BAC Information

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BAC

Clone NameB6Ng01-266O24
Chromosome12 (Build37)
Map Location 28,975,387 - 28,976,233
singlet/doubletsinglet
Overlap genenone
Upstream geneSox11, LOC100043009, LOC669327
Downstream gene1110015M06Rik, Allc, Colec11, Rps7, Rnaseh1, Adi1, Ttc15, Tssc1, 4833405L11Rik, LOC629608
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266O24.bB6Ng01-266O24.g
ACCGA070205GA070206
length936847
definitionB6Ng01-266O24.b B6Ng01-266O24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttgaatcttg
tcaaatgctttctccgcatctaatgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggatttctgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgagtatttttgc
atcgatattcataagggaaattggactgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctggtagaactctgcactaaacccatctg
gtcctgggctttttttttggctgggagactattagcgactgcttctattt
ctttaggggacatgggactatttagatcttttttttggggggggcagggt
ttctgattggcctagaagttgctacactgggctaggctggctggcccagg
gatccacctatttctgactctcaatgttgagataactaactagtgccact
acactttgcttttaaatgtgacttctgggcattgatctcaggtcctcagg
cttgttcagcaaacactttaccaactgagccactgcctcagcctttcttc
tgatatttaattggccagagtatctgacatgttataggtgacatctgacc
tgttataggtgatatctggatctgctagtattcactgaaactcaatggct
acactgatttttggttttcccactttccctggaaaacattcttatctagt
tgaatagagttctctcagtgtgaaagtctaagtctc
gaattcttttgaatttctccatcagtccagtgatattggacggggacagg
atgtacactaaaagcacgctctggagtctagctgtactcttgagagtctg
cttggctatttcatagtccctataagagatcacatcttgtaaatgactct
gaagtccacagagaccagaaccagtgtcaccttctttgtctgccaagcca
tcatcaagctgtgtcaggcttgttagagagtgaagcctgctgtactttta
acaagacatccactaagcctgaatgggggcagttgagacacatctgagac
atctgtcatttcctaatgcatcaaggaggaatcggtgacaagcttccagt
gacagtgagcaggggggaaaacatgtcaggctgttcacactgtccacaca
gtaattttccttggggacagttatgactttgtactgtcatttgcttcaga
gtgatgaggtattacaaagacagcttagatgtgtccttaaattgcttaaa
gttgagaaaaataagtgatagaccactgtcagaagcaataacatctggcg
atgtgtgtgacgaacctctgtgggtgagatgagattgggagatgaacata
tgatcttcaactttaattgcattaatgcatgagaatcaaaatcatcccta
gattggctttccaatggccatcgatttaaattcttaaacaaaaagttcat
agcccctttatcctgtaggaaagcaagctgttgagcttctttatatttat
tatctggtatattcccatttaaataatgttttattaattatttgagcaat
ctgttctcatcatattcctcccagatctcatctcctcctcctcctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_28975387_28976233
seq2: B6Ng01-266O24.g_67_913

seq1  GAATTCTTTTGAATTTCTCCATCAGTCCAGTGATATTGGACGGGGACAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGAATTTCTCCATCAGTCCAGTGATATTGGACGGGGACAGG  50

seq1  ATGTACACTAAAAGCACGCTCTGGAGTCTAGCTGTACTCTTGAGAGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACACTAAAAGCACGCTCTGGAGTCTAGCTGTACTCTTGAGAGTCTG  100

seq1  CTTGGCTATTTCATAGTCCCTATAAGAGATCACATCTTGTAAATGACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTATTTCATAGTCCCTATAAGAGATCACATCTTGTAAATGACTCT  150

seq1  GAAGTCCACAGAGACCAGAACCAGTGTCACCTTCTTTGTCTGCCAAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCACAGAGACCAGAACCAGTGTCACCTTCTTTGTCTGCCAAGCCA  200

seq1  TCATCAAGCTGTGTCAGGCTTGTTAGAGAGTGAAGCCTGCTGTACTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAAGCTGTGTCAGGCTTGTTAGAGAGTGAAGCCTGCTGTACTTTTA  250

seq1  ACAAGACATCCACTAAGCCTGAATGGGGGCAGTTGAGACACATCTGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACATCCACTAAGCCTGAATGGGGGCAGTTGAGACACATCTGAGAC  300

seq1  ATCTGTCATTTCCTAATGCATCAAGGAGGAATCGGTGACAAGCTTCCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCATTTCCTAATGCATCAAGGAGGAATCGGTGACAAGCTTCCAGT  350

seq1  GACAGTGAGCAGGGGGGAAAACATGTCAGGCTGTTCACACTGTCCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTGAGCAGGGGGGAAAACATGTCAGGCTGTTCACACTGTCCACACA  400

seq1  GTAATTTTCCTTGGGGACAGTTATGACTTTGTACTGTCATTTGCTTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTTCCTTGGGGACAGTTATGACTTTGTACTGTCATTTGCTTCAGA  450

seq1  GTGATGAGGTATTACAAAGACAGCTTAGATGTGTCCTTAAATTGCTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAGGTATTACAAAGACAGCTTAGATGTGTCCTTAAATTGCTTAAA  500

seq1  GTTGAGAAAAATAAGTGATAGACCACTGTCAGAAGCAATAACATCTGGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAAAAATAAGTGATAGACCACTGTCAGAAGCAATAACATCTGGCG  550

seq1  ATGTGTGTGACGAACCTCTGTGGGTGAGATGAGATTGGGAGATGAACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGACGAACCTCTGTGGGTGAGATGAGATTGGGAGATGAACATA  600

seq1  TGATCTTCAACTTTAATTGCATTAATGCATGAGAATCAAAATCATCCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTCAACTTTAATTGCATTAATGCATGAGAATCAAAATCATCCCTA  650

seq1  GATTGGCTTTCCAATGGCCATCGATTTAAATTCTTAAACAAAAAGTTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGCTTTCCAATGGCCATCGATTTAAATTCTTAAACAAAAAGTTCAT  700

seq1  AGCCCCTTTATCCTGTAGGAAAGCAAGCTGTTGAGCTTCTTTATATTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTTTATCCTGTAGGAAAGCAAGCTGTTGAGCTTCTTTATATTTAT  750

seq1  TATCTGGTATATTCCCATTTAAATAATGTTTTATTAATTATTTGAGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGTATATTCCCATTTAAATAATGTTTTATTAATTATTTGAGCAAT  800

seq1  CTGTTCTCATCATATTCCTCCCAGATCTCATCTCCTCCTCCTCCTCC  847
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTCATCATATTCCTCCCAGATCTCATCTCCTCCTCCTCCTCC  847