BAC Information

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BAC

Clone NameB6Ng01-280M18
Chromosome12 (Build37)
Map Location 116,789,683 - 116,789,871
singlet/doubletsinglet
Overlap geneIgh
Upstream geneIghv1-8, Ighv15-2, Ighv1-9, Ighv1-10, Ighv1-11, EG629860, Ighv1-13, Ighv1-14, Ighv1-15, EG629866, Ighv1-17-1, Ighv1-17, Ighv1-18, EG668493, Ighv1-19, EG668497, Ighv1-21-1, Ighv1-21, Ighv1-22, Ighv1-23, Ighv1-24, Ighv1-25, Ighv1-26, Ighv1-27, Ighv1-28, Ighv1-29, Ighv1-30, Ighv1-31, Ighv1-32, Ighv1-33, Ighv1-34, EG668515, Ighv1-36, Ighv1-37, Ighv1-38, Ighv1-39, Ighv1-40, Ighv1-41, EG629906, EG629908, Ighv1-44, Ighv1-45, Ighv1-46, Ighv1-47, Ighv8-3, EG629919, Ighv1-48, Ighv1-49, EG640506, Ighv1-50, Ighv1-51, Ighv1-52, Ighv1-53, EG629930, EG668534, EG211331, Ighv1-55, EG634662, Ighv1-56, EG629936, Ighv8-7, Ighv1-57, Ighv8-8, Ighv1-58, EG432708, Ighv1-60, Ighv1-61, Ighv1-62, EG668544, EG238448, EG668549, EG432709, EG668552, Ighv1-63, Ighv1-64, Ighv8-10, Ighv1-65, EG668554
Downstream geneEG636462, LOC217924, Ighv1-66, EG435328, Ighv1-68, LOC435329, EG668563, Ighv1-69, Ighv8-12, LOC619863, EG638634, EG619886, Ighv1-72, EG668575, EG668577, EG668582, Ighv1-75, Ighv1-77, Ighv1-78, GA_x5J8B7W27DS-1519-2216, Ighv1-79, LOC668586, Ighv1-80, Ighv1-81, Olfr241-ps1, Ighv1-83, EG434609, LOC668595, EG668597, EG668599, Zfp386, Vipr2, LOC676058, Wdr60, LOC100042963, D12Ertd551e, D430020J02Rik, Ncapg2, Rnu7-ps1, Ptprn2, LOC627375
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280M18.bB6Ng01-280M18.g
ACCGA080435GA080436
length1,197189
definitionB6Ng01-280M18.b B6Ng01-280M18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttttcagttctgagctccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttgggtattagcccc
ctatctgatttaggataggtaaaaatcctttcccaatttgttggtggtct
ttttgtcttattgacggtgtcttttcccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacatgccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccacttagatttgaccttagtacaaggagataaatatggatcgattcac
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctatagtaaagctttaggtcagtcatggtgattccaccagaggttcttt
tatccttgagaagaatttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcattgaagaattgatttggaatttt
gatggggattgcattgaatatgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggaggtctttccatctt
ctgagatcttctttaaatttctttcttcagagatttgaagtttttatcat
acagatctttcacctccttagttagagttaagccaagaatattttatact
atttgtgactattgagaaaggtgttgtttccctattttctttctcagcct
gttttatttctttggtatagagaaagccattgacttgttgagtttatttt
tatatcagctacttcaccgaagctgcttatcagtttaggagtctctggag
aattttaggtcctatatatactactatatcaatcctgccaaggaattcga
cttctctttccatttgtatctccttgaactcttctgttgtgttgtga
tgagaagcaggaaggaaccaaactatatccaggatatatattgcatgaca
aaagaatctcttttcaataaaagagagaaaacaatttaaaaatgaaagtg
aagaagaggatgaagaagaggaagaagagaaaggtgaaggaggaggaaga
agaagaagaagaggaggaggaggaggaaggggaagaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_116789683_116789871
seq2: B6Ng01-280M18.g_73_261

seq1  TGAGAAGCAGGAAGGAACCAAACTATATCCAGGATATATATTGCATGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGCAGGAAGGAACCAAACTATATCCAGGATATATATTGCATGACA  50

seq1  AAAGAATCTCTTTTCAATAAAAGAGAGAAAACAATTTAAAAATGAAAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATCTCTTTTCAATAAAAGAGAGAAAACAATTTAAAAATGAAAGTG  100

seq1  AAGAAGAGGATGAAGAAGAGGAAGAAGAGAAAGGTGAAGGAGGAGGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGATGAAGAAGAGGAAGAAGAGAAAGGTGAAGGAGGAGGAAGA  150

seq1  AGAAGAAGAAGAGGAGGAGGAGGAGGAAGGGGAAGAAGG  189
      |||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGAAGAGGAGGAGGAGGAGGAAGGGGAAGAAGG  189