BAC Information

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BAC

Clone NameB6Ng01-273I24
Chromosome12 (Build37)
Map Location 86,222,979 - 86,224,115
singlet/doubletsinglet
Overlap genenone
Upstream gene2410016O06Rik, Acot2, Acot1, Acot4, Acot3, Acot5, LOC666963, Acot6, Dnalc1, Pnma1, C130039O16Rik, EG432676, Zadh1, Zfp410, 9830169C18Rik, Coq6, Entpd5, 2900006K08Rik, Rnf113a2, Aldh6a1, Lin52, Chx10, Abcd4, 7420416P09Rik, Tmem90a, Npc2, Isca2, Ltbp2
Downstream gene1110018G07Rik, Fcf1, Ylpm1, Prox2, Dlst, Rps6kl1, LOC100042021, Pgf, Eif2b2, Mlh3, Acyp1, 2810002I04Rik, Nek9, Tmed10, LOC100042549, LOC667119, Fos, EG667124, Jundm2, LOC100042073, Batf, BC011209, 0610007P14Rik, Ttll5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273I24.bB6Ng01-273I24.g
ACCGA075104GA075105
length1,0181,128
definitionB6Ng01-273I24.b B6Ng01-273I24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcctttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttcccctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacaggataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcgggctggtgagatggctcagtgggtaagagcacccgactg
ctcttccgaaggtccagagttcaaatcccagcaaccacatggtggctcac
aaccatctgtaacaagatctgatgccctcttctggagtgtctgaagacaa
ctacagtgtacttacatataataaataaataaataaataaaaaaaaaaaa
aaaaaaaaaaaaaaaagaaaatgctgtctttcttccactggatggtttta
gctcccttgtcgaagatcaagtgaccataggtgtgtgggttcatttctgg
gtcttcaattctattccattggtctacttatctgtttctataccagtacc
atgcagtttttatcacaattgctctgtagtaaagctttaggtctggcatg
gtgattccaccagaaagttctttttatccttgagaagactttttgctatc
cctaggttttttgttattccagacgaattttgcaaattgctcctttccaa
ttcattgaaagaattgagttgggaattttgatgggattgcattggatctg
tagattgctttggcaaga
gaattctagaagactctatccaccctagttagagactgaaggaatatgtg
caagtaagttggaaatgacatctcagcttagtactacatatacagagact
tcagatcagttccagggccagggaatgaaggggacagagtggaatcagtt
atattaaaaaggcacacttttcacatctttgctggataccctggggcaca
gcgtgctacagtggagaaattacagactttggagcgactcaggcttttca
gatgagtcctggctggtctgctctcctgtgcaaccttgagcaagatactt
tactcctgcgcatttgtgacctggagcttgcctgccctgtggctgcacag
gcattccgtttgtatctctcctttccttttcccaaagagaaaatctgaga
tctaggtgagcctgagccagtgatggcaagccattcacagaaggctgaat
gtgacctccttccttctccttggtgaggggcattggggtctctgaaacta
accatgttggctttggcctgctgatcaacagggctgacgggtcttgtttg
ggactaacaacagttccaaggccatcattatccttactgtaccctgaatg
ctgagtccttccatcatccagagaatcatggctggaggtgctctccctgc
ccttggaagctggtgtggcctgaatgtctggctagaagggccaggacaga
gtctctatgtaactgctatagcagtgactatggacatgtcattttacctc
cttcggtcttcttcacctactatatggtaaaatgtcacactcccttcaca
ggattattccgaaaattaagtaagaaaatgaatgtagggctcttagccca
gagcctggcactctttaagcgccacagggagcatcagtaatctgtcccct
cccatgacagagcatcatttctccgaaggagagaatagcagaagggtacc
attatctccgttttcaatgagaaatagcagccagggagctctgaactgag
ctcatttacagatgcagccttccggaccggtctacacatcagatgctcga
tcctctggctggccattcatgccaatggctgataacctcagcagccatgt
tcttctgcttcctgggaggggagaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_86222979_86224115
seq2: B6Ng01-273I24.g_69_1196 (reverse)

seq1  TGCCTCT-CCCTCCCAGGGAGCAG-AGAACATGCTGGCTGAGGGTTATCA  48
      ||||||| |||||||||| ||||| ||||||||   ||||| ||||||||
seq2  TGCCTCTCCCCTCCCAGGAAGCAGAAGAACATGGCTGCTGA-GGTTATCA  49

seq1  GCCATT-GCATGAATGCCCAGGCAGA-GATCGAGCAATCTGATGTTGTAG  96
      |||||| ||||||||| |||| |||| |||||||| |||||||| |||||
seq2  GCCATTGGCATGAATGGCCAGCCAGAGGATCGAGC-ATCTGATG-TGTAG  97

seq1  ACCGTTCCGGAAGGGCTGCCTTCTGTAAATGGAGCTCAGTTCAGAGCTTC  146
      |||| ||||||| ||||| | ||||||||| |||||||||||||||||  
seq2  ACCGGTCCGGAA-GGCTG-CATCTGTAAAT-GAGCTCAGTTCAGAGCT--  142

seq1  CCTTGGCTGCTATTTTCTCATTTGAAAACGGAGATAATGGTACCCTTTCT  196
      || ||||||||| ||||||| ||||||||||||||||||||||||||   
seq2  CCCTGGCTGCTA-TTTCTCA-TTGAAAACGGAGATAATGGTACCCTT--C  188

seq1  TGCTATTCTCTCCTTCGGAGAAAATGATGCTCTGTCATGGGAGGGGACAG  246
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCTATTCTCTCCTTCGGAG-AAATGATGCTCTGTCATGGGAGGGGACAG  237

seq1  ATTACTGATGCTCCCTGTGGCGCTTAAAGAGTGCCAGGCTCTGGGCTAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGATGCTCCCTGTGGCGCTTAAAGAGTGCCAGGCTCTGGGCTAAG  287

seq1  AGCCCTACATTCATTTTCTTACTTAATTTTCGGAATAATCCTGTGAAGGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTACATTCATTTTCTTACTTAATTTTCGGAATAATCCTGTGAAGGG  337

seq1  AGTGTGACATTTTACCATATAGTAGGTGAAGAAGACCGAAGGAGGTAAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGACATTTTACCATATAGTAGGTGAAGAAGACCGAAGGAGGTAAAA  387

seq1  TGACATGTCCATAGTCACTGCTATAGCAGTTACATAGAGACTCTGTCCTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGTCCATAGTCACTGCTATAGCAGTTACATAGAGACTCTGTCCTG  437

seq1  GCCCTTCTAGCCAGACATTCAGGCCACACCAGCTTCCAAGGGCAGGGAGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCTAGCCAGACATTCAGGCCACACCAGCTTCCAAGGGCAGGGAGA  487

seq1  GCACCTCCAGCCATGATTCTCTGGATGATGGAAGGACTCAGCATTCAGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCCAGCCATGATTCTCTGGATGATGGAAGGACTCAGCATTCAGGG  537

seq1  TACAGTAAGGATAATGATGGCCTTGGAACTGTTGTTAGTCCCAAACAAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAAGGATAATGATGGCCTTGGAACTGTTGTTAGTCCCAAACAAGA  587

seq1  CCCGTCAGCCCTGTTGATCAGCAGGCCAAAGCCAACATGGTTAGTTTCAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTCAGCCCTGTTGATCAGCAGGCCAAAGCCAACATGGTTAGTTTCAG  637

seq1  AGACCCCAATGCCCCTCACCAAGGAGAAGGAAGGAGGTCACATTCAGCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCAATGCCCCTCACCAAGGAGAAGGAAGGAGGTCACATTCAGCCT  687

seq1  TCTGTGAATGGCTTGCCATCACTGGCTCAGGCTCACCTAGATCTCAGATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAATGGCTTGCCATCACTGGCTCAGGCTCACCTAGATCTCAGATT  737

seq1  TTCTCTTTGGGAAAAGGAAAGGAGAGATACAAACGGAATGCCTGTGCAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTGGGAAAAGGAAAGGAGAGATACAAACGGAATGCCTGTGCAGC  787

seq1  CACAGGGCAGGCAAGCTCCAGGTCACAAATGCGCAGGAGTAAAGTATCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGCAGGCAAGCTCCAGGTCACAAATGCGCAGGAGTAAAGTATCTT  837

seq1  GCTCAAGGTTGCACAGGAGAGCAGACCAGCCAGGACTCATCTGAAAAGCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGGTTGCACAGGAGAGCAGACCAGCCAGGACTCATCTGAAAAGCC  887

seq1  TGAGTCGCTCCAAAGTCTGTAATTTCTCCACTGTAGCACGCTGTGCCCCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCGCTCCAAAGTCTGTAATTTCTCCACTGTAGCACGCTGTGCCCCA  937

seq1  GGGTATCCAGCAAAGATGTGAAAAGTGTGCCTTTTTAATATAACTGATTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCCAGCAAAGATGTGAAAAGTGTGCCTTTTTAATATAACTGATTC  987

seq1  CACTCTGTCCCCTTCATTCCCTGGCCCTGGAACTGATCTGAAGTCTCTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGTCCCCTTCATTCCCTGGCCCTGGAACTGATCTGAAGTCTCTGT  1037

seq1  ATATGTAGTACTAAGCTGAGATGTCATTTCCAACTTACTTGCACATATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAGTACTAAGCTGAGATGTCATTTCCAACTTACTTGCACATATTC  1087

seq1  CTTCAGTCTCTAACTAGGGTGGATAGAGTCTTCTAGAATTC  1137
      |||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTCTCTAACTAGGGTGGATAGAGTCTTCTAGAATTC  1128