BAC Information

Click to search

BAC

Clone NameB6Ng01-265P10
Chromosome12 (Build37)
Map Location 24,565,627 - 24,566,602
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042895, LOC100043435, EG628081, LOC100042903, LOC100043440, EG668518, LOC100043445, LOC668697, LOC100042923, LOC677338, EG668701, LOC668471
Downstream geneLOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265P10.bB6Ng01-265P10.g
ACCGA069477GA069478
length990976
definitionB6Ng01-265P10.b B6Ng01-265P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctctctccttggtggtgaacagggtttgtaggagctgttgg
caatcatcccaggtgggctggagtgagtacatcagagaatttatcaaccc
tttaagccctgtaggattttctgagaaaggggggtggtttactttccagt
tatagagatcagagaaagaaaagggccagtattgcagaagctgtagatcg
ttctgtctggcagggggagctccaacagccctaaggggaagtgccactgt
agaatcggctggcccctcgctgtgggctctctgccggcttcttgttcctg
ctgagggacctccctccccgatccctagaactgaaggtggagccatgaga
gctgagggttggggtacaggttggagaaccgggggataaggtggtggtag
agagtcagaccattcagggggccattcagggggcggagtagaatttttgc
tggcttctccaggtagtagttttgatttctccttctcagcattctctcgg
accatcaaaaccttggtacctggacataggggtggaagaaatggacgaac
ccatgcagggcggaaattgcgctaaatcttcccacactgtgatgtacggt
tgctggtctgggtgcgatcctggtccttcctgaaaaacaatagcctttac
ggccctaatggtagggagatcaaatgttcctttaggaggccaagccaccc
caaaagtgggccattccgaggtacagtaagtctgccaaggtttcttttta
actcttactgatagatttcgtcctctcgccctaacgttccgtccaatggt
tcctcagtcaaatataacagggttgagacagtctgtccccatgacaaaat
ccagaaacagagaccaaaatgaagaacagagacaagggacaccagaaacg
gtccaagctcactcatccctgccttggacctatacaaccagccaaacgct
acctctgattgggttggaattccttcatccatctcctgtt
gaattctttcaggaacattttagctgaggaatggaagagggagacttagg
attagccagtgctctgtttaaagtctggaaccctctggaaaatggacaat
gtccagactcttctctctctctccctgtctctctacctccctccctctct
ccctcctttcctcccttttgttttgtttattgaaacagggttcctctatg
taacagcctggctgttctagaactcactttttagaccaggtcagccttga
actcacagagtgcctcctgtctcctatgagccccgattaaagacatgtgc
caccatgcctgaccagagggtattttcttaactaatgattgatggagcag
agcccagcccagtgtaggtggtacaaccctgggctagtgatcctgagttc
tataagaaagcaggctgagcaagccatggggagcaagccaggaagtagca
accctttcatggtctctgtatcagctcctgccttcaggttgctgccctgt
ttgagtcctgccctcattgcttttgatgatgaactgttatgtggaaactg
tgagtgaataaacccttttctccccaagttgcttgtggccatggtgtgtc
atcagagcaatggaaaccctaactcagacaacagggatgaagcctacagc
tcagagggtctactgacaatgcccatggttatagagccctaggaagggtg
caggatgcaggctaggtgtactgaattctagtctccctccctcaatcaga
gctgaatcaattgggctggaaagggcaggcctgcatagggcagagggtat
atcccaaacacctctgtgccatcaacagtttcacaggctcatctactccc
ctctcccaaccccatcccatccccccctagtcccctcctccctccccacc
tgctcaatcctgccatgttttcctacaatctttgtttgggtccatctgtc
tagaagatctgtcacatacacacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_24565627_24566602
seq2: B6Ng01-265P10.g_68_1043

seq1  GAATTCTTTCAGGAACATTTTAGCTGAGGAATGGAAGAGGGAGACTTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGGAACATTTTAGCTGAGGAATGGAAGAGGGAGACTTAGG  50

seq1  ATTAGCCAGTGCTCTGTTTAAAGTCTGGAACCCTCTGGAAAATGGACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCAGTGCTCTGTTTAAAGTCTGGAACCCTCTGGAAAATGGACAAT  100

seq1  GTCCAGACTCTTCTCTCTCTCTCCCTGTCTCTCTACCTCCCTCCCTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGACTCTTCTCTCTCTCTCCCTGTCTCTCTACCTCCCTCCCTCTCT  150

seq1  CCCTCCTTTCCTCCCTTTTGTTTTGTTTATTGAAACAGGGTTCCTCTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTTTCCTCCCTTTTGTTTTGTTTATTGAAACAGGGTTCCTCTATG  200

seq1  TAACAGCCTGGCTGTTCTAGAACTCACTTTTTAGACCAGGTCAGCCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCCTGGCTGTTCTAGAACTCACTTTTTAGACCAGGTCAGCCTTGA  250

seq1  ACTCACAGAGTGCCTCCTGTCTCCTATGAGCCCCGATTAAAGACATGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACAGAGTGCCTCCTGTCTCCTATGAGCCCCGATTAAAGACATGTGC  300

seq1  CACCATGCCTGACCAGAGGGTATTTTCTTAACTAATGATTGATGGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGCCTGACCAGAGGGTATTTTCTTAACTAATGATTGATGGAGCAG  350

seq1  AGCCCAGCCCAGTGTAGGTGGTACAACCCTGGGCTAGTGATCCTGAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGCCCAGTGTAGGTGGTACAACCCTGGGCTAGTGATCCTGAGTTC  400

seq1  TATAAGAAAGCAGGCTGAGCAAGCCATGGGGAGCAAGCCAGGAAGTAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAAAGCAGGCTGAGCAAGCCATGGGGAGCAAGCCAGGAAGTAGCA  450

seq1  ACCCTTTCATGGTCTCTGTATCAGCTCCTGCCTTCAGGTTGCTGCCCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTCATGGTCTCTGTATCAGCTCCTGCCTTCAGGTTGCTGCCCTGT  500

seq1  TTGAGTCCTGCCCTCATTGCTTTTGATGATGAACTGTTATGTGGAAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCCTGCCCTCATTGCTTTTGATGATGAACTGTTATGTGGAAACTG  550

seq1  TGAGTGAATAAACCCTTTTCTCCCCAAGTTGCTTGTGGCCATGGTGTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAATAAACCCTTTTCTCCCCAAGTTGCTTGTGGCCATGGTGTGTC  600

seq1  ATCAGAGCAATGGAAACCCTAACTCAGACAACAGGGATGAAGCCTACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCAATGGAAACCCTAACTCAGACAACAGGGATGAAGCCTACAGC  650

seq1  TCAGAGGGTCTACTGACAATGCCCATGGTTATAGAGCCCTAGGAAGGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGTCTACTGACAATGCCCATGGTTATAGAGCCCTAGGAAGGGTG  700

seq1  CAGGATGCAGGCTAGGTGTACTGAATTCTAGTCTCCCTCCCTCAATCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGCAGGCTAGGTGTACTGAATTCTAGTCTCCCTCCCTCAATCAGA  750

seq1  GCTGAATCAATTGGGCTGGAAAGGGCAGGCCTGCATAGGGCAGAGGGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATCAATTGGGCTGGAAAGGGCAGGCCTGCATAGGGCAGAGGGTAT  800

seq1  ATCCCAAACACCTCTGTGCCATCAACAGTTTCACAGGCTCATCTACTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAAACACCTCTGTGCCATCAACAGTTTCACAGGCTCATCTACTCCC  850

seq1  CTCTCCCCACCCCCATCCCATCCCCCCCTAGTCCCCTCCTCCCTCCCCAC  900
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTCT-CCCAACCCCATCCCATCCCCCCCTAGTCCCCTCCTCCCTCCCCAC  899

seq1  CTGCTCAATCCTGCCATG-TTTCCTACCATCTTTGTTTGTGTCCATCTGT  949
      |||||||||||||||||| |||||||| ||||||||||| ||||||||||
seq2  CTGCTCAATCCTGCCATGTTTTCCTACAATCTTTGTTTGGGTCCATCTGT  949

seq1  CT-GAAGATCTTGTCACATACACACACA  976
      || ||||||| |||||||||||||||||
seq2  CTAGAAGATC-TGTCACATACACACACA  976