tagggttattgtgtgttgcctgatatactagccaagacttcactattgac
atggaaaatagacgctgagatgaacaggcctgaagaaaaacatac
attacagtaaacatttcccaagagggagggggtgtcaggtgagggtgggg
gtggagacctcgctcccagcctacattagctgacccggtcggatcaaggc
tgcagtgtggctggagcagcctccagccccgcgccccgcagactctgcac
ttggagtcagccgcgcgcccgcccccgcgcagcccgaactgcacgcccgg
ctgcgcgtggtccgcgccttctctgcgaccgagctggttccccaaaccga
cccgcgtagccctgggtctctcggcagtccgggactcgctcggacgctct
tcaccgccctcttagatcgccctacttttgtcgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_97084601_97085744
seq2: B6Ng01-251L23.b_47_1191 (reverse)

seq1  GTATGTTTTTC-TCA-GCCTG-TCATCCTCAGCCTTCTA-TTTCAATGTC  46
      ||||||||||| ||| ||||| |||| ||||| | |||| |||| |||||
seq2  GTATGTTTTTCTTCAGGCCTGTTCAT-CTCAG-CGTCTATTTTCCATGTC  48

seq1  AATAGTG-AGTCTTTGCTTAGTAATATCAGGC-ACACACAATTACCCTAT  94
      ||||||| |||||| || |||| ||||||||| ||||||||| |||||||
seq2  AATAGTGAAGTCTTGGC-TAGT-ATATCAGGCAACACACAATAACCCTAT  96

seq1  ATTCATGTTAATATGATACAATTATTAACCCATCTTTTTGACAATGATCC  144
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ATTCATGTTAATATGATAC-ATTATTAACCCATCTTTTTGACAATGATCC  145

seq1  CATGGGAAGGAGTGCATTAGCTATTTTCTGTGCTGTGTTTTCTAAGTAAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAAGGAGTGCATTAGCTATTTTCTGTGCTGTGTTTTCTAAGTAAT  195

seq1  TTTGAAATAACAAAGCACCCCTGTAGATTTCTGTTTAATATTTCCACAGT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATAACAAAGCACCCCTGTAGATTTCTGTTTAATATTTCCACAGT  245

seq1  CAAGTACATTTTTGAGCTATTTCACGATTAAGTATTGAAATGTTTAAGTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACATTTTTGAGCTATTTCACGATTAAGTATTGAAATGTTTAAGTC  295

seq1  TAGGAATTTAGCAGTTCTGTAAGAACCCAACACCTTCTAAATCTGACTTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATTTAGCAGTTCTGTAAGAACCCAACACCTTCTAAATCTGACTTC  345

seq1  CATTTGGAAAACATAGAGGATCACTTAACCATTATTATAACTGCCTGTTG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGAAAACATAGAGGATCACTTAACCATTATTATAACTGCCTGTTG  395

seq1  CTTAAAAGACCGTGTTGAATACTGAGGAGAAATGGAGAGTGTTTGGAAGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGACCGTGTTGAATACTGAGGAGAAATGGAGAGTGTTTGGAAGG  445

seq1  CACTTCTGTGGCAGGCTGCTTTGGTTTCCTCTGGGTAAAGTGTGCCCTCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTGGCAGGCTGCTTTGGTTTCCTCTGGGTAAAGTGTGCCCTCT  495

seq1  TATTTAAATTGGACAAATGGCAGGGCTTCCTGGCTATTAGGACTGTTTGG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAATTGGACAAATGGCAGGGCTTCCTGGCTATTAGGACTGTTTGG  545

seq1  ACTAGAGGTTTGGATGTGTCGCTTCCACTTTTTATCAGGTGATCATAATT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAGGTTTGGATGTGTCGCTTCCACTTTTTATCAGGTGATCATAATT  595

seq1  AGGGTGAATGAACCAACCAGGGAGGTAGAGAGCAAGCCAAAAATGCATAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAATGAACCAACCAGGGAGGTAGAGAGCAAGCCAAAAATGCATAC  645

seq1  TTAACAGAAAGAAAAAGACCTCCAACAAATAGACCACCAGGGCACCATCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGAAAGAAAAAGACCTCCAACAAATAGACCACCAGGGCACCATCA  695

seq1  GGACGATACACACACACATATCACAAACACAGCCTGGAAAAGCCACTGGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGATACACACACACATATCACAAACACAGCCTGGAAAAGCCACTGGA  745

seq1  CAGCATTGCTGTGATTGTTAAATTACATCCCGCTAGAACTTTGAATCCAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTGCTGTGATTGTTAAATTACATCCCGCTAGAACTTTGAATCCAG  795

seq1  ACTGTCTGGGGAGCCTATCTGGCTGTATTTTAATTACATCTACTATTTCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGGGGAGCCTATCTGGCTGTATTTTAATTACATCTACTATTTCA  845

seq1  CTACAACCCCCAAACATGAACATGTTTCTTTTATTCCTTTTATATTTTTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACCCCCAAACATGAACATGTTTCTTTTATTCCTTTTATATTTTTT  895

seq1  TCAGATGTAACAATCCTCGGTCGATCTGAATTGCATATTGTTGTTTCAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATGTAACAATCCTCGGTCGATCTGAATTGCATATTGTTGTTTCAGC  945

seq1  TCTGGGATCCTTCCTGGAACCTTAGAATCCCCCTGTCTGGAGCTAAAAAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGATCCTTCCTGGAACCTTAGAATCCCCCTGTCTGGAGCTAAAAAG  995

seq1  GATGCTTCCAGGTCCCTACTGGCAGTATTGTACTGCAAAGGGCTTGTGTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTCCAGGTCCCTACTGGCAGTATTGTACTGCAAAGGGCTTGTGTA  1045

seq1  AATACTTGGCTTTATCGTTTCAATTTTACTAAATGATTTTCTTTAAGAGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTGGCTTTATCGTTTCAATTTTACTAAATGATTTTCTTTAAGAGT  1095

seq1  GATTCTCAGAGTGAAAATTTCAAGCAAAGTCAGATTAAGATCCTGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCAGAGTGAAAATTTCAAGCAAAGTCAGATTAAGATCCTGAATTC  1145

seq1: chr12_96933466_96933800
seq2: B6Ng01-251L23.g_72_406

seq1  ATTACAGTAAACATTTCCCAAGAGGGAGGGGGTGTCAGGTGAGGGTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTAAACATTTCCCAAGAGGGAGGGGGTGTCAGGTGAGGGTGGGG  50

seq1  GTGGAGACCTCGCTCCCAGCCTACATTAGCTGACCCGGTCGGATCAAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGACCTCGCTCCCAGCCTACATTAGCTGACCCGGTCGGATCAAGGC  100

seq1  TGCAGTGTGGCTGGAGCAGCCTCCAGCCCCGCGCCCCGCAGACGCTGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCAGTGTGGCTGGAGCAGCCTCCAGCCCCGCGCCCCGCAGACTCTGCAC  150

seq1  TTGGAGTCAGCCGCGCGCCCGCCCCCGCGCAGCCCGAACTGCACGCCCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTCAGCCGCGCGCCCGCCCCCGCGCAGCCCGAACTGCACGCCCGG  200

seq1  CTGCGCGTGGTCCGCGCCTTCTCTGCGACCGAGCTGGTTCCCCAAACCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCGTGGTCCGCGCCTTCTCTGCGACCGAGCTGGTTCCCCAAACCGA  250

seq1  CCCGCGTAGCCCTGGGTCTCTCGGCAGTCCGGGACTCGCTCGGACGCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCGTAGCCCTGGGTCTCTCGGCAGTCCGGGACTCGCTCGGACGCTCT  300

seq1  TCACCGCCCTCTTAGATCGCCCTACTTTTGTCGGG  335
      |||||||||||||||||||||||||||||||||||
seq2  TCACCGCCCTCTTAGATCGCCCTACTTTTGTCGGG  335