BAC Information

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BAC

Clone NameB6Ng01-259D01
Chromosome12 (Build37)
Map Location 48,926,896 - 48,927,946
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039190, EG664891
Downstream geneGm1818
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259D01.bB6Ng01-259D01.g
ACCGA064438GA064439
length1,0591,172
definitionB6Ng01-259D01.b B6Ng01-259D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagcaaggtttggttaagtttcctttccctaatacagatgtga
atataatcatttataaagtgtgtttccacctagaacattagggttagagt
gaagtgatcatgggtctgttctttttgccagtagatgaaaaggaatatgg
tacctggagaactttgataatataacaattgtttcacttgcatgagaaca
ctgaactatcttcagcccttttcacatctaagtatagtaaattcttgttg
ttcattctaactgaacctcagacagaattcttttgttaactgaatctctt
tggtaattctggtaatgaaaaatactatatttaaattaataccacttata
ttttcactttttgaaaatcatgcccttctccagcaatatactttcatttt
actactctctatttgtcactatttagttgattccaagaactgctggtata
tagatataatgcattagaaaaataaatgtttccagataactattacttta
actatatttcaaaattatttttttaactttttctcatattaggtagttaa
ttcttttttaaaaatgttttattaggtattttcctcatttacatttcgaa
tgctatcccaaaagttccccataccctccccctgactcccatacccccta
ctcccacctcccggccctggcgttcccctgcactgaggcagataaagttt
gcacgaccaatgggcctctctttccattgatggccagctaggaaattctg
atacatatgcagctagagacacgagttccagggggtactggtcagtccat
actgttgttccacctatagggttgcagatccccctagctccttggataat
ttctccagctcctccactgggggccctgtgatccatccaacagctggctg
tgagcatccacctctgtgtctgccaggccctggtatagtctcacaagaga
caactatatcaggtactttcagcaaaatcttgctagtgtatgcaatggtg
gcactgcttgaagctgattatgggatgggatccccggatatggcagtgtc
taagaatgg
gaattccagttttgtgtttgatgccaaatttttacaaaatgaagtaaaat
ttttactagaatatgatggcccattatctgtcttagtaagtttaggcagt
cccatggcattaaaggcttataggaagtgatcaattatgtttttagaagc
ctctcctctatgcagagaagcaaaaagacatcctgaacaggtatcgatac
aaacatgtatatattttaattttccaaattccacataatgagttacatcc
atttgccaaatatgattaggcataaaacctctaggattgcctcctaaatg
tggcactggagataatgtaatacatttaggacattggtttacaatcattc
tcacttgctccttagtgatcttatgtcggagccttaaggtatggttagag
agatgaaacttttcatgatcacgtttggccaaagtaacaggatccaaaat
taaggcttctcctattagagctctgtcagtgcaatcattgccttcagcta
aaggtccaggaagaccagagtgagattgtatgtggccaatataaaccgga
tttttccaggcaagaatgatgttttgcaattttgaaaacaaggatcctga
tagcgtattaaagttaaacgtaccacaggtctccaataagggtactgatt
gtgcaacatataaactatcagtaaagatattaaaagcctcatgtacagac
tgaaagactttcagtactgctgttaattgggcttactgagccaaaagggc
aggagtatctatgataacttggtgaatattaataagatatccagctagcc
ctttagaggagccatcagtaaaaatcaatagagcattatataaaggctat
aaggaagtcattttaggaaatatcacctcatgtacatttaaaatttttat
caacctatcttggagtagtggctgtctatagttccgttaaaccctacttg
tgcaagcaaccaatccgtactatttctgtaactgaaacttgctgttcagc
cagtatcttgacttagctgtaagctgaaaaataatatctgcttctttgcc
aaaaataagttagtgctgcctctcagtgatagtcaatctgcaatgcttca
ttatatgcaagaaatacgttagaaaaatctgactaatccacatagagtga
ctttttgtcccccattagacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_48926896_48927946
seq2: B6Ng01-259D01.b_46_1095

seq1  GAATTCACAGCAAGGTTTGGTTAAGTTTCCTTTCCCTAATACAGATGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGCAAGGTTTGGTTAAGTTTCCTTTCCCTAATACAGATGTGA  50

seq1  ATATAATCATTTATAAAGTGTGTTTCCACCTAGAACATTAGGGTTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCATTTATAAAGTGTGTTTCCACCTAGAACATTAGGGTTAGAGT  100

seq1  GAAGTGATCATGGGTCTGTTCTTTTTGCCAGTAGATGAAAAGGAATATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGATCATGGGTCTGTTCTTTTTGCCAGTAGATGAAAAGGAATATGG  150

seq1  TACCTGGAGAACTTTGATAATATAACAATTGTTTCACTTGCATGAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGAGAACTTTGATAATATAACAATTGTTTCACTTGCATGAGAACA  200

seq1  CTGAACTATCTTCAGCCCTTTTCACATCTAAGTATAGTAAATTCTTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTATCTTCAGCCCTTTTCACATCTAAGTATAGTAAATTCTTGTTG  250

seq1  TTCATTCTAACTGAACCTCAGACAGAATTCTTTTGTTAACTGAATCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTAACTGAACCTCAGACAGAATTCTTTTGTTAACTGAATCTCTT  300

seq1  TGGTAATTCTGGTAATGAAAAATACTATATTTAAATTAATACCACTTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTCTGGTAATGAAAAATACTATATTTAAATTAATACCACTTATA  350

seq1  TTTTCACTTTTTGAAAATCATGCCCTTCTCCAGCAATATACTTTCATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTTTTTGAAAATCATGCCCTTCTCCAGCAATATACTTTCATTTT  400

seq1  ACTACTCTCTATTTGTCACTATTTAGTTGATTCCAAGAACTGCTGGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTCTCTATTTGTCACTATTTAGTTGATTCCAAGAACTGCTGGTATA  450

seq1  TAGATATAATGCATTAGAAAAATAAATGTTTCCAGATAACTATTACTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATAATGCATTAGAAAAATAAATGTTTCCAGATAACTATTACTTTA  500

seq1  ACTATATTTCAAAATTATTTTTTTAACTTTTTCTCATATTAGGTAGTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATTTCAAAATTATTTTTTTAACTTTTTCTCATATTAGGTAGTTAA  550

seq1  TTCTTTTTTAAAAATGTTTTATTAGGTATTTTCCTCATTTACATTTCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTAAAAATGTTTTATTAGGTATTTTCCTCATTTACATTTCGAA  600

seq1  TGCTATCCCAAAAGTTCCCCATACCCTCCCCCTGACTCCCATACCCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCCCAAAAGTTCCCCATACCCTCCCCCTGACTCCCATACCCCCTA  650

seq1  CTCCCACCTCCCGGCCCTGGCGTTCCCCTGCACTGAGGCAGATAAAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACCTCCCGGCCCTGGCGTTCCCCTGCACTGAGGCAGATAAAGTTT  700

seq1  GCACGACCAATGGGCCTCTCTTTCCATTGATGGCCAGCTAGGAAATTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGACCAATGGGCCTCTCTTTCCATTGATGGCCAGCTAGGAAATTCTG  750

seq1  ATACATATGCAGCTAGAGACACGAGTTCCAGGGGGTACTGGTCAGTCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATGCAGCTAGAGACACGAGTTCCAGGGGGTACTGGTCAGTCCAT  800

seq1  ACTGTTGTTCCACCTATAGGGTTGCAGATCCCCCTAGCTCCTTGGATAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTTCCACCTATAGGGTTGCAGATCCCCCTAGCTCCTTGGATAAT  850

seq1  TTCTCCAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAACAGCTGGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGCTCCTCCACTGGGGGCCCTGTGATCCATCCAACAGCTGGCTG  900

seq1  TGAGCATCCACCTCTGTGTCTGCCAGGCCCTGGTATAGTCTCACAAGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCATCCACCTCTGTGTCTGCCAGGCCCTGGTATAGTCTCACAAGAGA  950

seq1  CAACTATATCAGGGTACTTTCAGCAAAATCTTGCTAGTGTATGCAATGGT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAACTATATCA-GGTACTTTCAGCAAAATCTTGCTAGTGTATGCAATGGT  999

seq1  GGCACTGCTTGGAGGCTGATTATGGGAT-GGATCCCCGGATATGGCAGTG  1049
      |||||||||| || |||||||||||||| |||||||||||||||||||||
seq2  GGCACTGCTT-GAAGCTGATTATGGGATGGGATCCCCGGATATGGCAGTG  1048

seq1  TC  1051
      ||
seq2  TC  1050