BAC Information

Click to search

BAC

Clone NameB6Ng01-282F21
Chromosome12 (Build37)
Map Location 30,971,992 - 30,973,099
singlet/doubletsinglet
Overlap geneSntg2
Upstream geneLOC629608, Myt1l, LOC100043496, Pxdn, Tpo
Downstream geneTmem18, LOC100043055, Acp1, Sh3yl1, LOC629656, 9030611O19Rik, LOC668781, LOC100043065, LOC100043514, EG629667, LOC100043068, Lamb1-1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282F21.bB6Ng01-282F21.g
ACCGA081606GA081607
length1,1241,149
definitionB6Ng01-282F21.b B6Ng01-282F21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctctgggcaagcagggaggggctttgctttccctaggaatag
tgttgacttactgaacaggcaccgacgagtggaagaatgaatgggagcat
gcccgttagggaatgctaactaattaatagcctatttgactttgactgtt
acacagaacgagacctgaaagggaccctttcgggtctcttctagtcttaa
gcctatcttttggtttggattctctgcttctcctccttgttttggcttcc
catctcatggcagctctgccactgtgtatgttgtgccagcaccccactcc
cctcctcctccatcttgtttcttgagacacagctttaatgaaatcttcat
gtttgcccctcctttcataggcaactaggccccttcttactcaggctcca
tggccccaggttctttgaatgactgcactataggggtctcagtctgtctg
tctgtctgtctgtctgtctctctctctctgcccaaacactagctttcaag
aggaggtgtttctcttatcctttgccctttgaagcccaacatgacccaag
tccattttcttggggtgaattgcttatgaatacctttgacccacatcatc
ttaggcacccactaaatgagcctatcacatgacccttccacattatacat
ttcatacactaagatgctggagtgagctggtgtgtcagaaacagaacacc
gtacagtggggctctgcatggtactagacaaaccttcagtaaatgctggg
agactttgagttttgtcctgaggtaaccctctaaggcaaagcagcaagtc
aaatgctccatgaatttctgtgcccttgaatttaaaatgggcgaaatcag
atgtatttccttcaagtgcttgtggagacctgcaggtccctggtgtgtct
gtgtctatgaacacactcacataaaatatgggttaatagagaaatacatt
tagaggaaaataacataccaaaaaatagcccccctccaatataagaactt
accactttctttcatgggttgcgtttttctaacattaaatgcccattaaa
cttgaacagatgacaaatggagaaattttgagggaataataggttgattg
gaataaaacttaaaaatttaaaga
gaattcacccctgagtttgataattttctgccatctacttctcttgggtg
aatttgcttccttttgttctagagcatctaggtgtgttgtaaaggtgcta
gtgtgtgctctctctactttctttttggaggcactcagaactatgagttt
ccctcttagaaatgctttcattgtgtcccataagtttcggtatgttgtga
cttaattttcattaaactctaaaaaatctttaatttctttctttatacct
tccttgaccaaggtatcaatgagaagagtattgttcagtttccacgtgaa
tgttggctttctattatttatgttgttattgaagatcagccttagtccat
gatgatctgataggatgcatgggacaatttcattattcttgtatctgttg
aggactgttttttgaccaattatatggtgagttttggagaaggtaccatg
aggtgctgagaagaaggtatatccttttgttttaggataaaatgttctgt
agatatctgttaagtccatttgtttcataacttctgttagtttcactgtg
tccctgtttagtttctgtttccacgatctgtccattgatgaaagtggtgt
gttgaagtctcccactatcattgtgtgagatgcaatgtgtgctttgagct
ttactaaagtttctttaatgaatatggctgcccttgtatttggggcatag
atattcagaattgagagttcctcttagaagactttacctttgatgagtat
gaagtgtccctccttgtcttttttgataactttggggttgaagtcgattt
tattagatattagaatggctacttccagcttttttcttcagaccatttgc
ttgggaaatttgttttccagccctttcattctgaggtagtgtctgtcttt
ttccctgagatatgtttcctgtaagcagcaaaatgttcggtccttgtttt
gtgtagccagtctttttagtctatgtcttttttattgggcagttgaggtc
cattgatataagagattttaagggaatgctaattgttggctttctattat
ttttgtgttagaagttggcattcctgttctggtgctgtcttctttagttt
tgatgagaatacgttctgctttatgtcgaggagtagggtactatgtcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_30971992_30973099
seq2: B6Ng01-282F21.b_45_1168

seq1  GAATTCAGCTCTGGGCAAGCAGGGAGGGGCTTTGCTTTCCCTAGGAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCTGGGCAAGCAGGGAGGGGCTTTGCTTTCCCTAGGAATAG  50

seq1  TGTTGACTTACTGAACAGGCACCGACGAGTGGAAGAATGAATGGGAGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACTTACTGAACAGGCACCGACGAGTGGAAGAATGAATGGGAGCAT  100

seq1  GCCCGTTAGGGAATGCTAACTAATTAATAGCCTATTTGACTTTGACTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGTTAGGGAATGCTAACTAATTAATAGCCTATTTGACTTTGACTGTT  150

seq1  ACACAGAACGAGACCTGAAAGGGACCCTTTCGGGTCTCTTCTAGTCTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAACGAGACCTGAAAGGGACCCTTTCGGGTCTCTTCTAGTCTTAA  200

seq1  GCCTATCTTTTGGTTTGGATTCTCTGCTTCTCCTCCTTGTTTTGGCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATCTTTTGGTTTGGATTCTCTGCTTCTCCTCCTTGTTTTGGCTTCC  250

seq1  CATCTCATGGCAGCTCTGCCACTGTGTATGTTGTGCCAGCACCCCACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATGGCAGCTCTGCCACTGTGTATGTTGTGCCAGCACCCCACTCC  300

seq1  CCTCCTCCTCCATCTTGTTTCTTGAGACACAGCTTTAATGAAATCTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCTCCATCTTGTTTCTTGAGACACAGCTTTAATGAAATCTTCAT  350

seq1  GTTTGCCCCTCCTTTCATAGGCAACTAGGCCCCTTCTTACTCAGGCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCCCTCCTTTCATAGGCAACTAGGCCCCTTCTTACTCAGGCTCCA  400

seq1  TGGCCCCAGGTTCTTTGAATGACTGCACTATAGGGGTCTCAGTCTGTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCAGGTTCTTTGAATGACTGCACTATAGGGGTCTCAGTCTGTCTG  450

seq1  TCTGTCTGTCTGTCTGTCTCTCTCTCTCTGCCCAAACACTAGCTTTCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTGTCTGTCTCTCTCTCTCTGCCCAAACACTAGCTTTCAAG  500

seq1  AGGAGGTGTTTCTCTTATCCTTTGCCCTTTGAAGCCCAACATGACCCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGTGTTTCTCTTATCCTTTGCCCTTTGAAGCCCAACATGACCCAAG  550

seq1  TCCATTTTCTTGGGGTGAATTGCTTATGAATACCTTTGACCCACATCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTCTTGGGGTGAATTGCTTATGAATACCTTTGACCCACATCATC  600

seq1  TTAGGCACCCACTAAATGAGCCTATCACATGACCCTTCCACATTATACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCACCCACTAAATGAGCCTATCACATGACCCTTCCACATTATACAT  650

seq1  TTCATACACTAAGATGCTGGAGTGAGCTGGTGTGTCAGAAACAGAACACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACACTAAGATGCTGGAGTGAGCTGGTGTGTCAGAAACAGAACACC  700

seq1  GTACAGTGGGGCTCTGCATGGTACTAGACAAACCTTCAGTAAATGCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTGGGGCTCTGCATGGTACTAGACAAACCTTCAGTAAATGCTGGG  750

seq1  AGACTTTGAGTTTTGTCCTGAGGTAACCCTCTAAGGCAAAGCAGCAAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTGAGTTTTGTCCTGAGGTAACCCTCTAAGGCAAAGCAGCAAGTC  800

seq1  AAATGCTCCATGAATTTCTGTGCCCTTGAATTTAAAATGGGCGAAATCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCCATGAATTTCTGTGCCCTTGAATTTAAAATGGGCGAAATCAG  850

seq1  ATGTATTTCCTTC-AGTGCTTGTGGAGACCTGCAGGTCCCTGGTGTGTCT  899
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTCCTTCAAGTGCTTGTGGAGACCTGCAGGTCCCTGGTGTGTCT  900

seq1  GTGTCTATGAACACACTCACAT-AAATATGGGTTAATAGAGAAATACATT  948
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTGTCTATGAACACACTCACATAAAATATGGGTTAATAGAGAAATACATT  950

seq1  TAGAAGAAAATAACATACC-AAAAATAGCCCCCCTCCAAATATAAG-ACT  996
      |||| |||||||||||||| ||||||||||||||||| |||||||| |||
seq2  TAGAGGAAAATAACATACCAAAAAATAGCCCCCCTCC-AATATAAGAACT  999

seq1  TACCACTT--CTTCATGGGTTGCG-TTTTCT-ACATT-AATG-CCATT-A  1039
      ||||||||   ||||||||||||| |||||| ||||| |||| ||||| |
seq2  TACCACTTTCTTTCATGGGTTGCGTTTTTCTAACATTAAATGCCCATTAA  1049

seq1  ACCTGAACAGATGACAAATGAAG-AATTTTGAGG--ATAATA-GTTGATT  1085
      || ||||||||||||||||| || ||||||||||  |||||| |||||||
seq2  ACTTGAACAGATGACAAATGGAGAAATTTTGAGGGAATAATAGGTTGATT  1099

seq1  GGAAT-AAACTT-AAAATTTAAAGA  1108
      ||||| |||||| ||||||||||||
seq2  GGAATAAAACTTAAAAATTTAAAGA  1124