BAC Information

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BAC

Clone NameB6Ng01-274C15
Chromosome12 (Build37)
Map Location 67,764,812 - 67,899,346
singlet/doubletdoublet
Overlap geneMdga2
Upstream geneLOC100040700, EG238217
Downstream geneLOC100040745
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274C15.bB6Ng01-274C15.g
ACCGA075541GA075542
length1,1951,134
definitionB6Ng01-274C15.b B6Ng01-274C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,764,812 - 67,766,006)(67,898,214 - 67,899,346)
sequence
gaattctcataaataccaaaatagtctcataagtgccatatgtaagaata
tgttcacacttatggctaccacgtaaatggcatttgacatttcctaatgg
ctatcactggttatttaaaaaagaataacataggtgacatgaattggtac
catttgctggtcctttgatgttcaaaattagtattttgaattcatatttc
caacaaatgtcaaaatgccccttcacttctataagtaaaactgtgttcaa
agttaaaggcatatcttactatattgttcttttaaaaattagatttggaa
ataattatacaatgctctggaggtagaaattcctgggatggcataatacc
tttggaactcttttaaaaatgtatttccttaatatttatggaggtgatta
tgctgcacgtaatcccagcataaatagtgagactggaagaagggatgcag
tgaccctcacctacctacttccttgcaataaacttaataaagcatttttt
tgagaaggaggagcaagagttaaagaaaagagaaaaagaaaataatcgaa
taactctacttaaaactctttcaatgaattagatgttttgttctactgtg
gatttatacccttggagtcctggcattcctttctcagatgactgcttcca
tctgctaacttctccccctgcaccctacatccagttctcctccagctatc
tactttagaagtttcagtatttttcttccttaagctatttcttcagacga
agagcttgtgtagctctcacttaaatatttctctttatcaattttctctt
tacacagacatttctcaaactgtctgtggctcatttcatgataaaatggc
gatataccagttgcctcaagtgttattgcatgtgttcagtcacttggata
ggttacacacagctgttcttggaggtactttggccttaaaggctctgaga
ccagaactgggccttttgattgactaacgcagtaaaatgttctagttcct
tcacacttcatattaattatatgttcattttaatttcttcattgttacaa
caccacttaggacaatcagcaagtggcttttgctcaatttgccatcattg
tcatccatgcacccccaattcaggatgaatcaaacaccaaatgaaaaatc
caagtcttgtcaggagagtatttctgaattattgtgacacaattg

gaattccaattttcaaaatagcgaatcatttgtaggcttattaaagcaaa
gccattaaataaaaaaaaaaactcttttaaaaaccaggtgtataaaatta
tacataatctcaataagccattatggtaatatgcctacattatctaaacc
aacaagaaatttctaaataaaataatgaagcttgtccaaaatgaaatgag
agtctatttcttctaaataataaaaagtacttaccaaagttcagaaatgt
atgagaaaaattgtgatgcgcagtagacacagaaactgaatcatgtttct
actatgttttgccttcaacctgattggactattgacaaatttcatgcagc
tgaatccaaatgatgtgtactctaaagcgaagacattggtgcttgcaatt
ttgggattcaatttggtacatatattttaattctccacaaacatgatgga
aaagggccacagtggctctacagggcatctcttcagatgactaactgctg
cttgattgtctgtggaaaaccaacctaaagtaacaatctttgttggtgct
tgctcagatcaggtggaccaaaacagcaggaagcgcctctgacagattcc
aagactcaagtgtcttcaatgagactttgaggattacaaacattcagaga
caccaaggaggccgatattactgtaaagcagagaatggcttggggtcacc
agcaataaagtcgatccgagtggatgtgtactgtaagtaaactttggctg
actattgtgcctactaatttacttccatgcttaactatggttttctgaaa
acatataaatatcatttgttcctttgtgactgaacattttataggatagt
gatagtgcttcacaaaatgtctttttctttttattttttattagatattt
tcttcttttacatttcaaatgctatcccaaaagtcccctatacccttccc
ccaacctgctctcctaccccactcactcgcacttctggtcctgactttcc
cctgtactggggcatataaagttgctagaccaaagggctcttggctaaca
agaccaactaggccatcttctgcctacatatgcagctagagacaccgagt
ttctgggggtactgaatagtcaattctgttgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_67764812_67766006
seq2: B6Ng01-274C15.b_43_1237

seq1  GAATTCTCATAAATACCAAAATAGTCTCATAAGTGCCATATGTAAGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATAAATACCAAAATAGTCTCATAAGTGCCATATGTAAGAATA  50

seq1  TGTTCACACTTATGGCTACCACGTAAATGGCATTTGACATTTCCTAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACACTTATGGCTACCACGTAAATGGCATTTGACATTTCCTAATGG  100

seq1  CTATCACTGGTTATTTAAAAAAGAATAACATAGGTGACATGAATTGGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACTGGTTATTTAAAAAAGAATAACATAGGTGACATGAATTGGTAC  150

seq1  CATTTGCTGGTCCTTTGATGTTCAAAATTAGTATTTTGAATTCATATTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTGGTCCTTTGATGTTCAAAATTAGTATTTTGAATTCATATTTC  200

seq1  CAACAAATGTCAAAATGCCCCTTCACTTCTATAAGTAAAACTGTGTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATGTCAAAATGCCCCTTCACTTCTATAAGTAAAACTGTGTTCAA  250

seq1  AGTTAAAGGCATATCTTACTATATTGTTCTTTTAAAAATTAGATTTGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGGCATATCTTACTATATTGTTCTTTTAAAAATTAGATTTGGAA  300

seq1  ATAATTATACAATGCTCTGGAGGTAGAAATTCCTGGGATGGCATAATACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATACAATGCTCTGGAGGTAGAAATTCCTGGGATGGCATAATACC  350

seq1  TTTGGAACTCTTTTAAAAATGTATTTCCTTAATATTTATGGAGGTGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACTCTTTTAAAAATGTATTTCCTTAATATTTATGGAGGTGATTA  400

seq1  TGCTGCACGTAATCCCAGCATAAATAGTGAGACTGGAAGAAGGGATGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCACGTAATCCCAGCATAAATAGTGAGACTGGAAGAAGGGATGCAG  450

seq1  TGACCCTCACCTACCTACTTCCTTGCAATAAACTTAATAAAGCATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCTCACCTACCTACTTCCTTGCAATAAACTTAATAAAGCATTTTTT  500

seq1  TGAGAAGGAGGAGCAAGAGTTAAAGAAAAGAGAAAAAGAAAATAATCGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGGAGGAGCAAGAGTTAAAGAAAAGAGAAAAAGAAAATAATCGAA  550

seq1  TAACTCTACTTAAAACTCTTTCAATGAATTAGATGTTTTGTTCTACTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTACTTAAAACTCTTTCAATGAATTAGATGTTTTGTTCTACTGTG  600

seq1  GATTTATACCCTTGGAGTCCTGGCATTCCTTTCTCAGATGACTGCTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATACCCTTGGAGTCCTGGCATTCCTTTCTCAGATGACTGCTTCCA  650

seq1  TCTGCTAACTTCTCCCCCTGCACCCTACATCCAGTTCTCCTCCAGCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTAACTTCTCCCCCTGCACCCTACATCCAGTTCTCCTCCAGCTATC  700

seq1  TACTTTAGAAGTTTCAGTATTTTTCTTCCTTAAGCTATTTCTTCAGACGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAGAAGTTTCAGTATTTTTCTTCCTTAAGCTATTTCTTCAGACGA  750

seq1  AGAGCTTGTGTAGCTCTCACTTAAATATTTCTCTTTATCAATTTTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTGTGTAGCTCTCACTTAAATATTTCTCTTTATCAATTTTCTCTT  800

seq1  TACACAGACATTTCTCAAACTGTCTGTGGCTCATTTCATGATAAAATGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGACATTTCTCAAACTGTCTGTGGCTCATTTCATGATAAAATGGC  850

seq1  GATATACCAGTTGCCTCAAGTGTTATTGCATGTGTTCAGTCACTTGGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACCAGTTGCCTCAAGTGTTATTGCATGTGTTCAGTCACTTGGATA  900

seq1  GGTTACACACAGCTGTTCTTGGAGGTACTTTGGCCTTAAAGGCTCTGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACACACAGCTGTTCTTGGAGGTACTTTGGCCTTAAAGGCTCTGAGA  950

seq1  CCAGAACT-GGCCTTTTGATTGACTAACGCAGTAAAATGTTCTAGTTCCT  999
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACTGGGCCTTTTGATTGACTAACGCAGTAAAATGTTCTAGTTCCT  1000

seq1  TCACACTTCCATATTAATTATATGTTTCATTTTAAATTTCTTCATTGTTA  1049
      |||||||| ||||||||||||||| |||||||| ||||||||||||||||
seq2  TCACACTT-CATATTAATTATATG-TTCATTTT-AATTTCTTCATTGTTA  1047

seq1  CAACA-CACTTAGGACAATCAGCAAGTGGCTTTTGCTC-ATTTG-CATCA  1096
      ||||| |||||||||||||||||||||||||||||||| ||||| |||| 
seq2  CAACACCACTTAGGACAATCAGCAAGTGGCTTTTGCTCAATTTGCCATC-  1096

seq1  ATTGTCATCCCATGCACCCCC-ATTCA-GATG-ATCAAACAACAAATGAA  1143
      |||||||| |||||||||||| ||||| |||| |||||||| ||||||||
seq2  ATTGTCAT-CCATGCACCCCCAATTCAGGATGAATCAAACACCAAATGAA  1145

seq1  AA--CCAAGTCTTGTCGAGGGAGGAATGATTTCTGAATTATTGTGACACA  1191
      ||  ||||||||||||  | |||     ||||||||||||||||||||||
seq2  AAATCCAAGTCTTGTCAGGAGAG----TATTTCTGAATTATTGTGACACA  1191

seq1  ATTG  1195
      ||||
seq2  ATTG  1195


seq1: chr12_67898214_67899346
seq2: B6Ng01-274C15.g_63_1196 (reverse)

seq1  GAACAACAGTATGAACTAATCAGTACCCCCCAGAACTC-GTGTCTCTAGC  49
      ||||||||| ||  |||| |||||||||||   ||||| |||||||||||
seq2  GAACAACAGAATTGACTATTCAGTACCCCCAGAAACTCGGTGTCTCTAGC  50

seq1  TGCATATGTA-GCAGAAGATGGCCTAGTTGGTCTTG-TAGCCAAGAGGCC  97
      |||||||||| ||||||||||||||||||||||||| ||||||||| |||
seq2  TGCATATGTAGGCAGAAGATGGCCTAGTTGGTCTTGTTAGCCAAGA-GCC  99

seq1  CTTTGGTCTAGCAAACTTTATATGCCCCAGTACAGGGGAAAGTCAGGACC  147
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTCTAGC-AACTTTATATGCCCCAGTACAGGGGAAAGTCAGGACC  148

seq1  AAGAAGTGCGAGTGAGTGGGGTAGGAGAGCAGGTTGGGGG-AGGGTATAG  196
       ||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  -AGAAGTGCGAGTGAGTGGGGTAGGAGAGCAGGTTGGGGGAAGGGTATAG  197

seq1  GGGACTTTTGGGATAGCATTTGAAATGTAAAAGAAGAAAATATCTAATAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTTTGGGATAGCATTTGAAATGTAAAAGAAGAAAATATCTAATAA  247

seq1  AAAATAAAAAGAAAAAGACATTTTGTGAAGCACTATCACTATCCTATAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAGAAAAAGACATTTTGTGAAGCACTATCACTATCCTATAAA  297

seq1  ATGTTCAGTCACAAAGGAACAAATGATATTTATATGTTTTCAGAAAACCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAGTCACAAAGGAACAAATGATATTTATATGTTTTCAGAAAACCA  347

seq1  TAGTTAAGCATGGAAGTAAATTAGTAGGCACAATAGTCAGCCAAAGTTTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAGCATGGAAGTAAATTAGTAGGCACAATAGTCAGCCAAAGTTTA  397

seq1  CTTACAGTACACATCCACTCGGATCGACTTTATTGCTGGTGACCCCAAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTACACATCCACTCGGATCGACTTTATTGCTGGTGACCCCAAGC  447

seq1  CATTCTCTGCTTTACAGTAATATCGGCCTCCTTGGTGTCTCTGAATGTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGCTTTACAGTAATATCGGCCTCCTTGGTGTCTCTGAATGTTT  497

seq1  GTAATCCTCAAAGTCTCATTGAAGACACTTGAGTCTTGGAATCTGTCAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCCTCAAAGTCTCATTGAAGACACTTGAGTCTTGGAATCTGTCAGA  547

seq1  GGCGCTTCCTGCTGTTTTGGTCCACCTGATCTGAGCAAGCACCAACAAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCTTCCTGCTGTTTTGGTCCACCTGATCTGAGCAAGCACCAACAAAG  597

seq1  ATTGTTACTTTAGGTTGGTTTTCCACAGACAATCAAGCAGCAGTTAGTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTACTTTAGGTTGGTTTTCCACAGACAATCAAGCAGCAGTTAGTCA  647

seq1  TCTGAAGAGATGCCCTGTAGAGCCACTGTGGCCCTTTTCCATCATGTTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAGATGCCCTGTAGAGCCACTGTGGCCCTTTTCCATCATGTTTG  697

seq1  TGGAGAATTAAAATATATGTACCAAATTGAATCCCAAAATTGCAAGCACC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAATTAAAATATATGTACCAAATTGAATCCCAAAATTGCAAGCACC  747

seq1  AATGTCTTCGCTTTAGAGTACACATCATTTGGATTCAGCTGCATGAAATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTTCGCTTTAGAGTACACATCATTTGGATTCAGCTGCATGAAATT  797

seq1  TGTCAATAGTCCAATCAGGTTGAAGGCAAAACATAGTAGAAACATGATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATAGTCCAATCAGGTTGAAGGCAAAACATAGTAGAAACATGATTC  847

seq1  AGTTTCTGTGTCTACTGCGCATCACAATTTTTCTCATACATTTCTGAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGTGTCTACTGCGCATCACAATTTTTCTCATACATTTCTGAACT  897

seq1  TTGGTAAGTACTTTTTATTATTTAGAAGAAATAGACTCTCATTTCATTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAGTACTTTTTATTATTTAGAAGAAATAGACTCTCATTTCATTTT  947

seq1  GGACAAGCTTCATTATTTTATTTAGAAATTTCTTGTTGGTTTAGATAATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGCTTCATTATTTTATTTAGAAATTTCTTGTTGGTTTAGATAATG  997

seq1  TAGGCATATTACCATAATGGCTTATTGAGATTATGTATAATTTTATACAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATATTACCATAATGGCTTATTGAGATTATGTATAATTTTATACAC  1047

seq1  CTGGTTTTTAAAAGAGTTTTTTTTTTTATTTAATGGCTTTGCTTTAATAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTTTAAAAGAGTTTTTTTTTTTATTTAATGGCTTTGCTTTAATAA  1097

seq1  GCCTACAAATGATTCGCTATTTTGAAAATTGGAATTC  1133
      |||||||||||||||||||||||||||||||||||||
seq2  GCCTACAAATGATTCGCTATTTTGAAAATTGGAATTC  1134


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