BAC Information

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BAC

Clone NameB6Ng01-270B23
Chromosome12 (Build37)
Map Location 105,191,247 - 105,192,333
singlet/doubletsinglet
Overlap geneSerpina1e
Upstream gene9030205A07Rik, LOC667269, Prima1, EG544888, Asb2, Otub2, Ddx24, D12Ertd647e, Ifi27, 1810023F06Rik, 8430415E04Rik, Serpina10, Serpina6, Gm46, Serpina1f, EG435316, Serpina1b, Serpina1d, LOC667951, LOC628801, Serpina1a, LOC667954, Serpina1c
Downstream geneSerpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc, Dicer1, Clmn, 4831426I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B23.bB6Ng01-270B23.g
ACCGA072547GA072548
length1,1771,087
definitionB6Ng01-270B23.b B6Ng01-270B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
attgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatgtgggactgtttagaaggtcaacttgatcctgattcaaatt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgaatatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttttctaga
gcttttagatgtgttgtcaagctgctagtatgtgctctctcccgtttctt
catggaggcactcagagctatgaattcctcttagaaatgctttcattgtg
tccaaatgtttgggtacgttggtgcttcattttcataaactcttaaaagt
tctttattttcttttcctttattcttcttgaacacgatatcattgagaag
gttgtcagttccacgtgaaggttgcttctgtatttttttggtatgaggaa
tcacgcacatatgctccaagcggggtg
gaattcaaggcagaagcagagtaaggaggcatgcttttgtaatcaacccc
atccccgaggagatggacacaggaagatctctgccttgctgtcagcctct
gacttgaggtcacttggtatgttttcttgccaccctgtgaaagcccagct
tcttgacgaaggtggggaatttccagggggcttgctaaaatccaaacaag
acgtaacaaaaacatcaggaatggaaatatacagagctcaattcagtgtc
ctctccagccctaacacaccagcctgtttatgaaaacatcaacatgtact
gtgcaatccgtgttcggatctccagattatttacagtgaaagggcagaaa
gcacggtggtagctagagagacttctgtgctctgttgtgctataacgttg
gaaagatactttttacaggtcaagggcaggcaaaattcaatatttcttgt
cttcaactttcccccttgaggtttgcagatcccaaacttgagggtcttat
tgtattaagatgataattctagctatgggtctagggagtgtagctctctt
ggtagagtgttcacataagatacatgaagcccagagctacataaagaggt
catggtggtacacacctttcatcccaacactctagaagtagaaggatcag
atgttcagggccatcctcatctagatggtgagtttaaggctagcctgaga
catatgaggttctctcaaaagagtaaaataaaaaggatagtgatttcatt
attgaactaatagctgactatgtggtctggctgcctgaagattcttcata
gatgtggcctcagcttccccaatatgatgagagcatggggctgtagacta
gtagcctgtggcacgtcagagtaaagagaattctgtagaaccagggaggc
tggtgctgggggttgtgatcttgactttggctgtctgcaggcagagttgc
ccctccctggtgcaactcaagtcttgcttcacttcagccacacacaacat
gccctctctgaccctttttcaacttctgagcttgcagcatctgccacccg
ttcatcccccagattacccttttgggtgaactggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_105191247_105192333
seq2: B6Ng01-270B23.g_66_1152 (reverse)

seq1  GGACAAGTTCAC---AAAGGGTAATCTTGGGGATGGACGGGTGGCAGATG  47
      |||| |||||||   |||||||||||| ||||||| ||||||||||||||
seq2  GGACCAGTTCACCCAAAAGGGTAATCTGGGGGATGAACGGGTGGCAGATG  50

seq1  CTGCAAGCTCAGAGGTTGGAAAAAGGGGTCAGAGAAGGGCAATGTGTTGT  97
      ||||||||||||| ||||  |||| ||||||||| ||||| ||||  |||
seq2  CTGCAAGCTCAGAAGTTG--AAAAAGGGTCAGAG-AGGGC-ATGTTGTGT  96

seq1  GTGGCTGAAGTGAAGCAAGACTTGAGTTGCACCAGGGAGGGCAAACTCTG  147
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  GTGGCTGAAGTGAAGCAAGACTTGAGTTGCACCAGGGAGGGGCAACTCTG  146

seq1  CCTGCAGACAGCCAAAGTCAAGATCAC-ACCCCCAGCACCAGCCTCCCTG  196
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTGCAGACAGCCAAAGTCAAGATCACAACCCCCAGCACCAGCCTCCCTG  196

seq1  GTTCTACAGAATTCTCTTTACTCTGACGTGCCACAGGCTACTAGTCTACA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACAGAATTCTCTTTACTCTGACGTGCCACAGGCTACTAGTCTACA  246

seq1  GCCCCATGCTCTCATCATATTGGGGAAGCTGAGGCCACATCTATGAAGAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATGCTCTCATCATATTGGGGAAGCTGAGGCCACATCTATGAAGAA  296

seq1  TCTTCAGGCAGCCAGACCACATAGTCAGCTATTAGTTCAATAATGAAATC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGCAGCCAGACCACATAGTCAGCTATTAGTTCAATAATGAAATC  346

seq1  ACTATCCTTTTTATTTTACTCTTTTGAGAGAACCTCATATGTCTCAGGCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCTTTTTATTTTACTCTTTTGAGAGAACCTCATATGTCTCAGGCT  396

seq1  AGCCTTAAACTCACCATCTAGATGAGGATGGCCCTGAACATCTGATCCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTAAACTCACCATCTAGATGAGGATGGCCCTGAACATCTGATCCTT  446

seq1  CTACTTCTAGAGTGTTGGGATGAAAGGTGTGTACCACCATGACCTCTTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTCTAGAGTGTTGGGATGAAAGGTGTGTACCACCATGACCTCTTTA  496

seq1  TGTAGCTCTGGGCTTCATGTATCTTATGTGAACACTCTACCAAGAGAGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTCTGGGCTTCATGTATCTTATGTGAACACTCTACCAAGAGAGCT  546

seq1  ACACTCCCTAGACCCATAGCTAGAATTATCATCTTAATACAATAAGACCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCCTAGACCCATAGCTAGAATTATCATCTTAATACAATAAGACCC  596

seq1  TCAAGTTTGGGATCTGCAAACCTCAAGGGGGAAAGTTGAAGACAAGAAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTTGGGATCTGCAAACCTCAAGGGGGAAAGTTGAAGACAAGAAAT  646

seq1  ATTGAATTTTGCCTGCCCTTGACCTGTAAAAAGTATCTTTCCAACGTTAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATTTTGCCTGCCCTTGACCTGTAAAAAGTATCTTTCCAACGTTAT  696

seq1  AGCACAACAGAGCACAGAAGTCTCTCTAGCTACCACCGTGCTTTCTGCCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAACAGAGCACAGAAGTCTCTCTAGCTACCACCGTGCTTTCTGCCC  746

seq1  TTTCACTGTAAATAATCTGGAGATCCGAACACGGATTGCACAGTACATGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGTAAATAATCTGGAGATCCGAACACGGATTGCACAGTACATGT  796

seq1  TGATGTTTTCATAAACAGGCTGGTGTGTTAGGGCTGGAGAGGACACTGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTTCATAAACAGGCTGGTGTGTTAGGGCTGGAGAGGACACTGAA  846

seq1  TTGAGCTCTGTATATTTCCATTCCTGATGTTTTTGTTACGTCTTGTTTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCTGTATATTTCCATTCCTGATGTTTTTGTTACGTCTTGTTTGG  896

seq1  ATTTTAGCAAGCCCCCTGGAAATTCCCCACCTTCGTCAAGAAGCTGGGCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGCAAGCCCCCTGGAAATTCCCCACCTTCGTCAAGAAGCTGGGCT  946

seq1  TTCACAGGGTGGCAAGAAAACATACCAAGTGACCTCAAGTCAGAGGCTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGGTGGCAAGAAAACATACCAAGTGACCTCAAGTCAGAGGCTGA  996

seq1  CAGCAAGGCAGAGATCTTCCTGTGTCCATCTCCTCGGGGATGGGGTTGAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGGCAGAGATCTTCCTGTGTCCATCTCCTCGGGGATGGGGTTGAT  1046

seq1  TACAAAAGCATGCCTCCTTACTCTGCTTCTGCCTTGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAGCATGCCTCCTTACTCTGCTTCTGCCTTGAATTC  1087