BAC Information

Click to search

BAC

Clone NameB6Ng01-266K15
Chromosome12 (Build37)
Map Location 64,854,315 - 64,992,947
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665741, EG382606
Downstream geneLOC435302, EG623046, LOC623123, LOC217645, LOC217647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266K15.bB6Ng01-266K15.g
ACCGA070005GA070006
length8921,150
definitionB6Ng01-266K15.b B6Ng01-266K15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,854,315 - 64,855,206)(64,991,785 - 64,992,947)
sequence
gaattcaggtatctgaagtgtttgtgtgaaaagtgtgtttatttacctgg
agtgtcttttcctgtctctatgcctactggtgatctctctgaatccaatt
ccctcaatgatacaattataactaaaattaattatatcattattaatgat
aagcaaatttattctaagaataagcaatgaaaaggaaaatagtataattg
caatatcatgtatcatattagacaatatattcttaaacttttctatttgc
atgtagacagactttattcttaatgtagagaaaataggaagaatattaca
taatcaatatcatatagaaaattaggaatcctagcctttcttatgtttta
ctagttgattggcataaaagataattcatcaggtagtttggagtaaccaa
attcattccgaatataaaagtaagaaaaactacatgttactctgaattac
aggttgtaaaacataacaaatttaattaaagtagatgaaatttggctttg
aatatttaaggaaaaatagtaagactagaataaaatcaattttatacaat
ccattgtgcaagagaaaaatactgctaggatatttacaagtctaaaactt
actatttaataatattgactaacctaataaaaaggaaaattgcaatactt
ttaaattgaataatgtctcttgaggtatatatgaccttgcagcccataac
atgcataaaatccaaaattgaatttttaatcttcctttcttgatccttac
gttattcttctgtttatgatgaaccagaacaggcattaaatcaattcaaa
gcttagtttctccagtgatgtgcttcttgtctctgaggttctgttttttt
tatattctctctctctctctctctctctctctctctctctct

gaattcttcagagaatgattacagttttatgttcatgattttaattatat
ttgtcataagatataagtattctccttctaaagattctaagttatggatt
tattttttctgagggtattttctcataaaacattgtaattgacatgctcc
ttcagttagtccttattttatatacagaaataggtatataatctctaatt
tattttaggccgtttaataaacacacaaaacacataaattcctataatga
attatagaaaaggaacattcatggtgtattttaatttattacattcagcc
ttaaaatttgagaaatggcaattccattacaattcaagtagtaaagagaa
aattagaaaagtatatatttaaggttagtgtcttcctaacttaaaaggtc
ataagaagttcaatactgaaaacaacttaaaaatgtctcatggatatttt
agcaatttttgtgtgataatacagaatttggtaaattttacagtctgtgc
tttcataagaagaggaaactttaacacggagagataacaatgaaatagga
gtgaacatggtagtaagaataatttagcaaaaagaatctgaagtgaatga
agcacacctgtgtgtgtgtgtgtataacctcaattatagatgcacagtaa
aggcttagagctttagacttgaatacattaaactctatgtactccaataa
cagaattacaatttgatgaactactgagaggtaacttctaagttgcagaa
aactctagctgtgaaagtgcatttacatgcccaaggccttggtcttctct
gcagcacccttagctcagagaactctgatagtgagaagcaagattagtca
catgtgatttgcccaaatgattgattccagaggaagacctgcttgggtgt
gcttgcctgggttgggctactcttcaacagggtgccataatggctgctgg
ggagatcacacacattgatcctgtctctacagattgctttgaatttctac
taaatttcactcacaaaacaattttatactcttaaatatgatttttcaga
tgataaattatatcatggtaaagcattttatgaatgctatggagctatag
caggtctacttgatagtatctatgtgacacattagctacatttttacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_64854315_64855206
seq2: B6Ng01-266K15.b_47_938

seq1  GAATTCAGGTATCTGAAGTGTTTGTGTGAAAAGTGTGTTTATTTACCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTATCTGAAGTGTTTGTGTGAAAAGTGTGTTTATTTACCTGG  50

seq1  AGTGTCTTTTCCTGTCTCTATGCCTACTGGTGATCTCTCTGAATCCAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTTTTCCTGTCTCTATGCCTACTGGTGATCTCTCTGAATCCAATT  100

seq1  CCCTCAATGATACAATTATAACTAAAATTAATTATATCATTATTAATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAATGATACAATTATAACTAAAATTAATTATATCATTATTAATGAT  150

seq1  AAGCAAATTTATTCTAAGAATAAGCAATGAAAAGGAAAATAGTATAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATTTATTCTAAGAATAAGCAATGAAAAGGAAAATAGTATAATTG  200

seq1  CAATATCATGTATCATATTAGACAATATATTCTTAAACTTTTCTATTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCATGTATCATATTAGACAATATATTCTTAAACTTTTCTATTTGC  250

seq1  ATGTAGACAGACTTTATTCTTAATGTAGAGAAAATAGGAAGAATATTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACAGACTTTATTCTTAATGTAGAGAAAATAGGAAGAATATTACA  300

seq1  TAATCAATATCATATAGAAAATTAGGAATCCTAGCCTTTCTTATGTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATATCATATAGAAAATTAGGAATCCTAGCCTTTCTTATGTTTTA  350

seq1  CTAGTTGATTGGCATAAAAGATAATTCATCAGGTAGTTTGGAGTAACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTGATTGGCATAAAAGATAATTCATCAGGTAGTTTGGAGTAACCAA  400

seq1  ATTCATTCCGAATATAAAAGTAAGAAAAACTACATGTTACTCTGAATTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCCGAATATAAAAGTAAGAAAAACTACATGTTACTCTGAATTAC  450

seq1  AGGTTGTAAAACATAACAAATTTAATTAAAGTAGATGAAATTTGGCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTAAAACATAACAAATTTAATTAAAGTAGATGAAATTTGGCTTTG  500

seq1  AATATTTAAGGAAAAATAGTAAGACTAGAATAAAATCAATTTTATACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAAGGAAAAATAGTAAGACTAGAATAAAATCAATTTTATACAAT  550

seq1  CCATTGTGCAAGAGAAAAATACTGCTAGGATATTTACAAGTCTAAAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTGCAAGAGAAAAATACTGCTAGGATATTTACAAGTCTAAAACTT  600

seq1  ACTATTTAATAATATTGACTAACCTAATAAAAAGGAAAATTGCAATACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTAATAATATTGACTAACCTAATAAAAAGGAAAATTGCAATACTT  650

seq1  TTAAATTGAATAATGTCTCTTGAGGTATATATGACCTTGCAGCCCATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGAATAATGTCTCTTGAGGTATATATGACCTTGCAGCCCATAAC  700

seq1  ATGCATAAAATCCAAAATTGAATTTTTAATCTTCCTTTCTTGATCCTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATAAAATCCAAAATTGAATTTTTAATCTTCCTTTCTTGATCCTTAC  750

seq1  GTTATTCTTCTGTTTATGATGAACCAGAACAGGCATTAAATCAATTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTCTTCTGTTTATGATGAACCAGAACAGGCATTAAATCAATTCAAA  800

seq1  GCTTAGTTTCTCCAGTGATGTGCTTCTTGTCTCTGAGGTTCTGTTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTTTCTCCAGTGATGTGCTTCTTGTCTCTGAGGTTCTGTTTTTTT  850

seq1  TATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  892
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  892


seq1: chr12_64991785_64992947
seq2: B6Ng01-266K15.g_64_1213 (reverse)

seq1  GAAGTAAAAATGTTAGCTACATGTTGTCACATAGATACTAATCCAAGTAG  50
      |||||||||||| |||||| ||| ||||||||||||||||   |||||||
seq2  GAAGTAAAAATG-TAGCTA-ATG-TGTCACATAGATACTA--TCAAGTAG  45

seq1  ACTTGCTATAGCT-CATAGCATTCATAAAATTGCTTTACCCATGATTATA  99
      || |||||||||| |||||||||||||||| ||||||| |||||| ||||
seq2  ACCTGCTATAGCTCCATAGCATTCATAAAA-TGCTTTA-CCATGA-TATA  92

seq1  ATTTATCCATTCTGAAAAATTCATATTTAAGAGTATTAAAAATTGTTTTG  149
      |||||||   ||||||||| ||||||||||||||||  ||||||||||||
seq2  ATTTATC--ATCTGAAAAA-TCATATTTAAGAGTAT--AAAATTGTTTTG  137

seq1  TGAGTGAAATTTAGTAGAAATTCAAAGCAATCTTGTAGAGACAGGATCAA  199
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAGTGAAATTTAGTAGAAATTCAAAGCAATC-TGTAGAGACAGGATCAA  186

seq1  TGTGTGTGATTCTCCCAGCAGCCATTATGGCACCCTGTTTGAAGAGTAGC  249
      ||||||||||   |||||||||||||||||||||||| ||||||||||||
seq2  TGTGTGTGATCTCCCCAGCAGCCATTATGGCACCCTG-TTGAAGAGTAGC  235

seq1  CCAA-CCAGGCAAGCACACCCAAGCAGGTCTTCCTCTGGAATCAATCATT  298
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCAGGCAAGCACACCCAAGCAGGTCTTCCTCTGGAATCAATCATT  285

seq1  TGGGCAAATCACATGTGACTAATCTTGCTTCTCACTATCAGAGTTCTCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAAATCACATGTGACTAATCTTGCTTCTCACTATCAGAGTTCTCTG  335

seq1  AGCTAAGGGTGCTGCAGAGAAGACCAAGGCCTTGGGCATGTAAATGCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGGGTGCTGCAGAGAAGACCAAGGCCTTGGGCATGTAAATGCACT  385

seq1  TTCACAGCTAGAGTTTTCTGCAACTTAGAAGTTACCTCTCAGTAGTTCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCTAGAGTTTTCTGCAACTTAGAAGTTACCTCTCAGTAGTTCAT  435

seq1  CAAATTGTAATTCTGTTATTGGAGTACATAGAGTTTAATGTATTCAAGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTAATTCTGTTATTGGAGTACATAGAGTTTAATGTATTCAAGTC  485

seq1  TAAAGCTCTAAGCCTTTACTGTGCATCTATAATTGAGGTTATACACACAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTCTAAGCCTTTACTGTGCATCTATAATTGAGGTTATACACACAC  535

seq1  ACACACAGGTGTGCTTCATTCACTTCAGATTCTTTTTGCTAAATTATTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGGTGTGCTTCATTCACTTCAGATTCTTTTTGCTAAATTATTCT  585

seq1  TACTACCATGTTCACTCCTATTTCATTGTTATCTCTCCGTGTTAAAGTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCATGTTCACTCCTATTTCATTGTTATCTCTCCGTGTTAAAGTTT  635

seq1  CCTCTTCTTATGAAAGCACAGACTGTAAAATTTACCAAATTCTGTATTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTATGAAAGCACAGACTGTAAAATTTACCAAATTCTGTATTAT  685

seq1  CACACAAAAATTGCTAAAATATCCATGAGACATTTTTAAGTTGTTTTCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAAAATTGCTAAAATATCCATGAGACATTTTTAAGTTGTTTTCAG  735

seq1  TATTGAACTTCTTATGACCTTTTAAGTTAGGAAGACACTAACCTTAAATA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAACTTCTTATGACCTTTTAAGTTAGGAAGACACTAACCTTAAATA  785

seq1  TATACTTTTCTAATTTTCTCTTTACTACTTGAATTGTAATGGAATTGCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTTTCTAATTTTCTCTTTACTACTTGAATTGTAATGGAATTGCCA  835

seq1  TTTCTCAAATTTTAAGGCTGAATGTAATAAATTAAAATACACCATGAATG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAATTTTAAGGCTGAATGTAATAAATTAAAATACACCATGAATG  885

seq1  TTCCTTTTCTATAATTCATTATAGGAATTTATGTGTTTTGTGTGTTTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCTATAATTCATTATAGGAATTTATGTGTTTTGTGTGTTTATT  935

seq1  AAACGGCCTAAAATAAATTAGAGATTATATACCTATTTCTGTATATAAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGCCTAAAATAAATTAGAGATTATATACCTATTTCTGTATATAAAA  985

seq1  TAAGGACTAACTGAAGGAGCATGTCAATTACAATGTTTTATGAGAAAATA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTAACTGAAGGAGCATGTCAATTACAATGTTTTATGAGAAAATA  1035

seq1  CCCTCAGAAAAAATAAATCCATAACTTAGAATCTTTAGAAGGAGAATACT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCAGAAAAAATAAATCCATAACTTAGAATCTTTAGAAGGAGAATACT  1085

seq1  TATATCTTATGACAAATATAATTAAAATCATGAACATAAAACTGTAATCA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTATGACAAATATAATTAAAATCATGAACATAAAACTGTAATCA  1135

seq1  TTCTCTGAAGAATTC  1163
      |||||||||||||||
seq2  TTCTCTGAAGAATTC  1150


| Home | SequenceCutter | Blast | Download |