BAC Information

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BAC

Clone NameB6Ng01-272C18
Chromosome12 (Build37)
Map Location 93,312,671 - 93,313,770
singlet/doubletsinglet
Overlap genenone
Upstream gene4930534B04Rik, Tshr, Gtf2a1, Ston2, EG666955, LOC100039631, Sel1l, LOC100039367, EG432681, LOC667589, LOC100039387
Downstream geneLOC100039425, LOC628116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272C18.bB6Ng01-272C18.g
ACCGA074065GA074066
length1,1891,095
definitionB6Ng01-272C18.b B6Ng01-272C18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatgggaatagaattgaag
atccagaaatgaacccacacacctatggtcacttgatcttcgacaaggga
gctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctg
gcacaactgggttgttatcgtgtagaagaatgcgaatcgatcatactatc
tcctttgtactaggtcaaatctaagtgatcagacttcacataaaaccaga
gaacactgaactatagaggagaaagtggggaaagctgaagatttggcaca
ggcaactcctgaccgaacagccattgcttggtctgtagatcggaatcgac
atggacctatgaacttcaaagttctgcagcctaaggaac
gaattcccttagtacttcgttaaccaatattgtaatctgggaaggggcaa
atctatctgtgataaatgtaaaaatagttgcgattttaaagaaaacatga
attctactaaggttgacatggtagctgagacgatgaatacagactttaga
aaatggttagttttaatcagagtatctcccagccaaaaattttgactttc
tgaacatattaggtttgtttcagttgcttcttttggataggaagttggaa
gttttgaatgtcactttgcattttttattttaacttcaaacggttttaat
attctgttgccaacttctccaatgatatatcagctcttggtttgtatctg
tagccatttaaaatttaaatcacattagatcgcagtgaaataatcacaat
tttaaattaaattaaattttaattttaaattaaattgagtttcaatttga
aaggaaattaaatctttatttcaaattaggtccaattttcagttatttta
attaaggtaagatataattacattaagtatttaaattaaattaagaattt
aagcacaaatgcaaatgcatcttaaagaatgaaaaataaccttgggccag
caagatggctcaggatgtaaaggggcttgctgccgtgcccaacaagctaa
gtcaggttcttggacactcttggtggaaggggagaaccaattcagacaag
tttcctccaacctccacgagtgtagagtggcatgtgtgtttgtgtgtgtg
cacatgtgtgtgcactggtgcacgtatacataccagttaaatgaatatat
aaaatacaaatacaaacacaaattgtctaaacacacaggaaataaaaaat
attttgctaataggagacaatttgtatatatgtttattaaaatgctgaat
ctaagagggcccaactagcttggagtatgtcaagaaaggacagctgttca
gaatactttctgaaggtagattgcatgacagcatatctgatgttcctcag
ctataaatcagaaaatacaaagggagacttgtacatgcacagacgctata
cctccactatttgataagacacagtaaagtaaaatgagttttaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_93312671_93313770
seq2: B6Ng01-272C18.g_65_1159

seq1  GAATTCCCTTAGTACTTCGTTAACCAATATTGTAATCTGGGAAGGGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTAGTACTTCGTTAACCAATATTGTAATCTGGGAAGGGGCAA  50

seq1  ATCTATCTGTGATAAATGTAAAAATAGTTGCGATTTTAAAGAAAACATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTGTGATAAATGTAAAAATAGTTGCGATTTTAAAGAAAACATGA  100

seq1  ATTCTACTAAGGTTGACATGGTAGCTGAGACGATGAATACAGACTTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACTAAGGTTGACATGGTAGCTGAGACGATGAATACAGACTTTAGA  150

seq1  AAATGGTTAGTTTTAATCAGAGTATCTCCCAGCCAAAAATTTTGACTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTTAGTTTTAATCAGAGTATCTCCCAGCCAAAAATTTTGACTTTC  200

seq1  TGAACATATTAGGTTTGTTTCAGTTGCTTCTTTTGGATAGGAAGTTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATATTAGGTTTGTTTCAGTTGCTTCTTTTGGATAGGAAGTTGGAA  250

seq1  GTTTTGAATGTCACTTTGCATTTTTTATTTTAACTTCAAACGGTTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAATGTCACTTTGCATTTTTTATTTTAACTTCAAACGGTTTTAAT  300

seq1  ATTCTGTTGCCAACTTCTCCAATGATATATCAGCTCTTGGTTTGTATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTGCCAACTTCTCCAATGATATATCAGCTCTTGGTTTGTATCTG  350

seq1  TAGCCATTTAAAATTTAAATCACATTAGATCGCAGTGAAATAATCACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATTTAAAATTTAAATCACATTAGATCGCAGTGAAATAATCACAAT  400

seq1  TTTAAATTAAATTAAATTTTAATTTTAAATTAAATTGAGTTTCAATTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTAAATTAAATTTTAATTTTAAATTAAATTGAGTTTCAATTTGA  450

seq1  AAGGAAATTAAATCTTTATTTCAAATTAGGTCCAATTTTCAGTTATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATTAAATCTTTATTTCAAATTAGGTCCAATTTTCAGTTATTTTA  500

seq1  ATTAAGGTAAGATATAATTACATTAAGTATTTAAATTAAATTAAGAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGTAAGATATAATTACATTAAGTATTTAAATTAAATTAAGAATTT  550

seq1  AAGCACAAATGCAAATGCATCTTAAAGAATGAAAAATAACCTTGGGCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACAAATGCAAATGCATCTTAAAGAATGAAAAATAACCTTGGGCCAG  600

seq1  CAAGATGGCTCAGGATGTAAAGGGGCTTGCTGCCGTGCCCAACAAGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGGCTCAGGATGTAAAGGGGCTTGCTGCCGTGCCCAACAAGCTAA  650

seq1  GTCAGGTTCTTGGACACTCTTGGTGGAAGGGGAGAACCAATTCAGACAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTTCTTGGACACTCTTGGTGGAAGGGGAGAACCAATTCAGACAAG  700

seq1  TTTCCTCCAACCTCCACGAGTGTAGAGTGGCATGTGTGTTTGTGTGTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCAACCTCCACGAGTGTAGAGTGGCATGTGTGTTTGTGTGTGTG  750

seq1  CACATGTGTGTGCACTGGTGCACGTATACATACCAGTTAAATGAATATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTGTGTGCACTGGTGCACGTATACATACCAGTTAAATGAATATAT  800

seq1  AAAATACAAATACAAACACAAATTGTCTAAACACACAGGAAATAAAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAAATACAAACACAAATTGTCTAAACACACAGGAAATAAAAAAT  850

seq1  ATTTTGCTAATAGGAGACAATTTGTATATATGTTTATTAAAATGCTGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTAATAGGAGACAATTTGTATATATGTTTATTAAAATGCTGAAT  900

seq1  CTAAGAGGG-CCAACTAGCTTGGAGTATGTCAAGAAAGGACAGCTGTTCA  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGGCCCAACTAGCTTGGAGTATGTCAAGAAAGGACAGCTGTTCA  950

seq1  GAATACTTTCTGAAGGTAGATTGCATGAACAGCATATCTGATGTTCCTCA  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAATACTTTCTGAAGGTAGATTGCATG-ACAGCATATCTGATGTTCCTCA  999

seq1  GCTATAAATCAGAAAATACAAAGGAAGACTTGTACATGGCAACAGAACGC  1049
      |||||||||||||||||||||||| |||||||||||||   |||| ||||
seq2  GCTATAAATCAGAAAATACAAAGGGAGACTTGTACATG--CACAG-ACGC  1046

seq1  TTATTACT-CACTATTTGATAAGACACAGGTAAAGGTAAAATGAGTTTTA  1098
       |||  || ||||||||||||||||||| ||||| |||||||||||||||
seq2  -TATACCTCCACTATTTGATAAGACACA-GTAAA-GTAAAATGAGTTTTA  1093

seq1  AA  1100
      ||
seq2  AA  1095