BAC Information

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BAC

Clone NameB6Ng01-274H17
Chromosome12 (Build37)
Map Location 95,846,055 - 95,847,198
singlet/doubletsinglet
Overlap genenone
Upstream gene2610022K04Rik-ps, EG633639
Downstream geneLOC217786, LOC100039603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274H17.bB6Ng01-274H17.g
ACCGA075772GA075773
length1,1311,165
definitionB6Ng01-274H17.b B6Ng01-274H17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggtgagccaggccaacataatataaaagcagagttttcaacc
caggctccagttcctgaataacaacttagaggcttatttatttttgaata
aatgttgttgtaacctaatttcattcttctaaatcctctagttgctactt
tcacctttataattgataatatcatgaatttaatgattgaatgaatggac
ggatggcttatcaaccaaatttgttaaatccataattaattaattaaagt
agaaaaaaactttttacaccaggaaaagtttttaaacctaatttatctca
ctcaagttggagcaatgaattcagtggtataaaacttgaattcaaattat
gccatgtccgctctcgaccagcaagtacgacatgaccaccagttcttcta
acagcagtttattcagcaaccttcagtctttatctctctcccctcatctt
tttctcccctgaaccccgggcctttcactcttatatactctcagcctcca
tccactcacggcaggccatgtcacctcaccaggcatgcagcttcagccaa
tcagggtggcaggggctcgtctccaccaaatatggacttgtttactccga
cagcatcatggtgcacctgtgcagctctcaagatggtcgtcgcttatttt
caggtgtatgaggaagtcaggtgcaagtcataagacttagctgcagtccc
gggcgccatcttgggactgctgccacacccactcctcacaaaattatatt
acatttttctttaaattttaaattataggtattaattttctcaaacaaat
acaggtccttcacctctatcacagacacactacttaaaaataatgatcaa
agccaagatgtaaaagtacatacatttttaatttgtggggaaatatttaa
ttcttggatatcataatgatgctctccactggatcctagggaaaagtttc
atgactttagactgcgagaaatttcctccagagggagaaaatgagtatga
aaaacaaagcatgagatgcacacacatttgacacacacacacaaaaaaac
ccacatgtgtatttctcagtattattttctatatcacttagagacgatgt
gaggtgggtggttggcatgtcatccctctac

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggactatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtgggatgctcacagtcagctaatggatggatcacaggctccc
aatagaggagctagaagaaagtacccaagagctaaagggatcttcaacct
ataggtgacacattatgactaccagtacccctgagctctgactctagctg
catatgtatcaaagattgctagtccgcaatcactgaaagagagtcatgaa
tcctgcagacttgggtgccagctacagaacgctaggtctatggggcatgg
tctggctaggacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95846055_95847198
seq2: B6Ng01-274H17.b_42_1172 (reverse)

seq1  GTAGAGGGATAGACATGCAAACACAAACCCACCTCACAAACCCTTCTCT-  49
      |||||||||| ||||||| |||    ||||||||||||    | ||||| 
seq2  GTAGAGGGAT-GACATGCCAAC---CACCCACCTCACA---TCGTCTCTA  43

seq1  AGTGATATAGAAAATAATAACTGAGAAATACACATGTGGGTTTTTTTTTG  99
      |||||||||||||||||| |||||||||||||||||||||  ||||||||
seq2  AGTGATATAGAAAATAAT-ACTGAGAAATACACATGTGGG--TTTTTTTG  90

seq1  TGTGTGTGTGTCAAATTGTGTTGTGCATCTCATGCTTTTGTTTTTCATAC  149
      ||||||||||||||| |||| |||||||||||||| ||||||||||||||
seq2  TGTGTGTGTGTCAAA-TGTG-TGTGCATCTCATGC-TTTGTTTTTCATAC  137

seq1  TCATTTTTCTCCCTCTGGAGGAAATTTCTCGCAGTCTAAAGTCATGAAAC  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCA-TTTTCTCCCTCTGGAGGAAATTTCTCGCAGTCTAAAGTCATGAAAC  186

seq1  TTTTCCCTAGGATCCAGTGGAGAGCATCATTATGATATCCAAGAATTAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTAGGATCCAGTGGAGAGCATCATTATGATATCCAAGAATTAAA  236

seq1  TATTTCCCCACAAATTAAAAATGTATGTACTTTTACATCTTGGCTTTGAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCCACAAATTAAAAATGTATGTACTTTTACATCTTGGCTTTGAT  286

seq1  CATTATTTTTAAGTAGTGTGTCTGTGATAGAGGTGAAGGACCTGTATTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTTTAAGTAGTGTGTCTGTGATAGAGGTGAAGGACCTGTATTTG  336

seq1  TTTGAGAAAATTAATACCTATAATTTAAAATTTAAAGAAAAATGTAATAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAAATTAATACCTATAATTTAAAATTTAAAGAAAAATGTAATAT  386

seq1  AATTTTGTGAGGAGTGGGTGTGGCAGCAGTCCCAAGATGGCGCCCGGGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTGAGGAGTGGGTGTGGCAGCAGTCCCAAGATGGCGCCCGGGAC  436

seq1  TGCAGCTAAGTCTTATGACTTGCACCTGACTTCCTCATACACCTGAAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTAAGTCTTATGACTTGCACCTGACTTCCTCATACACCTGAAAAT  486

seq1  AAGCGACGACCATCTTGAGAGCTGCACAGGTGCACCATGATGCTGTCGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGACGACCATCTTGAGAGCTGCACAGGTGCACCATGATGCTGTCGGA  536

seq1  GTAAACAAGTCCATATTTGGTGGAGACGAGCCCCTGCCACCCTGATTGGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACAAGTCCATATTTGGTGGAGACGAGCCCCTGCCACCCTGATTGGC  586

seq1  TGAAGCTGCATGCCTGGTGAGGTGACATGGCCTGCCGTGAGTGGATGGAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTGCATGCCTGGTGAGGTGACATGGCCTGCCGTGAGTGGATGGAG  636

seq1  GCTGAGAGTATATAAGAGTGAAAGGCCCGGGGTTCAGGGGAGAAAAAGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGTATATAAGAGTGAAAGGCCCGGGGTTCAGGGGAGAAAAAGAT  686

seq1  GAGGGGAGAGAGATAAAGACTGAAGGTTGCTGAATAAACTGCTGTTAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGAGAGATAAAGACTGAAGGTTGCTGAATAAACTGCTGTTAGAA  736

seq1  GAACTGGTGGTCATGTCGTACTTGCTGGTCGAGAGCGGACATGGCATAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGTGGTCATGTCGTACTTGCTGGTCGAGAGCGGACATGGCATAAT  786

seq1  TTGAATTCAAGTTTTATACCACTGAATTCATTGCTCCAACTTGAGTGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATTCAAGTTTTATACCACTGAATTCATTGCTCCAACTTGAGTGAGA  836

seq1  TAAATTAGGTTTAAAAACTTTTCCTGGTGTAAAAAGTTTTTTTCTACTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAGGTTTAAAAACTTTTCCTGGTGTAAAAAGTTTTTTTCTACTTT  886

seq1  AATTAATTAATTATGGATTTAACAAATTTGGTTGATAAGCCATCCGTCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTAATTATGGATTTAACAAATTTGGTTGATAAGCCATCCGTCCA  936

seq1  TTCATTCAATCATTAAATTCATGATATTATCAATTATAAAGGTGAAAGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAATCATTAAATTCATGATATTATCAATTATAAAGGTGAAAGTA  986

seq1  GCAACTAGAGGATTTAGAAGAATGAAATTAGGTTACAACAACATTTATTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAGAGGATTTAGAAGAATGAAATTAGGTTACAACAACATTTATTC  1036

seq1  AAAAATAAATAAGCCTCTAAGTTGTTATTCAGGAACTGGAGCCTGGGTTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAAGCCTCTAAGTTGTTATTCAGGAACTGGAGCCTGGGTTG  1086

seq1  AAAACTCTGCTTTTATATTATGTTGGCCTGGCTCACCTGGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTGCTTTTATATTATGTTGGCCTGGCTCACCTGGAATTC  1131


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