BAC Information

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BAC

Clone NameB6Ng01-252N21
Chromosome12 (Build37)
Map Location 3,062,927 - 3,064,097
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668260, LOC668262
Downstream geneLOC668267, LOC668270, EG668274, LOC100041946, 1700012B15Rik, Rab10, Kif3c, LOC100043040, Asxl2, LOC627245, Dtnb, LOC668197, Dnmt3a, LOC668289, Pomc1, C030014M07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252N21.bB6Ng01-252N21.g
ACCGA059748GA059749
length1,1761,191
definitionB6Ng01-252N21.b B6Ng01-252N21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagacctgataggtttttctgtgactgtggtactggaacact
gtccaatccttgtacattagctggtgagcctacacaggatacagataacg
ttatatgactctgctctgcctgtaacatctaatatgttgcagaacaattg
aattccttccgtaaagaaaaagtcctgctattcaaacataacttaaaaca
tctttgggaagataaaatacttgcccgtgctacagaatgagactctactg
agaaaaatggatacacaaggtcagttgtcactatgaaactcaagctacca
aaaggaagtggcaatatattgacttaggatctcagagctcgggattttag
cattactgcataaaaagttttgaagggacagaagtgaagaaataagccac
acttttgtacagataccaacttctgaaaacgttggtgtctttacaatgag
cattaaatgcagtctgatttgcagtagtaatcttcaatagataagttgct
ttgttgctgcctttatggacatgggtatcaattgcttttggtaatatggt
aaaaatgtgagctagcacttctgcattgattttataacatgtattcagat
tgagaatgtgattttaatgcttaaacctcatggagtttgtttttaatttc
aaacacatcttattgtgcttgaatgtgccctggtttgttagcacacctag
acttgctgtaactgcacttcttactcgcgttctcacgaccggccaggaaa
ggacacaacaaaccagaatcttctgcggcaaaactttattgcttacatct
tcaggagccaggagcgcaaacccccagccccaaaagcgaaagccacccca
ataacatctttaggagccagagctccggcgcgccaaagcgcagagcgcgc
tctattgtttacatctttaggcagcgagagagcgcagggcgcgcagagcc
agagagatgccagcgagagagaatggcggaaaaccccgtcccccttaagg
aggagttatatttcgcctagacgcatcacctccctgattggctgcagccc
atggccgagctgacgttcacgggaaaaggcagaagttacagtaggtcgta
aaatacctttggacaatgcgccagaattattgtttaccactagaacacat
ggatgtcacgcgccatcttgtgacgg
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgcgcag
agagatgcgcagagaggcagtgcgcagagaggcagtgcgcagagaggcag
tgcgcagactcattcattcccagagaggaacaaaggaaaatacaacaggc
atttccagtctttgaaggagccgagggtgggcgtgtccacgctccggtag
aatacttacaaattaaagaactcgccgagtcggtccgtaaatacggaacc
aatgctaattttaccttggtgcagttagacaggcatggcactaactcctg
ctgactggcaaacggttgtaaaagccgctctccctagtatgggcaaatat
atggaatggagagctctttggcatgaaactgcacaagcgcaggcccgagc
aaacgcagctgctttgactccagagcagagagattggacttttgacttgt
taacgggtcagggagcttattctgctgatcaaacaaactaccattgggga
gcttatgcccagatttcttccacggctattagggcctggaaggcgctctc
ccgagcaggtgaaaccactggtcaattaacaaaagttgtccagggacctc
aggaatccttctcagattttgtggccagaatgacagaggcagcagagcgt
atttttggagattcagagcaagccacgcctctggtagaacagctaatcta
tgagcaagccaacaaaggagtgccgagcggccatagccccaagaaagaac
aaagggcttacagactggctcaggtctgtcgagagcttgggggacctctc
acatgcagcttagcggccgcatccttcaatctcagaaccgctccatggca
gaaatgatcagaggacatgtttattggcgaagcctgggcatttagaaaga
tgcagagctcagataaacagagaacctctcactctttgcctaagttggca
aggtctctattaggaaagcgtcgaaactcagtagtcgtggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_3062927_3064097
seq2: B6Ng01-252N21.b_45_1220 (reverse)

seq1  CCGTCACAAGATGGCGC-TGACATCC-TGTGTTCTAAGTGGTAAACAAAT  48
      ||||||||||||||||| |||||||| |||||||| ||||||||||||  
seq2  CCGTCACAAGATGGCGCGTGACATCCATGTGTTCT-AGTGGTAAACAATA  49

seq1  AATCT-GCGCATGTGCCAAGGGTATTTTACGA-CTACTTGTAC-TCTGCC  95
      | ||| ||||||   |||| |||||||||||| |||||   || ||||||
seq2  ATTCTGGCGCATTGTCCAAAGGTATTTTACGACCTACTGTAACTTCTGCC  99

seq1  -TTTCCCGTGAACGTCAGCTCGGCCATGGGCTGCAGCCAATCAGGGA-GT  143
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTTTCCCGTGAACGTCAGCTCGGCCATGGGCTGCAGCCAATCAGGGAGGT  149

seq1  GATGCGTCCTAGGCGAAATATAACTCCTCCTTAAGGGGGACGGGGTTTTC  193
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCGT-CTAGGCGAAATATAACTCCTCCTTAAGGGGGACGGGGTTTTC  198

seq1  CGCCATTCTCTCTCGCTGGCATCTCTCTGGCTCTGCGCGCCCTGCGCTCT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATTCTCTCTCGCTGGCATCTCTCTGGCTCTGCGCGCCCTGCGCTCT  248

seq1  CTCGCTGCCTAAAGATGTAAACAATAGAGCGCGCTCTGCGCTTTGGCGCG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCTGCCTAAAGATGTAAACAATAGAGCGCGCTCTGCGCTTTGGCGCG  298

seq1  CCGGAGCTCTGGCTCCTAAAGATGTTATTGGGGTGGCTTTCGCTTTTGGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGAGCTCTGGCTCCTAAAGATGTTATTGGGGTGGCTTTCGCTTTTGGG  348

seq1  GCTGGGGGTTTGCGCTCCTGGCTCCTGAAGATGTAAGCAATAAAGTTTTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGGTTTGCGCTCCTGGCTCCTGAAGATGTAAGCAATAAAGTTTTG  398

seq1  CCGCAGAAGATTCTGGTTTGTTGTGTCCTTTCCTGGCCGGTCGTGAGAAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGAAGATTCTGGTTTGTTGTGTCCTTTCCTGGCCGGTCGTGAGAAC  448

seq1  GCGAGTAAGAAGTGCAGTTACAGCAAGTCTAGGTGTGCTAACAAACCAGG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGTAAGAAGTGCAGTTACAGCAAGTCTAGGTGTGCTAACAAACCAGG  498

seq1  GCACATTCAAGCACAATAAGATGTGTTTGAAATTAAAAACAAACTCCATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTCAAGCACAATAAGATGTGTTTGAAATTAAAAACAAACTCCATG  548

seq1  AGGTTTAAGCATTAAAATCACATTCTCAATCTGAATACATGTTATAAAAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTAAGCATTAAAATCACATTCTCAATCTGAATACATGTTATAAAAT  598

seq1  CAATGCAGAAGTGCTAGCTCACATTTTTACCATATTACCAAAAGCAATTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAGAAGTGCTAGCTCACATTTTTACCATATTACCAAAAGCAATTG  648

seq1  ATACCCATGTCCATAAAGGCAGCAACAAAGCAACTTATCTATTGAAGATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCATGTCCATAAAGGCAGCAACAAAGCAACTTATCTATTGAAGATT  698

seq1  ACTACTGCAAATCAGACTGCATTTAATGCTCATTGTAAAGACACCAACGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGCAAATCAGACTGCATTTAATGCTCATTGTAAAGACACCAACGT  748

seq1  TTTCAGAAGTTGGTATCTGTACAAAAGTGTGGCTTATTTCTTCACTTCTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAGTTGGTATCTGTACAAAAGTGTGGCTTATTTCTTCACTTCTG  798

seq1  TCCCTTCAAAACTTTTTATGCAGTAATGCTAAAATCCCGAGCTCTGAGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCAAAACTTTTTATGCAGTAATGCTAAAATCCCGAGCTCTGAGAT  848

seq1  CCTAAGTCAATATATTGCCACTTCCTTTTGGTAGCTTGAGTTTCATAGTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTCAATATATTGCCACTTCCTTTTGGTAGCTTGAGTTTCATAGTG  898

seq1  ACAACTGACCTTGTGTATCCATTTTTCTCAGTAGAGTCTCATTCTGTAGC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGACCTTGTGTATCCATTTTTCTCAGTAGAGTCTCATTCTGTAGC  948

seq1  ACGGGCAAGTATTTTATCTTCCCAAAGATGTTTTAAGTTATGTTTGAATA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGCAAGTATTTTATCTTCCCAAAGATGTTTTAAGTTATGTTTGAATA  998

seq1  GCAGGACTTTTTCTTTACGGAAGGAATTCAATTGTTCTGCAACATATTAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACTTTTTCTTTACGGAAGGAATTCAATTGTTCTGCAACATATTAG  1048

seq1  ATGTTACAGGCAGAGCAGAGTCATATAACGTTATCTGTATCCTGTGTAGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTACAGGCAGAGCAGAGTCATATAACGTTATCTGTATCCTGTGTAGG  1098

seq1  CTCACCAGCTAATGTACAAGGATTGGACAGTGTTCCAGTACCACAGTCAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGCTAATGTACAAGGATTGGACAGTGTTCCAGTACCACAGTCAC  1148

seq1  AGAAAAACCTATCAGGTCTAATGAATTC  1171
      ||||||||||||||||||||||||||||
seq2  AGAAAAACCTATCAGGTCTAATGAATTC  1176