BAC Information

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BAC

Clone NameB6Ng01-270P04
Chromosome12 (Build37)
Map Location 75,381,047 - 75,382,152
singlet/doubletsinglet
Overlap genenone
Upstream geneTrmt5, Slc38a6, EG666356, Tmem30b, 2210039B01Rik, Prkch, EG666385, LOC100041489, Hif1a, EG277089, Snapc1, Syt16
Downstream gene1700086L19Rik, Dbpht2, LOC671971, Kcnh5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270P04.bB6Ng01-270P04.g
ACCGA073157GA073158
length1,1671,119
definitionB6Ng01-270P04.b B6Ng01-270P04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctaaagaaatg
ttcaacatccttagtcatcaggtaaatgcaaatcaaaacaaccctaagct
tctatatcacaccagtcagaatgactaagatcaaaaactcaggtgacagc
agatgctggcaaggttgtggagaaagaggaacgctcctccattgctggtg
ggattgcaaactggacatagtactgcctgaggacccatctgtaccactac
tgggcatatacccagaagatgctccaacatgtaataaggacacatgctcc
actatgttcttagcaaccttatttatagtagacagaagctggaaagaatc
cagatgtccctcaacagaggaatggatacagaaaatgtggtacatttaca
caatggagtactatgcagctatttaaaataatgacttcatgaaattctta
ggcaatggatggaactagaaaatatccagagtgaggtaacccaatcacaa
aagaacacccatggtatacacttactaataagtggatattagctcagaag
ctcagaatacccaagatacaattcacagagcacatgaacctcaagaagaa
gaaagaccaaagtgtgaatacttcagtcctccttagaagggagatcaaag
tacccatgggatacagagacaaagtgtggaacagaaactgaaggaaaggt
cattgagtgactgtcccacctggggatccatcccatatatagctaccaaa
cccagacactattgtggatgccaacaaatgcttcctgataggagcctgat
atagctgcctcctgagaggctctgccagtgcctgacaaataaagaagtgg
atgctcacaaccatccattgggattgagcacagggtccccaatgggagga
gctagagaaaagacccaagggagctgaaaggatttgcagccccataggag
gaacaacaatatgaaaccaaccattatccccaggagctcccagggactaa
accacaaccaaagagtacatgtggagggactatggctccagctgcatatg
taacagagatggctgttgggtcatcataggagaagtccttggtctggtga
gctcaatgccccagtgttagggaaatcatgactggaaaccggagtggggg
gtggttgcgtgagctag
gaattctcttagacagcatctcacaccctgagagcatctattctgttcat
cctctgaaatgagtttctttccagtgttgtcactatggtagtgctgagct
cgcttctccccccctcccccgcccccaagttccctctcacccatggctac
actaggacattataggctggccaaagtgatctgcttgttatattgtattt
caagcactccagggctgtggggacactggtgaaatgatggctctaagtcc
agggttaagggctggattctgagctggaagcctgggcgaggctggatgct
tctatgtgtgggccacagtgagccccaagtgctgcattaaggtatcaaaa
cacacatcttaagttgtaaagaaagaagaaaagaggagaaacgggtcttc
ggtaatctatgcttagaccgtatcatctggaacctccagaactctgccta
ggagttctgctgcttcctcattcttcaactgacacattcccatccttaag
agctggagtggtaccccattccatggccatggatcttttccccttgtgtt
ttctagcccatatggtagttttttaaaaagcctataacatggcttattta
taacataaaacccctgtttacatctttgacttgtttcttgacatagcaat
tacatcattcccactttgctctccttcctcccaggccctcctatatactc
ctccatgttctctttcaaattcatggcctatttttaaaataattattgtt
atatgcatttctgtatatgaatatatatatatatatatatatatatatat
atatatatatattcctaaatacacaaatacaacctgttcagtctctatag
tgttacttgcatatgtgtttttggtttggataaccagttggtgttatctt
tttctctaaggaagactatattttcttcccatgcttgtcagtccttagtt
aacagttagttgcattgtgtaggggtttactttgcaaacatgaaccaacc
tcagattacatttttacaaggaacttgcatcataataaaccttaagcttc
ctctgagctcgaggttttctggggatgtttctcccggaccgacttagcga
attacgacatcaaacggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_75381047_75382152
seq2: B6Ng01-270P04.g_67_1185

seq1  GAATTCTCTTAGACAGCATCTCACACCCTGAGAGCATCTATTCTGTTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGACAGCATCTCACACCCTGAGAGCATCTATTCTGTTCAT  50

seq1  CCTCTGAAATGAGTTTCTTTCCAGTGTTGTCACTATGGTAGTGCTGAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAAATGAGTTTCTTTCCAGTGTTGTCACTATGGTAGTGCTGAGCT  100

seq1  CGCTTCTCCCCCCCTCCCCCGCCCCCAAGTTCCCTCTCACCCATGGCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTCTCCCCCCCTCCCCCGCCCCCAAGTTCCCTCTCACCCATGGCTAC  150

seq1  ACTAGGACATTATAGGCTGGCCAAAGTGATCTGCTTGTTATATTGTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGACATTATAGGCTGGCCAAAGTGATCTGCTTGTTATATTGTATTT  200

seq1  CAAGCACTCCAGGGCTGTGGGGACACTGGTGAAATGATGGCTCTAAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTCCAGGGCTGTGGGGACACTGGTGAAATGATGGCTCTAAGTCC  250

seq1  AGGGTTAAGGGCTGGATTCTGAGCTGGAAGCCTGGGCGAGGCTGGATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTAAGGGCTGGATTCTGAGCTGGAAGCCTGGGCGAGGCTGGATGCT  300

seq1  TCTATGTGTGGGCCACAGTGAGCCCCAAGTGCTGCATTAAGGTATCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGTGTGGGCCACAGTGAGCCCCAAGTGCTGCATTAAGGTATCAAAA  350

seq1  CACACATCTTAAGTTGTAAAGAAAGAAGAAAAGAGGAGAAACGGGTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATCTTAAGTTGTAAAGAAAGAAGAAAAGAGGAGAAACGGGTCTTC  400

seq1  GGTAATCTATGCTTAGACCGTATCATCTGGAACCTCCAGAACTCTGCCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATCTATGCTTAGACCGTATCATCTGGAACCTCCAGAACTCTGCCTA  450

seq1  GGAGTTCTGCTGCTTCCTCATTCTTCAACTGACACATTCCCATCCTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCTGCTGCTTCCTCATTCTTCAACTGACACATTCCCATCCTTAAG  500

seq1  AGCTGGAGTGGTACCCCATTCCATGGCCATGGATCTTTTCCCCTTGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAGTGGTACCCCATTCCATGGCCATGGATCTTTTCCCCTTGTGTT  550

seq1  TTCTAGCCCATATGGTAGTTTTTTAAAAAGCCTATAACATGGCTTATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCCCATATGGTAGTTTTTTAAAAAGCCTATAACATGGCTTATTTA  600

seq1  TAACATAAAACCCCTGTTTACATCTTTGACTTGTTTCTTGACATAGCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAAAACCCCTGTTTACATCTTTGACTTGTTTCTTGACATAGCAAT  650

seq1  TACATCATTCCCACTTTGCTCTCCTTCCTCCCAGGCCCTCCTATATACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATTCCCACTTTGCTCTCCTTCCTCCCAGGCCCTCCTATATACTC  700

seq1  CTCCATGTTCTCTTTCAAATTCATGGCCTATTTTTAAAATAATTATTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTTCTCTTTCAAATTCATGGCCTATTTTTAAAATAATTATTGTT  750

seq1  ATATGCATTTCTGTATATGAATATATATATATATATATATATATATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATTTCTGTATATGAATATATATATATATATATATATATATATAT  800

seq1  ATATATATATATTCCTAAATACACAAATACAACCTGTTCAGTCTCTATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATTCCTAAATACACAAATACAACCTGTTCAGTCTCTATAG  850

seq1  TGTTACTTGCATATGTGTTTTTGGTTTGGATAACCAGTTGGTGTTATCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTGCATATGTGTTTTTGGTTTGGATAACCAGTTGGTGTTATCTT  900

seq1  TTTCTCTAAGGAAGACTATATTT--CTCCCATGCTTGTCAGTCCTTAGTT  948
      |||||||||||||||||||||||   ||||||||||||||||||||||||
seq2  TTTCTCTAAGGAAGACTATATTTTCTTCCCATGCTTGTCAGTCCTTAGTT  950

seq1  ACCAG-TAG-TGCTTTGTGTAGGG--TTACTTTGCAAACATGAACC-ACC  993
      | ||| ||| ||| ||||||||||  |||||||||||||||||||| |||
seq2  AACAGTTAGTTGCATTGTGTAGGGGTTTACTTTGCAAACATGAACCAACC  1000

seq1  TCCAGTAACATTTTACCAAGGAAC-TGCATCAT-ATAAACCTTAAAGCTT  1041
      ||   | |||||||  |||||||| |||||||| ||||||||| ||||||
seq2  TCAGATTACATTTTTACAAGGAACTTGCATCATAATAAACCTT-AAGCTT  1049

seq1  CCTCTGAGCCTCAGAGTTTCTGGGGATGTTTCTCCGGGA-CGACTT-GCG  1089
      |||||||||   ||  ||||||||||||||||||| ||| |||||| |||
seq2  CCTCTGAGCTCGAGGTTTTCTGGGGATGTTTCTCCCGGACCGACTTAGCG  1099

seq1  -ATTAC-AGCTC-AACGGGA  1106
       ||||| |  || |||||||
seq2  AATTACGACATCAAACGGGA  1119