BAC Information

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BAC

Clone NameB6Ng01-262L02
Chromosome12 (Build37)
Map Location 32,253,280 - 32,253,889
singlet/doubletsinglet
Overlap geneLOC100043531
Upstream geneTmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4
Downstream geneBcap29, Dus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262L02.bB6Ng01-262L02.g
ACCGA067040GA067041
length760559
definitionB6Ng01-262L02.b B6Ng01-262L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctattaaagtagctgggtcaaattcactcaatctcacctag
gagccctagatgatgaataaggaaatctgtaaacacgagatggtagcttc
acataaaggtaagtaccaccaactgcccacagtcacagaggcaaggaaag
tacttacgccatttctaacttctacttgctccatgtactttctttttttt
aaagatttgtttgtttgtttgtttgtttattaattatatgtaagtacact
gtagctgtcttcagaggcaccagaagagggcatcagatctcattatgggt
ggttgtgagccaccatgtggttgctgggatttgaacttcggaccttcaga
agagcagtcgggtgctcttacccactgagccatctcaccagcccgctcca
tgtactttcagttctgcactgtggtaataaggagtcagtttgacatccct
acccacaatcagatgtgatgaacactttcagcaaataagcaggacacaaa
actaatgtacaaaactcggtagtttatctattaatcattaaagaacgtac
tgaggaaaaaaatcggagggaaaatgactttgcaataccattcaaatgaa
ccaataaaacaaaaactttaaacatagtaaacataataaacttaaccaag
gatgtgaaaaacctctataatgaaaacttgaaagcactttagaaaaaaac
tagagaagacactagaagatgggaaacttctgctattcatgggataggaa
aaaattaata
agtactgtcttatcacttcatctgagaactagtggtccctcacctacttc
atctttccattcacctttttaatataaaagttacagatacacagaaatat
ggtaacctgtatgtacagacagaaagaaacttcaactggattgagatgga
aaaaaaaaaaaaaaacaacaaaaccaaacagccaggaatgtgaacagaat
actaatgtttgtataaatagagggaatacatacttgtgtattatgtaaac
cagagctcaaaaaagatggcctattcagatggagttaagcaatgagttgc
ttacaaaagtgtaggcagggtcaagaaagatcaagacagagcaatggcag
tgtccagctgaagggagctgtgagtggctacctgtcaaagaagagaggtc
tgtggtgtcaatctgagaaggcaagaggagggagggagctgtcatcagga
cccaggtgttatcaaagaagtctgcccaacagaggcagaatcacagctat
taatagattctcattcagcagtgaaaggattccagggaccactaaaacac
ccttccccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_32253280_32253889
seq2: B6Ng01-262L02.g_67_631

seq1  GAATTCAGTACTGTCTTATCACTTCATCTGAGAACTAGTGGTCCCTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTGTCTTATCACTTCATCTGAGAACTAGTGGTCCCTCACC  50

seq1  TACTTCATCTTTCCATTCACCTTTTTAATATAAAAGTTACAGATACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATCTTTCCATTCACCTTTTTAATATAAAAGTTACAGATACACAG  100

seq1  AAATATGGTAACCTGTATGTACAGACAGAAAGAAACTTCAACTGGATTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGGTAACCTGTATGTACAGACAGAAAGAAACTTCAACTGGATTGA  150

seq1  GATGGAAAAAAAAAAAAAAAACAACAAAACCAAACAGCCAGGAATGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAAAAAAAAAAAAAAACAACAAAACCAAACAGCCAGGAATGTGAA  200

seq1  CAGAATACTAATGTTTGTATAAATAGAGGGAATACATACTTGTGTATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATACTAATGTTTGTATAAATAGAGGGAATACATACTTGTGTATTAT  250

seq1  GTAAACCAGAGCTCAAAAAAGATGGCCTATTCAGATGGAGTTAAGCAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCAGAGCTCAAAAAAGATGGCCTATTCAGATGGAGTTAAGCAATG  300

seq1  AGTTGCTTACAAAAGTGTAGGCAGGGTCAAGAAAGATCAAGACAGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTTACAAAAGTGTAGGCAGGGTCAAGAAAGATCAAGACAGAGCAA  350

seq1  TGGCAGTGTCCAGCTGAAGGGAGCTGTGAGTGGCTACCTGTCAGAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGGCAGTGTCCAGCTGAAGGGAGCTGTGAGTGGCTACCTGTCAAAGAAGA  400

seq1  GAGGTCTGTGGTGTCAATCTGAGAAGGCAAGAGGAGGGAGGGAGCTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTGTGGTGTCAATCTGAGAAGGCAAGAGGAGGGAGGGAGCTGTCA  450

seq1  TCAGGACCCAGGTGTTATCAAAGAAGTCTGCCCAACAGAGGCAGAATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACCCAGGTGTTATCAAAGAAGTCTGCCCAACAGAGGCAGAATCAC  500

seq1  AGCTATTAATAGATTCTCATTCAGCAGTG-AAGGATTCCAGGGACCACTA  549
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGCTATTAATAGATTCTCATTCAGCAGTGAAAGGATTCCAGGGACCACTA  550

seq1  AAACACCC-TCCCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCC  598
      |||||||| ||||||                                   
seq2  AAACACCCTTCCCCC-----------------------------------  565

seq1  CTCCCCTCCCCC  610
                  
seq2  ------------  565