BAC Information

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BAC

Clone NameB6Ng01-255K13
Chromosome12 (Build37)
Map Location 68,749,590 - 68,750,760
singlet/doubletsinglet
Overlap genenone
Upstream geneMdga2, LOC100040745
Downstream geneLOC100040681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K13.bB6Ng01-255K13.g
ACCGA061814GA061815
length1,1521,169
definitionB6Ng01-255K13.b B6Ng01-255K13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttatctatttcaactcctccaaagaatccactagaggagaag
tcatgagtaaacatgtttttgtggtggcttagtcctgtgctgcctggggt
tgcccgctgcagctgttggatagtccttctttgagaaattgattgctcac
ttgaggctgttgaattacctctattatttgagggacctgaggtggtaggt
ccttcacagtttccctggtttgataaaatttctgtattattagggattac
agtagcaccagataaggtactaatattttatgaaggttagtttggcactc
tttatgccagtggtaacctttcagacaatgacacaccctattggatttct
tgagtgggaccaggagcattaaaatgcatggcacttcctgccttaccagg
acattgtttgctgataagtccaggcttcttacttgaacaacttttgcgag
ccaagcctgatttattaaatgtcttttgtccttgccttgtgaggttgttg
taatgggtacaccgtgaaaataggaagtagcaaccttaacacacgcttta
aataaattttcagatttttaaaattgtcttcagaagagactgacaagcaa
gtgcagcattctcaaaggccagttattttaaaacaatatcttttgcgtca
gagctaagcactcttttcttttcttttcttttcttttcttttcttctttt
ttttaagttgagcaacagattcctcagaaagtttttctggtttatgtact
atattagcaagtcttttgagttctatatctctgttaggcaagcgtctcca
ggattccagggctgcagttgatattttttcttagagcttcctttgtcatt
tttttttttttttgttgagctgtttcttcaaaccactcccaagtacccat
aagcatttcatatgttaactctttcattcccctcttattttcagacatct
tacataactctttttgagcagttcatatatatatatatatatatatatat
atctccacagtacattcatctttcatgaaataggctctggctatttaaca
atcacgagggattcattagcagttaatgcaagttcctataggatcttatc
ctcttagtattccttaatctactgtaaacggctagacttaacctgttgcg
ga

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaaatggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgacccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacttggaaggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgatc
ccagatgtagctgtctcttgtgagactatgccggggcctagcaaacacag
aagtggatgctcacagtcagctaatggatggatcatagggctcctaatgg
aggagctagaagaaagtagccaggagctaaagggatctgcaccctatagg
tggacacattatgactaccagtaccccggagctctgactctagctgcata
tatatcaaagatggcctagtcgcatcactggcaagagaggccattgaact
gccacctttaatgccagtaaggaccagctaaaggggatgggtggcaggga
acggggtcttacttacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_68749590_68750760
seq2: B6Ng01-255K13.b_45_1196 (reverse)

seq1  TCCGCAACAGGGTAAAGTGCTAGGCTGTTTACCAGTGAGTATAGAGAATA  50
      ||||||||| ||| |||| ||| || ||||| |||| ||  ||  |||| 
seq2  TCCGCAACA-GGTTAAGT-CTA-GCCGTTTA-CAGT-AGATTAAGGAAT-  44

seq1  ACTAAGAGGATAAGGATCCCTTATAGGAACCTTTGGCATTTAAACTGCTT  100
      ||||||||||||| |||||  |||||||||   | |||||  ||||||| 
seq2  ACTAAGAGGATAA-GATCC--TATAGGAAC---TTGCATT--AACTGCTA  86

seq1  ATG-ATCCCTCGTGATTGGTTTAAAATAGCCAGAGCCTATCTCATGAAAG  149
      ||| ||||||||||||||   | ||||||||||||||||| |||||||||
seq2  ATGAATCCCTCGTGATTG---TTAAATAGCCAGAGCCTATTTCATGAAAG  133

seq1  ATGAATTGTTACTGTGGAGATATATATATATATATATATATATATATGAA  199
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAT--GTACTGTGGAGATATATATATATATATATATATATATATGAA  181

seq1  CTTGGCTCAAAAAGAGTTATGTAAGATGTCTGAAAATAAGAGGGGAATGA  249
      ||  ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT--GCTCAAAAAGAGTTATGTAAGATGTCTGAAAATAAGAGGGGAATGA  229

seq1  AAGAGTTAACATATGAAATGCTTATGGGTACTTGGGAGTGGTTTGAAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTAACATATGAAATGCTTATGGGTACTTGGGAGTGGTTTGAAGAA  279

seq1  ACAGCTCAAC-AAAAAAAAAAAAAATGACAAAGGAAGCTCTAAGAAAAAA  348
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCAACAAAAAAAAAAAAAAATGACAAAGGAAGCTCTAAGAAAAAA  329

seq1  TATCAACTGCAGCCCTGGAATCCTGGAGACGCTTGCCTAACAGAGATATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACTGCAGCCCTGGAATCCTGGAGACGCTTGCCTAACAGAGATATA  379

seq1  GAACTCAAAAGACTTGCTAATATAGTACATAAACCAGAAAAACTTTCTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAAAAGACTTGCTAATATAGTACATAAACCAGAAAAACTTTCTGA  429

seq1  GGAATCTGTTGCTCAACTTAAAAAAAAGAAGAAAAGAAAAGAAAAGAAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTGTTGCTCAACTTAAAAAAAAGAAGAAAAGAAAAGAAAAGAAAA  479

seq1  GAAAAGAAAAGAGTGCTTAGCTCTGACGCAAAAGATATTGTTTTAAAATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAGAGTGCTTAGCTCTGACGCAAAAGATATTGTTTTAAAATA  529

seq1  ACTGGCCTTTGAGAATGCTGCACTTGCTTGTCAGTCTCTTCTGAAGACAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTTTGAGAATGCTGCACTTGCTTGTCAGTCTCTTCTGAAGACAA  579

seq1  TTTTAAAAATCTGAAAATTTATTTAAAGCGTGTGTTAAGGTTGCTACTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATCTGAAAATTTATTTAAAGCGTGTGTTAAGGTTGCTACTTC  629

seq1  CTATTTTCACGGTGTACCCATTACAACAACCTCACAAGGCAAGGACAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCACGGTGTACCCATTACAACAACCTCACAAGGCAAGGACAAAA  679

seq1  GACATTTAATAAATCAGGCTTGGCTCGCAAAAGTTGTTCAAGTAAGAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTAATAAATCAGGCTTGGCTCGCAAAAGTTGTTCAAGTAAGAAGC  729

seq1  CTGGACTTATCAGCAAACAATGTCCTGGTAAGGCAGGAAGTGCCATGCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTTATCAGCAAACAATGTCCTGGTAAGGCAGGAAGTGCCATGCAT  779

seq1  TTTAATGCTCCTGGTCCCACTCAAGAAATCCAATAGGGTGTGTCATTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCTCCTGGTCCCACTCAAGAAATCCAATAGGGTGTGTCATTGTC  829

seq1  TGAAAGGTTACCACTGGCATAAAGAGTGCCAAACTAACCTTCATAAAATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGTTACCACTGGCATAAAGAGTGCCAAACTAACCTTCATAAAATA  879

seq1  TTAGTACCTTATCTGGTGCTACTGTAATCCCTAATAATACAGAAATTTTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACCTTATCTGGTGCTACTGTAATCCCTAATAATACAGAAATTTTA  929

seq1  TCAAACCAGGGAAACTGTGAAGGACCTACCACCTCAGGTCCCTCAAATAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACCAGGGAAACTGTGAAGGACCTACCACCTCAGGTCCCTCAAATAA  979

seq1  TAGAGGTAATTCAACAGCCTCAAGTGAGCAATCAATTTCTCAAAGAAGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGTAATTCAACAGCCTCAAGTGAGCAATCAATTTCTCAAAGAAGGA  1029

seq1  CTATCCAACAGCTGCAGCGGGCAACCCCAGGCAGCACAGGACTAAGCCAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAACAGCTGCAGCGGGCAACCCCAGGCAGCACAGGACTAAGCCAC  1079

seq1  CACAAAAACATGTTTACTCATGACTTCTCCTCTAGTGGATTCTTTGGAGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAACATGTTTACTCATGACTTCTCCTCTAGTGGATTCTTTGGAGG  1129

seq1  AGTTGAAATAGATAAAAGAATTC  1171
      |||||||||||||||||||||||
seq2  AGTTGAAATAGATAAAAGAATTC  1152


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