BAC Information

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BAC

Clone NameB6Ng01-264N08
Chromosome12 (Build37)
Map Location 15,512,468 - 15,513,651
singlet/doubletsinglet
Overlap genenone
Upstream geneMap1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264N08.bB6Ng01-264N08.g
ACCGA068638GA068639
length1,1831,189
definitionB6Ng01-264N08.b B6Ng01-264N08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattggacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacctctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggttacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcgtgtagaagaatgcgaatcgatccatacttat
ctccttgtactaaaggtcaatctagtgatccaggaacttcacataaaacc
agagacactgaaacttatagaggagaaagtggggcaaggctgagatatgg
gcacagggaaaagtcctgaccgaacacatgcttgactgtagatcggaatg
atatgacctatgacctcaagtttctgcagcctg

gaattcatttccaagcagccacctgatggctcacaacagtctgtaactcc
agtcttcaagaatcagaaactttctgacctccaagagcattgaatgtaca
tggcacacatacatagatgtaggcaaaacacccatatatacacaaaagaa
aatgaaaaacaaaaagacatagaatgtgttgggaggtaccttggacagtt
ggaaggaagattgaaggggcaggtataatcataatacattgcatgcatgt
ataaaattctcaaagaaataataaaatacatttaaataaagagactagga
tccatcagagataacttggggaaaccagatgtaattaaggcttaacattt
tataatgtaaagttacagaaatttatggataacatagacttcatgtatat
cttggacatttaaagcctcttagacatcatgtctgatgtcctgaaataaa
atgtgatacagcatgcaaaatgcaaaccaccaagctaggagttggggcac
acaggttttagcacttttcttcagatttgtgtttttctaatgtatacaaa
agtaatgtgggaaagattattctaaagtccccaatagcactgagactcta
ttattatttcctttccctaatactgaacataatagatgtcataaaattta
atgacctccttaacacaagtggtaaattatattttacaataagaggctga
gttactattcagtaaatttgtaaagagagtcgtgcattgcaagtgctttt
ttttttttccccctcacattatcagagcttggggaatgaatttgaagcag
gaagaaattcaacttcatttgtagggggtttggcctcttctccctttgtt
cctcatccacagatatttatggacagtttccatgtgcttggcaccctcac
aggattggtgatggagtggctataagttacatggctacactgcctcttga
tgtttaagggcataaataaaataagtgattaagaaaacagctggagcatg
gaaagaatatatactcagtgaatactgacagacaggcatccagaaaaaca
cactcttctgtgtccctcaacttatttcatgaatattctaccttccagga
gtggtctatcatggtcctcaatgttcctttccatcacggaaagtctatac
ataggaataccgtatgccaatttgtttcctgggaaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15512468_15513651
seq2: B6Ng01-264N08.g_66_1254 (reverse)

seq1  CAGTT--CCAGGAAACAAAT--GCATACCGTATACCCTATGTATAGATGT  46
      |||||  |||||||||||||  |||||| ||||  ||||||||||||  |
seq2  CAGTTTCCCAGGAAACAAATTGGCATACGGTAT-TCCTATGTATAGACTT  49

seq1  TCCCGTTGATGAGAAGG-ACATTGA-GAACATGATAGAACCAACTCCTGG  94
      |||   |||||  |||| ||||||| || |||||||||  | ||||||||
seq2  TCC--GTGATGGAAAGGAACATTGAGGACCATGATAGA--CCACTCCTGG  95

seq1  GAAAGGTAAGATA-TCATGAAATAAGTTGAGGAACACAGAAGAGTGTG-T  142
        ||||||  ||| |||||||||||||||||| ||||||||||||||| |
seq2  --AAGGTAGAATATTCATGAAATAAGTTGAGGGACACAGAAGAGTGTGTT  143

seq1  TTTCTGGATGCCTGTCTGTCAGTATTTCACTGAGTATATA-TCTTTCCAT  191
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  TTTCTGGATGCCTGTCTGTCAGTA-TTCACTGAGTATATATTCTTTCCAT  192

seq1  GCTCCAGCTG-TTTCTTAATCCACTTATTT--ATTATGCCC-TAAACATC  237
      |||||||||| ||||||||| |||||||||   |||||||| ||||||||
seq2  GCTCCAGCTGTTTTCTTAAT-CACTTATTTTATTTATGCCCTTAAACATC  241

seq1  AAGAGGCAGTGTAGCCATGTAACTTATAGCCACTCCATCACCAATCCTGT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCAGTGTAGCCATGTAACTTATAGCCACTCCATCACCAATCCTGT  291

seq1  GA-GGTGCCAAGCACATGGAAACTGTCCATAAATATCTGTGGATGAGGAA  336
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGCCAAGCACATGGAAACTGTCCATAAATATCTGTGGATGAGGAA  341

seq1  CAAAGGGAGAAGAGGCCAAACCCCCTACAAATGAAGTTGAATTTCTTCCT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGAGAAGAGGCCAAACCCCCTACAAATGAAGTTGAATTTCTTCCT  391

seq1  GCTTCAAATTCATTCCCCAAGCTCTGATAATGTGAGGGGGAAAAAAAAAA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAATTCATTCCCCAAGCTCTGATAATGTGAGGGGGAAAAAAAAAA  441

seq1  AAGCACTTGCAATGCACGACTCTCTTTACAAATTTACTGAATAGTAACTC  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACTTGCAATGCACGACTCTCTTTACAAATTTACTGAATAGTAACTC  491

seq1  AGCCTCTTATTGTAAAATATAATTTACCACTTGTGTTAAGGAGGTCATTA  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTTATTGTAAAATATAATTTACCACTTGTGTTAAGGAGGTCATTA  541

seq1  AATTTTATGACATCTATTATGTTCAGTATTAGGGAAAGGAAATAATAATA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATGACATCTATTATGTTCAGTATTAGGGAAAGGAAATAATAATA  591

seq1  GAGTCTCAGTGCTATTGGGGACTTTAGAATAATCTTTCCCACATTACTTT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCAGTGCTATTGGGGACTTTAGAATAATCTTTCCCACATTACTTT  641

seq1  TGTATACATTAGAAAAACACAAATCTGAAGAAAAGTGCTAAAACCTGTGT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATTAGAAAAACACAAATCTGAAGAAAAGTGCTAAAACCTGTGT  691

seq1  GCCCCAACTCCTAGCTTGGTGGTTTGCATTTTGCATGCTGTATCACATTT  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAACTCCTAGCTTGGTGGTTTGCATTTTGCATGCTGTATCACATTT  741

seq1  TATTTCAGGACATCAGACATGATGTCTAAGAGGCTTTAAATGTCCAAGAT  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAGGACATCAGACATGATGTCTAAGAGGCTTTAAATGTCCAAGAT  791

seq1  ATACATGAAGTCTATGTTATCCATAAATTTCTGTAACTTTACATTATAAA  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGAAGTCTATGTTATCCATAAATTTCTGTAACTTTACATTATAAA  841

seq1  ATGTTAAGCCTTAATTACATCTGGTTTCCCCAAGTTATCTCTGATGGATC  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAAGCCTTAATTACATCTGGTTTCCCCAAGTTATCTCTGATGGATC  891

seq1  CTAGTCTCTTTATTTAAATGTATTTTATTATTTCTTTGAGAATTTTATAC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTCTTTATTTAAATGTATTTTATTATTTCTTTGAGAATTTTATAC  941

seq1  ATGCATGCAATGTATTATGATTATACCTGCCCCTTCAATCTTCCTTCCAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGCAATGTATTATGATTATACCTGCCCCTTCAATCTTCCTTCCAA  991

seq1  CTGTCCAAGGTACCTCCCAACACATTCTATGTCTTTTTGTTTTTCATTTT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAAGGTACCTCCCAACACATTCTATGTCTTTTTGTTTTTCATTTT  1041

seq1  CTTTTGTGTATATATGGGTGTTTTGCCTACATCTATGTATGTGTGCCATG  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTGTATATATGGGTGTTTTGCCTACATCTATGTATGTGTGCCATG  1091

seq1  TACATTCAATGCTCTTGGAGGTCAGAAAGTTTCTGATTCTTGAAGACTGG  1136
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCAATGCTCTTGGAGGTCAGAAAGTTTCTGATTCTTGAAGACTGG  1141

seq1  AGTTACAGACTGTTGTGAGCCATCAGGTGGCTGCTTGGAAATGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGACTGTTGTGAGCCATCAGGTGGCTGCTTGGAAATGAATTC  1189


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