BAC Information

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BAC

Clone NameB6Ng01-281L04
Chromosome12 (Build37)
Map Location 31,374,267 - 31,375,173
singlet/doubletsinglet
Overlap genenone
Upstream geneMyt1l, Pxdn, Tpo, Sntg2, Tmem18
Downstream geneLOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1, Dld, LOC668786, Slc26a3, Cbll1, Slc26a4, LOC100043531, Bcap29, Dus4l, LOC100043081
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281L04.bB6Ng01-281L04.g
ACCGA081109GA081110
length1,011908
definitionB6Ng01-281L04.b B6Ng01-281L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttttatggtgttatttgatt
ttctgaagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggattggtaaatatcctttcctaatctgttggtggcct
ttttgtctaattgatggtgtcttttgccttacagaagctttgcaatttta
tgaggtcccatttgtctattctcaatcttacagcacaagccattgctgtt
ctattcaggaatttttgccctgtacccatatcttcgaggcttttctctac
tttctcctctataggtttcagtgtctttggttttatgtggagttccttaa
tcaacttagatttgaccttagtacaaggagataggaatggatcaattcgc
attcttctacatgataaccgccagttgtgccagcacaatttgttgaaaat
ggtgtcttttttcaactggatggtggttcctggactccaccgagactagt
ctgcacaggtgagagtgtggactacagaagctaacaacttctgggacagg
caggagccactgagcttctgatgcagccccctttttgggctccagacatc
cgggcacttttcctgccagagaataggtgtccacccagctggggagggaa
ttgccagaacatctgcaggagacatcttggttcctggactccaccgagac
tagtctgcacaggtgagagtgtggactacagaagctaacagcttctggga
caggtcctgtttcgggcctttatcttctgccaggaggcaagtctgaatgc
cagatatctgtgcaccttccctgaaagaggagagcctgcctgcagagagt
gctctgaccactgaaactcaggagagagctagtctcccaggtctgctggt
agagaataacagaatcacgagaggaacaagctctaactagatgttaattc
taaatatcatgtcaggactaaacttattgatagagtgacatgtacttcat
tcacaattccc
gaattccctaagttcttgtatatttaaaacttgaagagaaactctgggag
aactaattgttctccttggaatatctttcctcgagtttctatgacacctt
gagttatgtcacacaccaatcttgccttactaattccattgccttgtaaa
tcatcattggtatgtcactagtggctttgacaatcctctttcccctctcc
ctccccttttccttccccctcccctccctttccctttctctgttttttaa
attctgtgtcatgctcttgaccatactggttaaaatatatagattaatgg
tgttgattggcttggaagccttcttagatcatggttctaaagatttttcc
tagttcactcatggactccaattcaactattttctccacagccagctcta
cttttccattgaatattttttcaccatattgaccattttcctaactatat
tcaatatgactgtgaccatttcaattaaatccgttttctatagttctcct
ttaatttattctttttgtatggaatactttctttcatttcttttctgaat
tcaacatactctatttttttaattttttttcatgttagtgcaaatataaa
gtgctgttagtgtccagaacttttctgtgtctcaaataattattgagaat
agttacctaattttgaaataataagttacattttattctacctcatgttt
ctttggaggggacaaaggaacacttagtattggtttctgctattgatctt
aatgtagtgcttttatcataattaatatatcctcattaatttgggggggc
ttggtagcttgctaaattcctagctcaacagcaccctcttctgcccatgt
gctgtgtccctcctacgtttctgatgtgagtggaaggtggagtgtactgg
tgtgtttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_31374267_31375173
seq2: B6Ng01-281L04.g_66_973

seq1  GAATTCCCTAAGTTCTTGTATATTTAAAACTTGAAGAGAAACTCTGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAAGTTCTTGTATATTTAAAACTTGAAGAGAAACTCTGGGAG  50

seq1  AACTAATTGTTCTCCTTGGAATATCTTTCCTCGAGTTTCTATGACACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTGTTCTCCTTGGAATATCTTTCCTCGAGTTTCTATGACACCTT  100

seq1  GAGTTATGTCACACACCAATCTTGCCTTACTAATTCCATTGCCTTGTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTATGTCACACACCAATCTTGCCTTACTAATTCCATTGCCTTGTAAA  150

seq1  TCATCATTGGTATGTCACTAGTGGCTTTGACAATCCTCTTTCCCCTCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATTGGTATGTCACTAGTGGCTTTGACAATCCTCTTTCCCCTCTCC  200

seq1  CTCCCCTTTTCCTTCCCCCTCCCCTCCCTTTCCCTTTCTCTGTTTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTTTTCCTTCCCCCTCCCCTCCCTTTCCCTTTCTCTGTTTTTTAA  250

seq1  ATTCTGTGTCATGCTCTTGACCATACTGGTTAAAATATATAGATTAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGTCATGCTCTTGACCATACTGGTTAAAATATATAGATTAATGG  300

seq1  TGTTGATTGGCTTGGAAGCCTTCTTAGATCATGGTTCTAAAGATTTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATTGGCTTGGAAGCCTTCTTAGATCATGGTTCTAAAGATTTTTCC  350

seq1  TAGTTCACTCATGGACTCCAATTCAACTATTTTCTCCACAGCCAGCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCACTCATGGACTCCAATTCAACTATTTTCTCCACAGCCAGCTCTA  400

seq1  CTTTTCCATTGAATATTTTTTCACCATATTGACCATTTTCCTAACTATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCATTGAATATTTTTTCACCATATTGACCATTTTCCTAACTATAT  450

seq1  TCAATATGACTGTGACCATTTCAATTAAATCCGTTTTCTATAGTTCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGACTGTGACCATTTCAATTAAATCCGTTTTCTATAGTTCTCCT  500

seq1  TTAATTTATTCTTTTTGTATGGAATACTTTCTTTCATTTCTTTTCTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTATTCTTTTTGTATGGAATACTTTCTTTCATTTCTTTTCTGAAT  550

seq1  TCAACATACTCTATTTTTTTAATTTTTTTTCATGTTAGTGCAAATATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATACTCTATTTTTTTAATTTTTTTTCATGTTAGTGCAAATATAAA  600

seq1  GTGCTGTTAGTGTCCAGAACTTTTCTGTGTCTCAAATAATTATTGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTTAGTGTCCAGAACTTTTCTGTGTCTCAAATAATTATTGAGAAT  650

seq1  AGTTACCTAATTTTGAAATAATAAGTTACATTTTATTCTACCTCATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTAATTTTGAAATAATAAGTTACATTTTATTCTACCTCATGTTT  700

seq1  CTTTGGAGGGGACAAAGGAACACTTAGTATTGGTTTCTGCTATTGATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAGGGGACAAAGGAACACTTAGTATTGGTTTCTGCTATTGATCTT  750

seq1  AATGTAGTGCTTTTATCATAATTAATATATCCTCATTAATTTGGGGGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGTGCTTTTATCATAATTAATATATCCTCATTAATTTGGGGGGGC  800

seq1  TTGGTAGCTTGCTAAATTCCTAGCTCAACAGCACCCTCTTCTGCCCATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAGCTTGCTAAATTCCTAGCTCAACAGCACCCTCTTCTGCCCATGT  850

seq1  GCTGTGTCCCTCCTACGTTTCTGATGTGAGTGG-AGGTGGAGTGTACTGG  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCTGTGTCCCTCCTACGTTTCTGATGTGAGTGGAAGGTGGAGTGTACTGG  900

seq1  TGTGTTGG  907
      |||||| |
seq2  TGTGTTTG  908