BAC Information

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BAC

Clone NameB6Ng01-283N24
Chromosome12 (Build37)
Map Location 58,293,646 - 58,294,360
singlet/doubletsinglet
Overlap geneSlc25a21
Upstream geneLOC382601, Mbip, EG621837, E030019B13Rik, Titf1, LOC100039993, Nkx2-9, Pax9
Downstream geneAU021838, LOC100040044, Foxa1, 4921506M07Rik, EG217600, BC042761
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283N24.bB6Ng01-283N24.g
ACCGA082723GA082724
length7181,160
definitionB6Ng01-283N24.b B6Ng01-283N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggccagcctggtctatataatgagactctaaaaaggaaaaaa
aaaatgaataaaaagaaaaaaagtcctcccatagacaaacgaaaagcaat
aaacaaagaagaaatatatagtggcatctagaaatttgtttaaaatgttg
gacttcaggcttccaagtatgactgactgtactgaatctacattctaggt
aggcttcaggttattggcttgtatttttattttaaaagtactgtgttaga
tctttgagcaaaagcactccccagagtgagagggcacaattcatatggca
gaggattgcaagtaaaatgtttttggctttcactgtggatgagagtgggc
atggaggtgggaagagaatggattgtgtagcctctatgatgtacccttgt
gttggcttccaggaataccgtccaacctttatatttcatttgattctgtt
aaataagctgtctgcacttttatttccaatgcctggcatgtgtgcctctt
gcttttccctctctctgttgaaatattgaccatttccctggcttgagaat
accctctccccaatattttgcaagtgatttcctctttaggttcttccagc
tttaacattctcattaacatgcaaatatgcaaatgttaaaactagcttaa
tgtctattgaaatgctaaatgccagtcagccctgtgctaaagcctattga
atgtaaagtgccattcag
gaattctaagtcttcaaactattccacaaaataaaaccagaagaaacaca
acctaatccattctatgaagccacatttaccctgaactatacaccacaca
aagacccaacaaagaagagaacttcagatcaattttgcttatgaatatcc
atggaaatataagtaaaattcttacaaacccaatgcaagaacacatcatt
caccatgatcaagtaggcttcatcccagggatgcagggatggttcaatat
aggaaaatccacaatgtaacccactaaataatcaatctcaaagaaaaaaa
ttacatgatcatctcattagatgctgaaaggcctttggcaaaaacaaaca
tctcttcatgttaaaagtcttggaaagattggggattcaaggcacatacc
taaatataataaaagcaatatgcagcaagacaataatagtcaacagaaaa
ttaaatggagaaaaacttgaaggaattccaataaaattatgttcaagaca
aggctaccgagtaactatttaatatactacttgaagctctagctagagca
ataaaacaacaaaggggatcaatgcataacttttcgaaaatgatatgata
agtgatgccgaaaattctggcacacaactcctacagctgataaacaacct
cagcaaagtgactggatataataacaaagtgactggatataataataata
atataataagaaattagtatttctcccttatacaaggttagataggctga
aaaagaaagtagggaaacaacacccttcacaacagtcacaaataatatag
aatacctttgtgtaactctaagcaagcaagtgaaagacctgtatgacaag
aacttcaagtccctgaagaaatccaagaagatctcagatgtggaaagatc
tctcatgctcatgggatcagacggattaacatagtaaaatgtcggtccta
ccaactaacttcttgagaaatcatcattcttgacctcaagcggtactaca
gagcattgtgatcaaaaactgcatgtactgatatagaaacagcagatagc
atgatcgatcaagaccagaagtatcccccacatactagagattttacaag
aagccaaacattcacgaaaataaagcatcatcacaatgtgctggccttaa
ctggcggtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_58293646_58294360
seq2: B6Ng01-283N24.b_48_765 (reverse)

seq1  CTGATTGGCACTTAACATTCAATAGGCCTTAGCACAGGGCTGACTGGCAT  50
      |||| |||||||| ||||||||||||| ||||||||||||||||||||||
seq2  CTGAATGGCACTTTACATTCAATAGGCTTTAGCACAGGGCTGACTGGCAT  50

seq1  TTAGCA-TTCAATAGACATT-AGCTAG-TTTAACATTTGCATATTTGCAT  97
      |||||| ||||||||||||| |||||| ||||||||||||||||||||||
seq2  TTAGCATTTCAATAGACATTAAGCTAGTTTTAACATTTGCATATTTGCAT  100

seq1  GTTAATGAGAATGTTAAAGCTGGAAGAACCTAAAGAGGAAATCACTTGCA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGAGAATGTTAAAGCTGGAAGAACCTAAAGAGGAAATCACTTGCA  150

seq1  AAATATTGGGGAGAGGGTATTCTCAAGCCAGGGAAATGGTCAATATTTCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTGGGGAGAGGGTATTCTCAAGCCAGGGAAATGGTCAATATTTCA  200

seq1  ACAGAGAGAGGGAAAAGCAAGAGGCACACATGCCAGGCATTGGAAATAAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGGGAAAAGCAAGAGGCACACATGCCAGGCATTGGAAATAAA  250

seq1  AGTGCAGACAGCTTATTTAACAGAATCAAATGAAATATAAAGGTTGGACG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGACAGCTTATTTAACAGAATCAAATGAAATATAAAGGTTGGACG  300

seq1  GTATTCCTGGAAGCCAACACAAGGGTACATCATAGAGGCTACACAATCCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCCTGGAAGCCAACACAAGGGTACATCATAGAGGCTACACAATCCA  350

seq1  TTCTCTTCCCACCTCCATGCCCACTCTCATCCACAGTGAAAGCCAAAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCCCACCTCCATGCCCACTCTCATCCACAGTGAAAGCCAAAAAC  400

seq1  ATTTTACTTGCAATCCTCTGCCATATGAATTGTGCCCTCTCACTCTGGGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTTGCAATCCTCTGCCATATGAATTGTGCCCTCTCACTCTGGGG  450

seq1  AGTGCTTTTGCTCAAAGATCTAACACAGTACTTTTAAAATAAAAATACAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTTTGCTCAAAGATCTAACACAGTACTTTTAAAATAAAAATACAA  500

seq1  GCCAATAACCTGAAGCCTACCTAGAATGTAGATTCAGTACAGTCAGTCAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATAACCTGAAGCCTACCTAGAATGTAGATTCAGTACAGTCAGTCAT  550

seq1  ACTTGGAAGCCTGAAGTCCAACATTTTAAACAAATTTCTAGATGCCACTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGAAGCCTGAAGTCCAACATTTTAAACAAATTTCTAGATGCCACTA  600

seq1  TATATTTCTTCTTTGTTTATTGCTTTTCGTTTGTCTATGGGAGGACTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCTTCTTTGTTTATTGCTTTTCGTTTGTCTATGGGAGGACTTTT  650

seq1  TTTCTTTTTATTCATTTTTTTTTTCCTTTTTAGAGTCTCATTATATAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTATTCATTTTTTTTTTCCTTTTTAGAGTCTCATTATATAGAC  700

seq1  CAGGCTGGCCTGGAATTC  715
      ||||||||||||||||||
seq2  CAGGCTGGCCTGGAATTC  718