BAC Information

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BAC

Clone NameB6Ng01-259L06
Chromosome12 (Build37)
Map Location 21,929,605 - 21,930,762
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668698, LOC546752, EG629257, Ddef2, Itgb1bp1, Cpsf3, Iah1, Adam17, Ywhaq, LOC100043407, LOC100042796, 6030426L16Rik, LOC434693
Downstream geneEG668645, EG668646, LOC100043416, LOC668650, EG668496, LOC668653, EG432637, LOC668656, EG629133, EG668660, EG668662, LOC668664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259L06.bB6Ng01-259L06.g
ACCGA064817GA064818
length1,140416
definitionB6Ng01-259L06.b B6Ng01-259L06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagactcagaccaaaaatccaagatctggactagaaaagccatgc
acttccctaccagatatgtgctcattaatgtgggaatatgcacattagta
caggtgcccgtggaggccagaagagggcacccgatcccccagagctggag
ttaccagtgattgtgagcctctcaacatgggaggaactgaactagggtct
gctcaaagaacagtaagaactctcatgcatggagccaccccaccagtccc
catatgtatttcttattagatattttcattatttacatttcaaatacccc
ctttcctgtttcccctttgaaaatcacctatcacttgcctcccttcctat
gccccccaacccacacactcccgcttcctggcccaggcattcccctatac
tagagcatagcaccatcacaggaccaagggcctctcctcccattgatgac
tgactaggccatcctctgctacatatgcagctggagccatgggattcttt
ttggttggtggtttagtctcagggagctctggggatactggttggttcat
attgtttctcctattgggcttcaaacccctttagctccttgggtctcata
tgtatttttaactgactttattttagggcagttttagattcatagagaca
ttgagagagaggcacaaagacattccctggtcccatctggtcaacaccct
ccaccagaatgtagcatggacaatcattgtcttcactcagtctacagcct
acacagcattcatgctttgagctgcatgttctgggttcacagatccatct
cctctacaatgtatacagcccagcttcactgacctcggataccccatgct
ccaccttgtccattctcaaagtgtctcaagcccccagattcaataggtcc
cgcgagttctgatttgacactcatggggtcaaagtgcaggcagatggtaa
aacctgtggaaggtcatcagacacacaacctggtggttgcagcagaaatc
acaggcaagtaggtatacaaacatgtcagcactgattcctcatcctgctt
ctcacaacctagcacacatgctcaggggctcactgaaggagaagagactc
tgggaactgcttgtcactctgctagtgacacccacaatgc
cgcggaattctctctctctcctcggtggtaaacagggtttgtaggagctg
ttggcaatcatcccaggtgggctggtgcgagtacatcagggattctatca
accctgtaagccctgtaggattttctgagaaagaaggatggttaactttc
caattataaaggtcagaagacgaaaacggccaatattgtagaagctgtag
gtcattctggctggtggggggtgctcccacagctctaagtggaagcgcca
cggtagaatcgctggcccctctgggagcactccccgccggcttctcgttc
ctgctgaggggcctccctccccactccccggaaccaaaggtggcggtgca
ggagctgagggttgggcggaggcgctggggaggggtacaggttggagggc
tgggggataaggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_21929605_21930762
seq2: B6Ng01-259L06.b_46_1185

seq1  GAATTCAGACGCAGACCAAAAATCCAAGATCTGGACTAGAAAAGCCATGC  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTCAGACCAAAAATCCAAGATCTGGACTAGAAAAGCCATGC  50

seq1  ACTTCCCTACCAGATATGTGCTCATTAATGTGGGAATATGCATGTTAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||  ||||| 
seq2  ACTTCCCTACCAGATATGTGCTCATTAATGTGGGAATATGCACATTAGTA  100

seq1  CAGGTGCCCGTGGAGGCCAGAAGAGGGCACCCGATCCCCCAGAGCTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGCCCGTGGAGGCCAGAAGAGGGCACCCGATCCCCCAGAGCTGGAG  150

seq1  TTACCAGTGATTGTGAGCCTCTCAACATGGGAGGAAATGAACTAGGGTCT  200
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTACCAGTGATTGTGAGCCTCTCAACATGGGAGGAACTGAACTAGGGTCT  200

seq1  GCTCAAAGAACAGTAAGAACTCTTAAGCAGGGAGCCACCCCACCAGTCCC  250
      ||||||||||||||||||||||| | ||| ||||||||||||||||||||
seq2  GCTCAAAGAACAGTAAGAACTCTCATGCATGGAGCCACCCCACCAGTCCC  250

seq1  CATATGTATTTCTTATTAGATATTTTCATTATTTACATTTCAAATACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTATTTCTTATTAGATATTTTCATTATTTACATTTCAAATACCCC  300

seq1  CTTTCCTGTTTCCCCTTTGAAAATCACCTATCACTTGCCTCCCTTCCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGTTTCCCCTTTGAAAATCACCTATCACTTGCCTCCCTTCCTAT  350

seq1  GCTCCCCAACCCACACACTCCAGCTTCCTGGCCCAGGTATTCCCCTATAC  400
      || |||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  GCCCCCCAACCCACACACTCCCGCTTCCTGGCCCAGGCATTCCCCTATAC  400

seq1  TAGGGCATAGCACCATCACAGGACCAAGGGCCTCTCCTCCCATTGATGAC  450
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCATAGCACCATCACAGGACCAAGGGCCTCTCCTCCCATTGATGAC  450

seq1  TGACTAGGCCATCCGCTGCTACATATGCAGCTGGAGCCATGGTTTTCATT  500
      |||||||||||||| |||||||||||||||||||||||||||  ||| ||
seq2  TGACTAGGCCATCCTCTGCTACATATGCAGCTGGAGCCATGGGATTCTTT  500

seq1  TTTGTTGGTGGTTTAGTCCGAGGGAGCTCTGGGGGTACTGGTTGGTTCAT  550
      || |||||||||||||||  |||||||||||||| |||||||||||||||
seq2  TTGGTTGGTGGTTTAGTCTCAGGGAGCTCTGGGGATACTGGTTGGTTCAT  550

seq1  GTTGTTTCTCCTATGAGACTGCAAACTGCTTCAGCTCCTTGGGTCTCATA  600
       |||||||||||||  | || |||||  ||| ||||||||||||||||||
seq2  ATTGTTTCTCCTATTGGGCTTCAAACCCCTTTAGCTCCTTGGGTCTCATA  600

seq1  TGTATTTTTAACTGACTTTATTTTAGGGCAGTTTTAGATTCATAGAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTAACTGACTTTATTTTAGGGCAGTTTTAGATTCATAGAGACA  650

seq1  TTGAGAGAGAGGCAC--AGACATTCCCTGGGCCCATCTGGTCAACACCCT  698
      |||||||||||||||  ||||||||||||| |||||||||||||||||||
seq2  TTGAGAGAGAGGCACAAAGACATTCCCTGGTCCCATCTGGTCAACACCCT  700

seq1  CCACCAGAATGTAGCATGGACAATCATTGTCTTCACTCAGTCTACAGCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGAATGTAGCATGGACAATCATTGTCTTCACTCAGTCTACAGCCT  750

seq1  ACACAGCATTCATGCTTTGAGCTGCATGTTCTGGGTTCACAGATCCATCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCATTCATGCTTTGAGCTGCATGTTCTGGGTTCACAGATCCATCT  800

seq1  CCTCTACAATGTATACAGCCCAGCTTCACTGACCTCGGATACCCCATGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACAATGTATACAGCCCAGCTTCACTGACCTCGGATACCCCATGCT  850

seq1  CCACCTTGTCCATTCTCAAAGTGCTTCAAAGCCCCTAGATTCAATAGGTC  898
      |||||||||||||||||||||||  || ||||||| ||||||||||||||
seq2  CCACCTTGTCCATTCTCAAAGTGTCTC-AAGCCCCCAGATTCAATAGGTC  899

seq1  CCGCGAGTTCTGATTTGACACTCATGGGGTCAAAGTGCAGGCAGATGGTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCGAGTTCTGATTTGACACTCATGGGGTCAAAGTGCAGGCAGATGGTA  949

seq1  AAACCTGTGGAAGGTCATCAGACACACAACCTGGTGGTTGCAGCAGAAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGTGGAAGGTCATCAGACACACAACCTGGTGGTTGCAGCAGAAAT  999

seq1  CACCAGGCAAGTAGGTATACAAACAATGTCAGCAACTGATTTCCTCATCC  1048
      || ||||||||||||||||||||| |||||||| ||||| ||||||||||
seq2  CA-CAGGCAAGTAGGTATACAAAC-ATGTCAGC-ACTGA-TTCCTCATCC  1045

seq1  TGCCTTCCCCACAACCTTAGCCAACAACCATGCTCCAAGGGGCTCACTGA  1098
      |||  | | ||||||| ||||  |||  |||||||  |||||||||||||
seq2  TGC--TTCTCACAACC-TAGC--ACA--CATGCTC--AGGGGCTCACTGA  1086

seq1  GGGAGAAGAGACTCTGGGACACGACATGTCACTCTTTGCTAAGTGGAATA  1148
       |||||||||||||||||| ||  | ||||||||  |||| ||||  | |
seq2  AGGAGAAGAGACTCTGGGA-ACTGCTTGTCACTC--TGCT-AGTG--ACA  1130

seq1  CCCACAATGC  1158
      ||||||||||
seq2  CCCACAATGC  1140