BAC Information

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BAC

Clone NameB6Ng01-273J13
Chromosome12 (Build37)
Map Location 57,571,220 - 57,571,775
singlet/doubletsinglet
Overlap genenone
Upstream geneNfkbia, Aldoa-ps1, Insm2, Garnl1, Brms1l, LOC100039915, LOC382600, LOC382601, Mbip, EG621837
Downstream geneE030019B13Rik, Titf1, LOC100039993, Nkx2-9, Pax9, Slc25a21, AU021838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273J13.bB6Ng01-273J13.g
ACCGA075130GA075131
length472550
definitionB6Ng01-273J13.b B6Ng01-273J13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cattcctaaccaaaacgctctctaattagcaaccatttgttaactccaaa
ggcgtcgtactgagtaaacaaacttcgtttaatgtcaggctctatgccca
gcagctaatggacaacacaaaacgaattcattggtatttttggagattct
tttaaaaatcgcatattacttcatttggtcatttttgttttttaccttac
cgtttgcttgattgtaggttatggattctgattttgtgtttttatttttt
atttcatgtgtgtttgtgtgcatgtgcatgtatgtgtttcttatgtttct
ctttgactttttcaccgtgttttattggtttgtttgttttctaaaaagaa
agagaaaaatggcttgggattgggtggttgtggagtgggaagaacctggg
agaagggggaggggaacctcacttgctttttgggtggggagggccttatt
ttctcttaccacaatattaaca
agagcaaataggcctggtataatcaaatggatctttaaaactgactaacc
attccttgtgtggggaagcatgactacagaaaaagtgggagagctatagt
ggcattgaccttgaagaaccttgagctaaggagtggtttgtggcctctaa
gagctagagccagatttctcccaagatttctggtgatgccttgattttaa
tccagttgggcccattttggacactagcctctagaattgtaaggtaagcc
atctatattgcttgtgccacgaactctgtggtagtgtgttggccagcaca
ggaaactaacgcaacttggtagagtagttggctaaatctgctgccacagt
ttatctcccttgaatcctttaagaattttcatgacatttctttctcctgt
gggttttctagaagcaaatcaccccgctcttgaagcctcctgcaatatta
cctcagcatatagctccccacaggagcggtctgcacggaatgctacattt
tctccctcagtaagtggagtggagggggcccgtgtgggagggggagggca

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_57571220_57571775
seq2: B6Ng01-273J13.g_65_620

seq1  GAATTCAGAGCAAATAGGCCTGGTATAATCAAATGGATCTTTAAAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCAAATAGGCCTGGTATAATCAAATGGATCTTTAAAACTGA  50

seq1  CTAACCATTCCTTGTGTGGGGAAGCATGACTACAGAAAAAGTGGGAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCATTCCTTGTGTGGGGAAGCATGACTACAGAAAAAGTGGGAGAGC  100

seq1  TATAGTGGCATTGACCTTGAAGAACCTTGAGCTAAGGAGTGGTTTGTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGGCATTGACCTTGAAGAACCTTGAGCTAAGGAGTGGTTTGTGGC  150

seq1  CTCTAAGAGCTAGAGCCAGATTTCTCCCAAGATTTCTGGTGATGCCTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAGAGCTAGAGCCAGATTTCTCCCAAGATTTCTGGTGATGCCTTGA  200

seq1  TTTTAATCCAGTTGGGCCCATTTTGGACACTAGCCTCTAGAATTGTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCCAGTTGGGCCCATTTTGGACACTAGCCTCTAGAATTGTAAGG  250

seq1  TAAGCCATCTATATTGCTTGTGCCACGAACTCTGTGGTAGTGTGTTGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCATCTATATTGCTTGTGCCACGAACTCTGTGGTAGTGTGTTGGCC  300

seq1  AGCACAGGAAACTAACGCAACTTGGTAGAGTAGTTGGCTAAATCTGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGAAACTAACGCAACTTGGTAGAGTAGTTGGCTAAATCTGCTGC  350

seq1  CACAGTTTATCTCCCTTGAATCCTTTAAGAATTTTCATGACATTTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTTATCTCCCTTGAATCCTTTAAGAATTTTCATGACATTTCTTTC  400

seq1  TCCTGTGGGTTTTCTAGAAGCAAATCACCCCGCTCTTGAAGCCTCCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGGGTTTTCTAGAAGCAAATCACCCCGCTCTTGAAGCCTCCTGCA  450

seq1  ATATTACCTCAGCATATAGCTCCCCACAGGAGCGGTCTGCACGGAATGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACCTCAGCATATAGCTCCCCACAGGAGCGGTCTGCACGGAATGCT  500

seq1  ACATTTTCTCCCTCAGTAAGTGGAGTGGAGGGGGCCCGTGTGGGAGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTCCCTCAGTAAGTGGAGTGGAGGGGGCCCGTGTGGGAGGGGG  550

seq1  AGGGCA  556
      ||||||
seq2  AGGGCA  556