BAC Information

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BAC

Clone NameB6Ng01-256H07
Chromosome12 (Build37)
Map Location 68,237,273 - 68,237,945
singlet/doubletsinglet
Overlap geneMdga2
Upstream geneLOC100040700, EG238217
Downstream geneLOC100040745, LOC100040681
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256H07.bB6Ng01-256H07.g
ACCGA062411GA062412
length1,180673
definitionB6Ng01-256H07.b B6Ng01-256H07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatatattggatattaatcccctatccgatttgggatagg
taaagatcctttcccaatctgttggtggcctttttgtcttattgacggtg
tcttttgctttgcagaagctttgcaattttatgaggtccgatttatcaat
tcttgatcttacagcacaagccattgctgttctattcaggaatttttccc
ctgtacccatatcttcgaggcttttccctactttctcctctataagtttc
agtgtctctggttttatgtggagttccttaatccacttagatttgacctt
agtacaaggagatagaaatggatcaattcgcattcttctacatgataacc
gccagttgtaccagcaccatttgttgaaaatgctgtcttttttccactgg
atggttttagctcccttgtcaaagatcaggtgaccataggtgtgtgggtt
catttctgggtcttcaattctgttccattggtctacttgtctgtcactat
accagtaccgtgcagttttgatcacaattgctctgcagtacagttttaga
accggcatggtgattccaccagaggttcttttatccttgagaagagtttt
tgctatccttggttttttgttattccagatgaatctgccgattgcccttt
ctaattcattgaagaattgagttggaattttgatggggattgcatcgaat
ctgtagaatgcttttggcaagatagccatttttacaatgttgatcctgcc
aatccatgagcatgggagatctttccatcttctgagatcttctttaattt
ctttctttagagacttgaagttcttatcatacagatctttcacttccttt
ttagagtcacgccaaaggtattttatattatttgtgactattgagaaagg
gtgttgtttccctaatttctttctcagcctgtttattttttgtgtacaga
aaggccattgacttgtttgagttaattttatatccagctacttcattgaa
gctgtttatcagcttaggagttctctggtggattttttagggtcacttat
atatactatcataatcattctgccaaaaagtgatatttgacttcctcttt
catttgaatccccatggaattcccttgatgctatgccttgctaggtactt
caaagatacaatatttggaaatagagctag
gaattctctataatgatttttatagtacctgcatcagattgcaatccaat
caacagttaatgagaaacgtctcccacacatctttacaggtatttgatgt
tagtaattttcttggggttggtcatcatgacctgtgaggaatgaaacctg
taagtagtttaatttgtatatctctaattgctaaagatgttgatcacatt
taaaaagagtatttcatggtggtttttatttcttcttttgagaactctct
gttgaaatcaatagcccatttttaaactggatcatttgttttctcgagat
tgtgttctttgagtttttaaataatctggatattaatcttctaagagatg
tatagctagcaaagagacccttcctactctgcaggcttcctttacactta
gttgtttctctttctgtagaaaagctctcagtgacgtcctatctatggga
ccacagtggggagaatctctagagaggaatacaatgagacataggtccta
tgaagggaaaacaggattactttgcttggaggaggagagggagggtagta
agtacacggggagggtacagctggaaaataccactaaggacacttgaaaa
agccataattgaaaaattattttctacttacttaaagcacatatgagtga
atatgaatgtatggtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_68237273_68237945
seq2: B6Ng01-256H07.g_61_733

seq1  GAATTCTCTATAATGATTTTTATAGTACCTGCATCAGATTGCAATCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATAATGATTTTTATAGTACCTGCATCAGATTGCAATCCAAT  50

seq1  CAACAGTTAATGAGAAACGTCTCCCACACATCTTTACAGGTATTTGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGTTAATGAGAAACGTCTCCCACACATCTTTACAGGTATTTGATGT  100

seq1  TAGTAATTTTCTTGGGGTTGGTCATCATGACCTGTGAGGAATGAAACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTTCTTGGGGTTGGTCATCATGACCTGTGAGGAATGAAACCTG  150

seq1  TAAGTAGTTTAATTTGTATATCTCTAATTGCTAAAGATGTTGATCACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGTTTAATTTGTATATCTCTAATTGCTAAAGATGTTGATCACATT  200

seq1  TAAAAAGAGTATTTCATGGTGGTTTTTATTTCTTCTTTTGAGAACTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGTATTTCATGGTGGTTTTTATTTCTTCTTTTGAGAACTCTCT  250

seq1  GTTGAAATCAATAGCCCATTTTTAAACTGGATCATTTGTTTTCTCGAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAATCAATAGCCCATTTTTAAACTGGATCATTTGTTTTCTCGAGAT  300

seq1  TGTGTTCTTTGAGTTTTTAAATAATCTGGATATTAATCTTCTAAGAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTTTGAGTTTTTAAATAATCTGGATATTAATCTTCTAAGAGATG  350

seq1  TATAGCTAGCAAAGAGACCCTTCCTACTCTGCAGGCTTCCTTTACACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTAGCAAAGAGACCCTTCCTACTCTGCAGGCTTCCTTTACACTTA  400

seq1  GTTGTTTCTCTTTCTGTAGAAAAGCTCTCAGTGACGTCCTATCTATGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTCTCTTTCTGTAGAAAAGCTCTCAGTGACGTCCTATCTATGGGA  450

seq1  CCACAGTGGGGAGAATCTCTAGAGAGGAATACAATGAGACATAGGTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGGGGAGAATCTCTAGAGAGGAATACAATGAGACATAGGTCCTA  500

seq1  TGAAGGGAAAACAGGATTACTTTGCTTGGAGGAGGAGAGGGAGGGTAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAAAACAGGATTACTTTGCTTGGAGGAGGAGAGGGAGGGTAGTA  550

seq1  AGTACACGGGGAGGGTACAGCTGGAAAATACCACTAAGGACACTTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACACGGGGAGGGTACAGCTGGAAAATACCACTAAGGACACTTGAAAA  600

seq1  AGCCATAATTGAAAAATTATTTTCTACTTACTTAAAGCACATATGAGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATAATTGAAAAATTATTTTCTACTTACTTAAAGCACATATGAGTGA  650

seq1  ATATGAATGTATGGTGTGGGGGG  673
      |||||||||||||||||||||||
seq2  ATATGAATGTATGGTGTGGGGGG  673