BAC Information

Click to search

BAC

Clone NameB6Ng01-251O11
Chromosome12 (Build37)
Map Location 79,032,452 - 79,179,725
singlet/doubletdoublet
Overlap genenone
Upstream geneMax, LOC100041765, LOC100041772, Fut8, LOC230765, LOC666659
Downstream geneEG626215, Gphn, 4921509E07Rik, Mpp5, Atp6v1d, LOC100041878, Eif2s1, Plek2, 6330442E10Rik, Plekhh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251O11.bB6Ng01-251O11.g
ACCGA059043GA059044
length1,1461,125
definitionB6Ng01-251O11.b B6Ng01-251O11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,178,583 - 79,179,725)(79,032,452 - 79,033,566)
sequence
gaattcacacaaaggtctgggaagcagagatggctgtgaataggttggcc
tggggaggagataatgagaagagctaacagatgctcgcatgggtattcct
acatagagcatctctcgggatccctgaaagggaggcctggttatcttcat
tgtatggattgtacatcagactatcagagaagaaaagcaatttttttcaa
ggctttcttgttcaccaggggtagagctgagatttgcactagtcaatcaa
atcctttcctctgtgcccctttgccttgggctggtccagacagatatacg
caatttatctataaagtagggaagcttagggagagttttggaccttgggg
atgcagctgaggagagggtaaggtgaataaacacgattcctcaccctgca
gcccaccctgcggtaatgtctgtgaagaggggaccagtggcaacatgatc
acccagcctacattcataagcccaagcctgacaccaaatgaatgctcttt
tcagtacgctttagcaataaaatattttattccacagctggaataaaaga
taataggtcttaaaatgggaaagcataacacattgtgaatcagtctgtta
atgtatgagaggactgtggcagggaagtgcttaaaggccaggcccttgag
gtgtcctgagagaaactgagcataatcacatccatcctcctgcttctagc
ccaggatgtgtgccctctcctccctaccagtcacatgcttacgcacattg
tacacaaccaaagtctcctgggaggcagttcctggccttttggatggccc
cacttgctctgcaaagtcaggactagttgtgttagctttctctagcttgt
catgagcaacactgctttccattttccaactcctggagagcctccctccc
tgcacttcctcctccaggcttgctaggccagtttgaggatgtatgcctac
cacaggtagaccatgatgattcttgctgagctgaggtttgtcaccctgtc
taggctgatgtctactagttcggtgtgtctggtcctggagtttctaccat
tcctgaccactggctacttccatgaactcttctttccaactctgaaccac
ctctattctgccagagagcctttccgaatgcagcctttacacaggg
gaattcttacctgaggaattccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggagatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatatagagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactatcggaggatcccgcaatacctctcctgggc
atatatccagaagatgttctaaccggtaagagggattcttatttctagag
gactcctctggactttaacgtgatgatttaattctgtctcgagatctcat
cagtatctgtaaccaggatggtcaaggatgtagccctaccaaatccattc
taagcagggacacgagaaggaggcagctatttctgaccttcttgaggtct
ggcattcggtgcttagggtgtctactgtactcacaaccatttgagcagca
ggacaataacttttccctttaagacaaaggcagatgatgcgaagggcctg
ttcctgggctatttcatcctcccctgagagccaagactcttctgaaccct
ttagtctgaggcaaaaatgtgagcagtctagtttccctcttcccctgaat
gaaggaagaccctgtattcccctgagtctctgtcatgttcatagtctttc
tttgtgggaacagaggagccagttggattagagctagattggaagttaaa
aatatgtcagatttttttttcaaagtactatatgccacttaatataaagt
caaataatattgtggaatacttaaaacagtatttcctaatacatctatgt
cacctcctccccatccctacctacttctgctcagaggcacattttaagtt
tgtatcattgctgaatttacctttctttccctggcctgtacaattcacat
ttctggtattgatactttattattgctgtttctcaaaccatcccaattta
gacactattaatttgacttctgttattcagagtccataaacccatgtcca
atgattcataggaggagatttatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_79178583_79179725
seq2: B6Ng01-251O11.b_44_1189 (reverse)

seq1  CCCT-TGTAAAAGCTGCATCTGGGAA-GCTC-CTGGCAG-ATAGAGGTTG  46
      |||| |||||| |||||||  || || |||| ||||||| |||||||| |
seq2  CCCTGTGTAAAGGCTGCATTCGGAAAGGCTCTCTGGCAGAATAGAGGTGG  50

seq1  TTCAGAGTTGGAA--GAGAGTCCATGGAAGTAAGCCAGTGGTCAGGAATG  94
      |||||||||||||   ||||| ||||||||| ||||||||||||||||||
seq2  TTCAGAGTTGGAAAGAAGAGTTCATGGAAGT-AGCCAGTGGTCAGGAATG  99

seq1  GTAGAAACT-CAGGACCAGACACAACCGAACTAGTAGACATCAAGCCTAG  143
      ||||||||| ||||||||||||| |||||||||||||||||| |||||||
seq2  GTAGAAACTCCAGGACCAGACAC-ACCGAACTAGTAGACATC-AGCCTAG  147

seq1  ACAGGGTGACAAAACCTCAGCTCAGCAAGAATCATCATGGTCTACCTGTG  193
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTGAC-AAACCTCAGCTCAGCAAGAATCATCATGGTCTACCTGTG  196

seq1  GTAGGCATACATCCTCAAACTGGCCTAGCAAGCCTGGAGGAGGAAGTGCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCATACATCCTCAAACTGGCCTAGCAAGCCTGGAGGAGGAAGTGCA  246

seq1  GGGAGGGAGGCTCTCCAGGAGTTGGAAAATGGAAAGCAGTGTTGCTCATG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGCTCTCCAGGAGTTGGAAAATGGAAAGCAGTGTTGCTCATG  296

seq1  ACAAGCTAGAGAAAGCTAACACAACTAGTCCTGACTTTGCAGAGCAAGTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTAGAGAAAGCTAACACAACTAGTCCTGACTTTGCAGAGCAAGTG  346

seq1  GGGCCATCCAAAAGGCCAGGAACTGCCTCCCAGGAGACTTTGGTTGTGTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCATCCAAAAGGCCAGGAACTGCCTCCCAGGAGACTTTGGTTGTGTA  396

seq1  CAATGTGCGTAAGCATGTGACTGGTAGGGAGGAGAGGGCACACATCCTGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGCGTAAGCATGTGACTGGTAGGGAGGAGAGGGCACACATCCTGG  446

seq1  GCTAGAAGCAGGAGGATGGATGTGATTATGCTCAGTTTCTCTCAGGACAC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAGCAGGAGGATGGATGTGATTATGCTCAGTTTCTCTCAGGACAC  496

seq1  CTCAAGGGCCTGGCCTTTAAGCACTTCCCTGCCACAGTCCTCTCATACAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGGCCTGGCCTTTAAGCACTTCCCTGCCACAGTCCTCTCATACAT  546

seq1  TAACAGACTGATTCACAATGTGTTATGCTTTCCCATTTTAAGACCTATTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGACTGATTCACAATGTGTTATGCTTTCCCATTTTAAGACCTATTA  596

seq1  TCTTTTATTCCAGCTGTGGAATAAAATATTTTATTGCTAAAGCGTACTGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTCCAGCTGTGGAATAAAATATTTTATTGCTAAAGCGTACTGA  646

seq1  AAAGAGCATTCATTTGGTGTCAGGCTTGGGCTTATGAATGTAGGCTGGGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCATTCATTTGGTGTCAGGCTTGGGCTTATGAATGTAGGCTGGGT  696

seq1  GATCATGTTGCCACTGGTCCCCTCTTCACAGACATTACCGCAGGGTGGGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGTTGCCACTGGTCCCCTCTTCACAGACATTACCGCAGGGTGGGC  746

seq1  TGCAGGGTGAGGAATCGTGTTTATTCACCTTACCCTCTCCTCAGCTGCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGGTGAGGAATCGTGTTTATTCACCTTACCCTCTCCTCAGCTGCAT  796

seq1  CCCCAAGGTCCAAAACTCTCCCTAAGCTTCCCTACTTTATAGATAAATTG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGGTCCAAAACTCTCCCTAAGCTTCCCTACTTTATAGATAAATTG  846

seq1  CGTATATCTGTCTGGACCAGCCCAAGGCAAAGGGGCACAGAGGAAAGGAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATATCTGTCTGGACCAGCCCAAGGCAAAGGGGCACAGAGGAAAGGAT  896

seq1  TTGATTGACTAGTGCAAATCTCAGCTCTACCCCTGGTGAACAAGAAAGCC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGACTAGTGCAAATCTCAGCTCTACCCCTGGTGAACAAGAAAGCC  946

seq1  TTGAAAAAAATTGCTTTTCTTCTCTGATAGTCTGATGTACAATCCATACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAATTGCTTTTCTTCTCTGATAGTCTGATGTACAATCCATACA  996

seq1  ATGAAGATAACCAGGCCTCCCTTTCAGGGATCCCGAGAGATGCTCTATGT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGATAACCAGGCCTCCCTTTCAGGGATCCCGAGAGATGCTCTATGT  1046

seq1  AGGAATACCCATGCGAGCATCTGTTAGCTCTTCTCATTATCTCCTCCCCA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATACCCATGCGAGCATCTGTTAGCTCTTCTCATTATCTCCTCCCCA  1096

seq1  GGCCAACCTATTCACAGCCATCTCTGCTTCCCAGACCTTTGTGTGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACCTATTCACAGCCATCTCTGCTTCCCAGACCTTTGTGTGAATTC  1146

seq1: chr12_79032452_79033566
seq2: B6Ng01-251O11.g_70_1194

seq1  GAATTCTTACCTGAGGAATTCCGAATGGCTGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTGAGGAATTCCGAATGGCTGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAGATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAGATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCAAGGATATAGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCAAGGATATAGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250

seq1  GAAAATTGGACATAGTACTATCGGAGGATCCCGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTACTATCGGAGGATCCCGCAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGATGTTCTAACCGGTAAGAGGGATTCTTATTTCTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGATGTTCTAACCGGTAAGAGGGATTCTTATTTCTAGAG  350

seq1  GACTCCTCTGGACTTTAACGTGATGATTTAATTCTGTCTCGAGATCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTCTGGACTTTAACGTGATGATTTAATTCTGTCTCGAGATCTCAT  400

seq1  CAGTATCTGTAACCAGGATGGTCAAGGATGTAGCCCTACCAAATCCATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATCTGTAACCAGGATGGTCAAGGATGTAGCCCTACCAAATCCATTC  450

seq1  TAAGCAGGGACACGAGAAGGAGGCAGCTATTTCTGACCTTCTTGAGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGGGACACGAGAAGGAGGCAGCTATTTCTGACCTTCTTGAGGTCT  500

seq1  GGCATTCGGTGCTTAGGGTGTCTACTGTACTCACAACCATTTGAGCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTCGGTGCTTAGGGTGTCTACTGTACTCACAACCATTTGAGCAGCA  550

seq1  GGACAATAACTTTTCCCTTTAAGACAAAGGCAGATGATGCGAAGGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAATAACTTTTCCCTTTAAGACAAAGGCAGATGATGCGAAGGGCCTG  600

seq1  TTCCTGGGCTATTTCATCCTCCCCTGAGAGCCAAGACTCTTCTGAACCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGGCTATTTCATCCTCCCCTGAGAGCCAAGACTCTTCTGAACCCT  650

seq1  TTAGTCTGAGGCAAAAATGTGAGCAGTCTAGTTTCCCTCTTCCCCTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTGAGGCAAAAATGTGAGCAGTCTAGTTTCCCTCTTCCCCTGAAT  700

seq1  GAAGGAAGACCCTGTATTCCCCTGAGTCTCTGTCATGTTCATAGTCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGACCCTGTATTCCCCTGAGTCTCTGTCATGTTCATAGTCTTTC  750

seq1  TTTGTGGGAACAGAGGAGCCAGTTGGATTAGAGCTAGATTGGAAGTTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGAACAGAGGAGCCAGTTGGATTAGAGCTAGATTGGAAGTTAAA  800

seq1  AATATGTCAGA-TTTTTTTTCAAAGTACTATATGCCACTTAATATAAAGT  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATATGTCAGATTTTTTTTTCAAAGTACTATATGCCACTTAATATAAAGT  850

seq1  CAAATAATATTGTGGAATACTTAAAACAGTATTTCCTAATACATCTATGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATATTGTGGAATACTTAAAACAGTATTTCCTAATACATCTATGT  900

seq1  CACCTCCTCCCCATCCCTACCTACTTCTGCTCAGAGGCACATTTTAAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTCCCCATCCCTACCTACTTCTGCTCAGAGGCACATTTTAAGTT  950

seq1  TGTATCATTGCTGAA-TTACCTTTCTTT-CCTGGCCTGTAC-ATTCACAT  996
      ||||||||||||||| |||||||||||| |||||||||||| ||||||||
seq2  TGTATCATTGCTGAATTTACCTTTCTTTCCCTGGCCTGTACAATTCACAT  1000

seq1  TTCT-GTA-TGATACTT--ATATTGCTGTTTCTCAAACCAT-CCAATTTA  1041
      |||| ||| ||||||||   ||||||||||||||||||||| ||||||||
seq2  TTCTGGTATTGATACTTTATTATTGCTGTTTCTCAAACCATCCCAATTTA  1050

seq1  GACACTATTAA-TTGACTTCTGT--ATCAGAGTCCATAAACCCATGCCAA  1088
      ||||||||||| |||||||||||   |||||||||||||||||||| | |
seq2  GACACTATTAATTTGACTTCTGTTATTCAGAGTCCATAAACCCATGTCCA  1100

seq1  ATGATTCCATAGAGGAAGATTTTATAT  1115
      |||||| |||||  | ||| |||||||
seq2  ATGATT-CATAGGAGGAGA-TTTATAT  1125