BAC Information

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BAC

Clone NameB6Ng01-267C20
Chromosome12 (Build37)
Map Location 89,385,706 - 89,386,137
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem63c, Ngb, Pomt2, Gstz1, EG625237, Tmed8, Gm263, 4933437F05Rik, AI413782, Ahsa1, Thsd3, Sptlc2, LOC667287, Nrp, 1810035L17Rik, Snw1, LOC100042747, EG544883, EG666806, EG633031, Oog1, LOC100042776, LOC100042778, LOC100042239, LOC100042786, BB287469, LOC100038964, LOC673658, LOC100038992, LOC100038982, LOC674027, LOC100039042, LOC100039052, LOC100039076, LOC100039087, LOC100039100, LOC100039191, LOC100039203, LOC627873, LOC100039162, LOC627881, LOC100039129, LOC636517, LOC544884, LOC100039226, LOC432715, EG667350, LOC546543, EG667388, LOC627971, LOC667395
Downstream geneLOC100039315, EG638008, EG666862, EG435337, LOC100039154, LOC633093, LOC667440, LOC100039383, EG266459, LOC667475, LOC620915, LOC435314, Adck1, LOC100039261, EG666915, Nrxn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267C20.bB6Ng01-267C20.g
ACCGA070379GA070380
length4261,173
definitionB6Ng01-267C20.b B6Ng01-267C20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgaaggtttggtttgttctttgtatgttttgtaagttgctggggaggagg
ggctgaaactcaggtgacatgctaagttctagaggcagatgaactagggc
actcatgaaaatctagcacaagggtatcaaacccacataccacataatta
aaggaaagcattgcttgcaataagtcatttaaaaataatatatttttggg
tttaagagacaagttaagagcaataattcccaccacccacatggtggcag
acaatcatgtgctactccagtacccagagggtccaatgccctcttttagc
ctccatggtcaccaagcatgcatgtggttacagatggacatatacacaaa
acacctttatatatataataaatgtatgaaataagatttgttgcatgtag
tgtatgagtgtgtgggtgtttgtttt
gaattcctaagcctgataaacagcttcagtgaaatagctggatataaaat
taactcaaacaagtcaatggcctttctctacacaaaggacaaacaggctg
agaaagaaattagggaaacaacacccttctcaatagccacaaataatata
aaatacctaggcgtgactctaactaaggaagtgaaagatctgtatgacaa
gaacttcatgtctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccatgctcatggattggcaggatcaatatagtaaaactggct
atcttgccaaaagcaatctagattcaatgcaatccccatcaaaattccaa
ctcaattcttcaacgaattagaaagggcaatcggtagatttatctggaat
aacagaaaacctaggatagcaaaaactcttctcaaggataaaagaacctc
tggtggaatcaccatgcccgacctaaagctgtactacagagcaattgtgg
taaaaactgcatggtactggtatagcaacagacaagtagaccaatggaac
agaattgaagacccagagatgaacccacacacctatggtcacttgatctt
tgacaagggaggtaaaaccatccagtggaaaaaagacagcattttcaaca
aatggtgctggcacaactgactgttatcatgtagaagattgcgaattgat
ccattcctatctccttgtactaaggtcaaatctaagtggattaaggaact
ccacataaaaccagagacactgaaacttatagaggagaaagtagggaaaa
gcctcgaagatatgggtacaggggaaaaattcctgaatagaacagcaatg
gcttgtgctgtaagatcgagaatcgataaatgggacctcataaaattgca
agcttctgcaaggcaaaagacactgtcaataagacaaaagaccacttaac
agattgcgaacggatctttacctatcccaaatcagacagggggactaata
tcaatatatataaagaactcaaggaagtagaggtccaataaaatcaatac
cccattaataaatggcctcaggactgacaaggatttcttcaccgagggat
acggaatgcagagaagcaccttgaaaaactgttcacatccttaatcatca
ggatgccaagtcaaaacaaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_89385706_89386137
seq2: B6Ng01-267C20.b_44_475 (reverse)

seq1  AAAACAAACACCCACACACTCATACACTACATGCAACAAATCTTATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACACCCACACACTCATACACTACATGCAACAAATCTTATTTCA  50

seq1  TACATTTATTATATATATAAAGGTGTTTTGTGTATATGTCCATCTGTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTATTATATATATAAAGGTGTTTTGTGTATATGTCCATCTGTAAC  100

seq1  CACATGCATGCTTGGTGACCATGGAGGCTAAAAGAGGGCATTGGACCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCATGCTTGGTGACCATGGAGGCTAAAAGAGGGCATTGGACCCTC  150

seq1  TGGGTACTGGAGTAGCACATGATTGTCTGCCACCATGTGGGTGGTGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTACTGGAGTAGCACATGATTGTCTGCCACCATGTGGGTGGTGGGAA  200

seq1  TTATTGCTCTTAACTTGTCTCTTAAACCCAAAAATATATTATTTTTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTCTTAACTTGTCTCTTAAACCCAAAAATATATTATTTTTAAAT  250

seq1  GACTTATTGCAAGCAATGCTTTCCTTTAATTATGTGGTATGTGGGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATTGCAAGCAATGCTTTCCTTTAATTATGTGGTATGTGGGTTTGA  300

seq1  TACCCTTGTGCTAGATTTTCATGAGTGCCCTAGTTCATCTGCCTCTAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTGTGCTAGATTTTCATGAGTGCCCTAGTTCATCTGCCTCTAGAA  350

seq1  CTTAGCATGTCACCTGAGTTTCAGCCCCTCCTCCCCAGCAACTTACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATGTCACCTGAGTTTCAGCCCCTCCTCCCCAGCAACTTACAAAA  400

seq1  CATACAAAGAACAAACCAAACCTTCAGAATTC  432
      ||||||||||||||||||||||||||||||||
seq2  CATACAAAGAACAAACCAAACCTTCAGAATTC  432