BAC Information

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BAC

Clone NameB6Ng01-266P23
Chromosome12 (Build37)
Map Location 13,022,164 - 13,111,935
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043209, D12Ertd553e, LOC100043215, Mycn, EG668473
Downstream geneLOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266P23.bB6Ng01-266P23.g
ACCGA070246GA070247
length1,1111,091
definitionB6Ng01-266P23.b B6Ng01-266P23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,110,813 - 13,111,935)(13,022,164 - 13,023,237)
sequence
gaattctctttgttactccttggaggtttatcatatgtgtggccatccca
agagctaaagatgagcccaagggcgaacacacaggtcatgagaaaagatg
attttggatttgtgacatgattggtcagatggtacccttagtaagcagag
ttttactgccagtaactgagttgatactggtccataagggaggaaaggag
gccaagtagatagcctagtggctaaagtatttgccttgcaaatgagagag
cctgagttttaagctccagaacccatgtttctttgctttttttgttttgt
ttttgtttttgttttgttttgttaaagctgatcactgtgccatgttgccc
agatctggagagggagagataaaaggattcctgggacaagttagcaagct
ccagtctaatgagaaactttgtctcaaacaaacacggtggacagctccta
gggaaggacacatacactacatacaccacacacacacacacacacacaca
cacacacacacacacacactacatacacccccacaccactttgctttcca
gatctcagttgcccttctgggcaacataaaggtgatactgaaaatcactg
tgaagattaaatatctaccccctgcagatcccgggagaacaaaagcccca
gatggggctgaatagaaggaaccaaaactttttcttctgctgccgggact
gtcctacttgtttgccagacagtcactggatggggtggaagagtggccag
gaaatccaaatggagacagcacggagagaggagataaaagtcatgccagg
ctggggttcaccctttttctttcttgcgttgtgaaccccatgttatgaag
caactgccctcctctggcctcggtgccccctggatacaatgagggtgttt
gcttaggcaattttaaaagctcttgcatctctgatgttaacattctttaa
tgtattcgtttcaaaacccttgtgagtcttccagggctaagtctcctacc
tgtcagtttgaaatacgaccgggggacccattagtgtgggccagcccctg
ggggcgtgtgtttctgtacctgatgcatgcattttccacacttcatgttt
ccaataataac

gaattcattagaacacacgcacgcgagcgcacacacacacacatatccac
gcacatgcatacacacacacacacacacacacacacacacacacacacac
accataaaagtagaaccaaatcattggaatggagaaggaggctaacagga
gtaggaagaggacaagaggtcacaatgtgggggacaaatatgatagaaat
ccattacattacgtacctttatataaaaaggacatgagtgaaacccatta
ttatgtataattatatatgttaagaaaatgttaaaaataagtcagcatta
tacaggacatctctggctagtgtgattcatgttgtgtaatttgagatttc
acatttgtctgttcttttattttggaaagtatctactaaaaacacaggct
aactttataactcgtaaaagtttcattagaagcttaaaaaactctatttt
tttggccaagtcatttaacatcacaagatctatttgaagaaaatagccca
aaattgtaaaaatgatgaaatataatgaatgctatttgtcattgctaaat
gatatcccagatagggcaactgactccatgtccacccagtgaagaattta
taataacataggcatgtgcttccatttctatttgctgctcattcacaaac
agctttacaaaactgaaacgattgaaagccactgttcctagtttgaagtt
ctggaggtagggagtctcatatcagggtgtcatcagaactggagtctttt
ggggggcgggggagggggctgtggaggagaatctctaaataagttcctag
ttgcagacagcccatttggcaattcctggtgtagcttggcaaatattatt
tccagtctccacatggcattctgttctacctttttataagggacatcagt
tataggacacgtcaggacctcatggagatgaatcaattccatagcttcct
catcttcaggtacttccatttacgaatgaggtccctctcatatttaccta
gggatttttagaaatctcatggccattgatgaaacacacccattactatt
acgagaattgcatagatctgccaaacatacatgcacagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13110813_13111935
seq2: B6Ng01-266P23.b_46_1156 (reverse)

seq1  GTTATTATTTGAAAACATGAGATGTTGGAAAATGGCATGCATCCAAGTAC  50
      ||||||| ||| ||||||||  || |||||||| |||||||| || ||||
seq2  GTTATTA-TTGGAAACATGAAGTG-TGGAAAAT-GCATGCAT-CAGGTAC  46

seq1  AGAAAACACACGCCCCCAGGGGCT-GCCCACACTAATGGGTTCCCCGGTC  99
      || ||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  AG-AAACACACGCCCCCAGGGGCTGGCCCACACTAATGGGTCCCCCGGTC  95

seq1  GTTATTTCAAAACTGACCAGGTAGGAGACTTAGCCCCTGGAAGGACTCAC  149
      | |||||| ||||||| |||||||||||||||| |||||||| |||||||
seq2  G-TATTTC-AAACTGA-CAGGTAGGAGACTTAG-CCCTGGAA-GACTCAC  140

seq1  AAGGGTTTTGAAACGAATACATTTAAAGAATGTTTAAACATCAGAGATGC  199
      ||||||||||||||||||||| ||||||||||||  ||||||||||||||
seq2  AAGGGTTTTGAAACGAATACA-TTAAAGAATGTT--AACATCAGAGATGC  187

seq1  AAGAGCTTTTAAAATTGCCTAAGCAAACACCCTCATTGTATCCAGGGGGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTTTTAAAATTGCCTAAGCAAACACCCTCATTGTATCCAGGGGGC  237

seq1  ACCGAGGCCAGAGGAGGGCAGTTGCTTCATAACATGGGGTTCACAACGCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGGCCAGAGGAGGGCAGTTGCTTCATAACATGGGGTTCACAACGCA  287

seq1  AGAAAGAAAAAGGGTGAACCCCAGCCTGGCATGACTTTTATCTCCTCTCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAAAGGGTGAACCCCAGCCTGGCATGACTTTTATCTCCTCTCT  337

seq1  CCGTGCTGTCTCCATTTGGATTTCCTGGCCACTCTTCCACCCCATCCAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCTGTCTCCATTTGGATTTCCTGGCCACTCTTCCACCCCATCCAGT  387

seq1  GACTGTCTGGCAAACAAGTAGGACAGTCCCGGCAGCAGAAGAAAAAGTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTGGCAAACAAGTAGGACAGTCCCGGCAGCAGAAGAAAAAGTTT  437

seq1  TGGTTCCTTCTATTCAGCCCCATCTGGGGCTTTTGTTCTCCCGGGATCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCTTCTATTCAGCCCCATCTGGGGCTTTTGTTCTCCCGGGATCTG  487

seq1  CAGGGGGTAGATATTTAATCTTCACAGTGATTTTCAGTATCACCTTTATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGGTAGATATTTAATCTTCACAGTGATTTTCAGTATCACCTTTATG  537

seq1  TTGCCCAGAAGGGCAACTGAGATCTGGAAAGCAAAGTGGTGTGGGGGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCAGAAGGGCAACTGAGATCTGGAAAGCAAAGTGGTGTGGGGGTGT  587

seq1  ATGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGT  637

seq1  GTATGTAGTGTATGTGTCCTTCCCTAGGAGCTGTCCACCGTGTTTGTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTAGTGTATGTGTCCTTCCCTAGGAGCTGTCCACCGTGTTTGTTTG  687

seq1  AGACAAAGTTTCTCATTAGACTGGAGCTTGCTAACTTGTCCCAGGAATCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAAGTTTCTCATTAGACTGGAGCTTGCTAACTTGTCCCAGGAATCC  737

seq1  TTTTATCTCTCCCTCTCCAGATCTGGGCAACATGGCACAGTGATCAGCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTCTCCCTCTCCAGATCTGGGCAACATGGCACAGTGATCAGCTT  787

seq1  TAACAAAACAAAACAAAAACAAAAACAAAACAAAAAAAGCAAAGAAACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAACAAAACAAAAACAAAAACAAAACAAAAAAAGCAAAGAAACAT  837

seq1  GGGTTCTGGAGCTTAAAACTCAGGCTCTCTCATTTGCAAGGCAAATACTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCTGGAGCTTAAAACTCAGGCTCTCTCATTTGCAAGGCAAATACTT  887

seq1  TAGCCACTAGGCTATCTACTTGGCCTCCTTTCCTCCCTTATGGACCAGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTAGGCTATCTACTTGGCCTCCTTTCCTCCCTTATGGACCAGTA  937

seq1  TCAACTCAGTTACTGGCAGTAAAACTCTGCTTACTAAGGGTACCATCTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCAGTTACTGGCAGTAAAACTCTGCTTACTAAGGGTACCATCTGA  987

seq1  CCAATCATGTCACAAATCCAAAATCATCTTTTCTCATGACCTGTGTGTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCATGTCACAAATCCAAAATCATCTTTTCTCATGACCTGTGTGTTC  1037

seq1  GCCCTTGGGCTCATCTTTAGCTCTTGGGATGGCCACACATATGATAAACC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTGGGCTCATCTTTAGCTCTTGGGATGGCCACACATATGATAAACC  1087

seq1  TCCAAGGAGTAACAAAGAGAATTC  1123
      ||||||||||||||||||||||||
seq2  TCCAAGGAGTAACAAAGAGAATTC  1111


seq1: chr12_13022164_13023237
seq2: B6Ng01-266P23.g_68_1158

seq1  GAATTCATTAGAACACACGCACGCGAGCGCACACACACACACATATCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGAACACACGCACGCGAGCGCACACACACACACATATCCAC  50

seq1  GCACATGCATACACACACACACACACACACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCATACACACACACACACACACACACACACACACACACACACAC  100

seq1  ACCATAAAAGTAGAACCAAATCATTGGAATGGAGAAGGAGGCTAACAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAAAAGTAGAACCAAATCATTGGAATGGAGAAGGAGGCTAACAGGA  150

seq1  GTAGGAAGAGGACAAGAGGTCACAATGTGGGGGACAAATATGATAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAAGAGGACAAGAGGTCACAATGTGGGGGACAAATATGATAGAAAT  200

seq1  CCATTACATTACGTACCTTTATATAAAAAGGACATGAGTGAAACCCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTACATTACGTACCTTTATATAAAAAGGACATGAGTGAAACCCATTA  250

seq1  TTATGTATAATTATATATGTTAAGAAAATGTTAAAAATAAGTCAGCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTATAATTATATATGTTAAGAAAATGTTAAAAATAAGTCAGCATTA  300

seq1  TACAGGACATCTCTGGCTAGTGTGATTCATGTTGTGTAATTTGAGATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGACATCTCTGGCTAGTGTGATTCATGTTGTGTAATTTGAGATTTC  350

seq1  ACATTTGTCTGTTCTTTTATTTTGGAAAGTATCTACTAAAAACACAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTCTGTTCTTTTATTTTGGAAAGTATCTACTAAAAACACAGGCT  400

seq1  AACTTTATAACTCGTAAAAGTTTCATTAGAAGCTTAAAAAACTCTATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTATAACTCGTAAAAGTTTCATTAGAAGCTTAAAAAACTCTATTTT  450

seq1  TTTGGCCAAGTCATTTAACATCACAAGATCTATTTGAAGAAAATAGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCAAGTCATTTAACATCACAAGATCTATTTGAAGAAAATAGCCCA  500

seq1  AAATTGTAAAAATGATGAAATATAATGAATGCTATTTGTCATTGCTAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTAAAAATGATGAAATATAATGAATGCTATTTGTCATTGCTAAAT  550

seq1  GATATCCCAGATAGGGCAACTGACTCCATGTCCACCCAGTGAAGAATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCCAGATAGGGCAACTGACTCCATGTCCACCCAGTGAAGAATTTA  600

seq1  TAATAACATAGGCATGTGCTTCCATTTCTATTTGCTGCTCATTCACAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACATAGGCATGTGCTTCCATTTCTATTTGCTGCTCATTCACAAAC  650

seq1  AGCTTTACAAAACTGAAACGATTGAAAGCCACTGTTCCTAGTTTGAAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTACAAAACTGAAACGATTGAAAGCCACTGTTCCTAGTTTGAAGTT  700

seq1  CTGGAGGTAGGGAGTCTCATATCAGGGTGTCATCAGAACTGGAGTCTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGTAGGGAGTCTCATATCAGGGTGTCATCAGAACTGGAGTCTTTT  750

seq1  GGGGGGCGGGGGAGGGGGCTGTGGAGGAGAATCTCT-AATTAGTTCCTAG  799
      |||||||||||||||||||||||||||||||||||| ||| |||||||||
seq2  GGGGGGCGGGGGAGGGGGCTGTGGAGGAGAATCTCTAAATAAGTTCCTAG  800

seq1  TTGCAGACAGCC--ATTGGCAATTCCTGGTGTTGCTTGGC-AATATAATT  846
      ||||||||||||   ||||||||||||||||| ||||||| ||||| |||
seq2  TTGCAGACAGCCCATTTGGCAATTCCTGGTGTAGCTTGGCAAATATTATT  850

seq1  --CAATCTCCACATGGCATTCTG-TCTACCTTTTTATAA-GGACATCAGT  892
        || |||||||||||||||||| ||||||||||||||| ||||||||||
seq2  TCCAGTCTCCACATGGCATTCTGTTCTACCTTTTTATAAGGGACATCAGT  900

seq1  TAT--GACACGTCAGGACTTCATTGTGATG-ATCGATTCCTTAGCTTCCT  939
      |||  ||||||||||||| |||| | |||| ||| ||||| |||||||||
seq2  TATAGGACACGTCAGGACCTCATGGAGATGAATCAATTCCATAGCTTCCT  950

seq1  CATCTTCAAGTAC-TCCATTTACAAATGAGGTCCCTCTCATATTTA-CTA  987
      |||||||| |||| ||||||||| |||||||||||||||||||||| |||
seq2  CATCTTCAGGTACTTCCATTTACGAATGAGGTCCCTCTCATATTTACCTA  1000

seq1  GGGA-TTTTAGAAA-CTCAATGTCATTGATGAACACA-ACTCATTA-TAT  1033
      |||| ||||||||| ||||  | |||||||||| ||| || ||||| |||
seq2  GGGATTTTTAGAAATCTCATGGCCATTGATGAA-ACACACCCATTACTAT  1049

seq1  ATTGAGATATGCATAGATTTG-CAAATATACATGCACAGTCA  1074
         ||||  ||||||||| || |||| |||||||||||||||
seq2  TACGAGAATTGCATAGATCTGCCAAACATACATGCACAGTCA  1091


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