BAC Information

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BAC

Clone NameB6Ng01-268L05
Chromosome12 (Build37)
Map Location 49,575,871 - 49,576,969
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664891
Downstream geneGm1818, GA_x5J8B7W54VK-284379-285078, Olfr1399-ps1, EG665036, LOC100039366, Foxg1, ENSMUSG00000045946, LOC100039424
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268L05.bB6Ng01-268L05.g
ACCGA071489GA071490
length8691,092
definitionB6Ng01-268L05.b B6Ng01-268L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactccgctattaaaaagaatcagcatccaaacgctgacaccat
tgcatacactagcaagattttatcgaaaggacccagatgtagctgtctct
tgtgagactatgccggggcctagcaaacacagaagtggatgcccacagtc
agctaatggatggatcacagggctcccaatggaggagctagagaaagtac
ccaaggagctaaagggatctgcaaccctatagttggatcaacattatgaa
ccaaccagtaccccggagctcttgactctagctgcatatgtatcaaaaga
tggcctagtcggccatcactggaaagagaggcccattggacacacaaact
ttatatgccccagaacaggggaacgccagggccaaaaaggggagtgggcg
ggtaggggatttgggggtg

gaattcagcatttgaaagcaagtattattttgaagaatgggagaaatact
tgactatctgagttagaagggttgccaaaatgttttggaaacctagttga
tgctggagcacaaatttatagtgacatctggatttaactgcacaggtgca
aaggaagacagataattagattcgacctgatctaggattttgccaaacat
gtgctgaaaggacacagcgacaaaacactatacacatttagcagatcttg
gtgaaaataaagcacttattatccttctgaaatgactgggagataggtgg
cagtataatgatgcatgcttttttgttaaaatttactaattctgtatgct
tgattaataaatgtgtagcttatatgagaagcaagtcagggaatcacatt
ttagtacttaggggatttgaagtagctaaaagcagttgtaaatttatata
aattctttttataatatagatcagaattgttggtttccacatgatgttac
tcactcttacctggaaaggggatttccttggggcatatgtggtgcataaa
cacagtgccttcccacactgagttacatagctgcattcagtcttggaagt
catctttgtgaatagctcattatccatttgaaacttcttctgaataattt
cttatgcaacatgcaccgctcttgcctttatcccaagcaagccaatattc
atcatccagaaaaccatgtggcttttccaaactgggtcataatctaagct
tttcaaggacctgctactacatactaagtttattgaaaaaactttatttc
caccttgctgggtagaaaatatcatttaatggttattacctcaaagctca
aaaactgaatttctccaaaggcatcagaatccaattcactcaatagcact
ctctaattgcttgtgtttctctttgtcacttaggaaatatattttacttt
tatgattagaatagaactctgagactgctctaacaattcccacatttcta
attttctctacatcattcttatggaataaacttagtttataagttctatt
actcataaatattattgattccttgttatctttatatgagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_49575871_49576969
seq2: B6Ng01-268L05.g_64_1155 (reverse)

seq1  TACTCATTATAAAGGAATTAACAAGGAAATCAT-ATATTTATTGGAGTAA  49
      |||||| |||||||    ||||||||||   || ||||||||  ||||||
seq2  TACTCA-TATAAAG---ATAACAAGGAATCAATAATATTTAT--GAGTAA  44

seq1  TAGAACTTATAAACTAAGTTTATTCCATAAGAATTGATGTAGAGAAAATT  99
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAGAACTTATAAACTAAGTTTATTCCATAAGAA-TGATGTAGAGAAAATT  93

seq1  AGAAATGTGGGAATTGTTAGAGCAGTCTCAGAGTTCTATTCTAATCATAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGGGAATTGTTAGAGCAGTCTCAGAGTTCTATTCTAATCATAA  143

seq1  AAGTAAAATATATTTCCTAAGTGACAAAGAGAAACACAAGCAATTAGAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAATATATTTCCTAAGTGACAAAGAGAAACACAAGCAATTAGAGA  193

seq1  GTGCTATTGAGTGAATTGGATTCCTGATGCCTTTGGAGAAATTCAGTTTT  249
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGCTATTGAGTGAATTGGATT-CTGATGCCTTTGGAGAAATTCAGTTTT  242

seq1  TGAGCTTTGAGGTAATAACCATTAAATGATATTTTCTACCCAGCAAGGTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTTGAGGTAATAACCATTAAATGATATTTTCTACCCAGCAAGGTG  292

seq1  GAAATAAAGTTTTTTCAATAAACTTAGTATGTAGTAGCAGGTCCTTGAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAAGTTTTTTCAATAAACTTAGTATGTAGTAGCAGGTCCTTGAAA  342

seq1  AGCTTAGATTATGACCCAGTTTGGAAAAGCCACATGGTTTTCTGGATGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGATTATGACCCAGTTTGGAAAAGCCACATGGTTTTCTGGATGAT  392

seq1  GAATATTGGCTTGCTTGGGATAAAGGCAAGAGCGGTGCATGTTGCATAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTGGCTTGCTTGGGATAAAGGCAAGAGCGGTGCATGTTGCATAAG  442

seq1  AAATTATTCAGAAGAAGTTTCAAATGGATAATGAGCTATTCACAAAGATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTCAGAAGAAGTTTCAAATGGATAATGAGCTATTCACAAAGATG  492

seq1  ACTTCCAAGACTGAATGCAGCTATGTAACTCAGTGTGGGAAGGCACTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAAGACTGAATGCAGCTATGTAACTCAGTGTGGGAAGGCACTGTG  542

seq1  TTTATGCACCACATATGCCCCAAGGAAATCCCCTTTCCAGGTAAGAGTGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCACCACATATGCCCCAAGGAAATCCCCTTTCCAGGTAAGAGTGA  592

seq1  GTAACATCATGTGGAAACCAACAATTCTGATCTATATTATAAAAAGAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACATCATGTGGAAACCAACAATTCTGATCTATATTATAAAAAGAATT  642

seq1  TATATAAATTTACAACTGCTTTTAGCTACTTCAAATCCCCTAAGTACTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATTTACAACTGCTTTTAGCTACTTCAAATCCCCTAAGTACTAA  692

seq1  AATGTGATTCCCTGACTTGCTTCTCATATAAGCTACACATTTATTAATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGATTCCCTGACTTGCTTCTCATATAAGCTACACATTTATTAATCA  742

seq1  AGCATACAGAATTAGTAAATTTTAACAAAAAAGCATGCATCATTATACTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATACAGAATTAGTAAATTTTAACAAAAAAGCATGCATCATTATACTG  792

seq1  CCACCTATCTCCCAGTCATTTCAGAAGGATAATAAGTGCTTTATTTTCAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTATCTCCCAGTCATTTCAGAAGGATAATAAGTGCTTTATTTTCAC  842

seq1  CAAGATCTGCTAAATGTGTATAGTGTTTTGTCGCTGTGTCCTTTCAGCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTGCTAAATGTGTATAGTGTTTTGTCGCTGTGTCCTTTCAGCAC  892

seq1  ATGTTTGGCAAAATCCTAGATCAGGTCGAATCTAATTATCTGTCTTCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGGCAAAATCCTAGATCAGGTCGAATCTAATTATCTGTCTTCCTT  942

seq1  TGCACCTGTGCAGTTAAATCCAGATGTCACTATAAATTTGTGCTCCAGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTGTGCAGTTAAATCCAGATGTCACTATAAATTTGTGCTCCAGCA  992

seq1  TCAACTAGGTTTCCAAAACATTTTGGCAACCCTTCTAACTCAGATAGTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTAGGTTTCCAAAACATTTTGGCAACCCTTCTAACTCAGATAGTCA  1042

seq1  AGTATTTCTCCCATTCTTCAAAATAATACTTGCTTTCAAATGCTGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCTCCCATTCTTCAAAATAATACTTGCTTTCAAATGCTGAATTC  1092


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