BAC Information

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BAC

Clone NameB6Ng01-284A18
Chromosome12 (Build37)
Map Location 68,072,516 - 68,143,818
singlet/doubletdoublet
Overlap geneMdga2
Upstream geneLOC100040700, EG238217
Downstream geneLOC100040745
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284A18.bB6Ng01-284A18.g
ACCGA082847GA082848
length1,1181,173
definitionB6Ng01-284A18.b B6Ng01-284A18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,072,516 - 68,073,640)(68,142,647 - 68,143,818)
sequence
gaattccttgttttttcatgaccataagttttatgctatttcctgtatct
taccttactccatttgaagtttatgatgaagtgtcaagcagactgccctc
tctatcctcttccatttgtacatttatacgtggctgggcaacatcacatc
attcactatattttcttcaataagatttaggtgttatatagccagcaaca
gcaatgagtaaaccaatgacaggtaatagcactaaaatacaaagctcttg
acatgtcatatgatcactctctagatgaactatattattcagagatattt
ctttgcctaactagcagtaaactactaataggaacatgaaaaacaagtaa
acgcatgtcccaatacaaatataaaatcacttcacatttttgttttctgt
gtagtttgtcattaatgctaatatccactgatttgcaaatgcaattgggg
gaataaaaattacaatgagagattagcatgaaactacattataattaaag
cagatattgaaagtatatagtgacttaaaatgcatggctgtggtatggga
tttcagtggaggaaaggagcttctgggaaggcctaattatgactgccatc
atcatccatacacataaagtatttacaaaactgttcagagttctatcaac
aaattgcttcatcaaatgatcatgtcaacatatcaacattaaaggattaa
atgatactaaaccataagtttagagctcatgtttatatatcatgaatata
tatatatatatatatattcatgtttatatttagaactcatgataaataca
tcatgatcatatttagcattcatgctgcatgaaagcaaatgaacctgcaa
tgcctacagctgttcttaagctcagactacattctcacacagatcagttt
tctcagtaatatgagatctgatatctggagtcatggagttttttgcatgt
ctatctaataagggctagaagaaatacaggagaattgtgttgtttcttgt
atatctagcaattagattttgtttgctcatttgttaactcggcacattac
attgcaacactctagcagacagatgctgataaacactttctcataccttg
gggagaaggaaaacatga

gaattccatatctccatctctacatatcactaggactgtgaaaatgtaca
gtaccagtaaatcatcaaaatttgtttattgttaaaaatataagtacccc
agaagctgtgcagtttagataattttccataaagtgtgattcatctattg
aaatttttaaaaaattgtattgttttttaacctgtgaaaagataatcctg
atatgatgttttattataatatttcaaagcaaaacttaaactattactct
gtctttggagggacttttttttggtgacttttttttattaggtattttcc
ttggagggacttttttaagtggagaaaaaaaaagaaagaaacatagtctc
tcatgtgtgcttaacttgcctgatgaatgaagcataggagaatttgttga
ctagggaattattacatgactctgagagagtgtgattgcttttagttgta
gacaaatgttgggtcaagacacagagaaaaattatactgtggtttagaat
cttagtttctgtcagaacttgctcatctttcctattaatatattggacaa
aaagtcttgcatctacattttgcattttagagagactatatcatttacaa
ctttcatttcctgtaaatgagtgtgtcttgttcagattgtcaagcaaaac
tttgatagtcaacccagatgctgatttaaaagtttctacattgaatatga
tttattttcaaccctggaaatagtataagttctttgccaagtcagacttc
ctcccacgcgtattgctgtatgtggaagaaatggagtaaatcagaagtaa
gagaaaggcagagactttcctcagcaccacacaaacttaagcacggaact
gaaccctgtggttcagttcagtgccctggtgactatctgagcatctttta
gggctattagttctcattagtaaggagttctgtgtaaagatatctcatgt
ttcgcagcttcccctgacttcttcatttccattctcataagatgtgagat
taccatatactagtgagaatccgtactggcattagattctgtttttttaa
atctgtgtaaaaattaaatcatatatctttctataggttgtgaatatttt
tcaataatacttttagttatgaaagaaaattttatgaattgccatcctta
actggtttcatatgaagttggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_68072516_68073640
seq2: B6Ng01-284A18.b_46_1163

seq1  GAATTCCTTGTTTTTTCATGACCATAAGTTTTATGCTATTTCCTGTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGTTTTTTCATGACCATAAGTTTTATGCTATTTCCTGTATCT  50

seq1  TACCTTACTCCATTTGAAGTTTATGATGAAGTGTCAAGCAGACTGCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTACTCCATTTGAAGTTTATGATGAAGTGTCAAGCAGACTGCCCTC  100

seq1  TCTATCCTCTTCCATTTGTACATTTATACGTGGCTGGGCAACATCACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCTCTTCCATTTGTACATTTATACGTGGCTGGGCAACATCACATC  150

seq1  ATTCACTATATTTTCTTCAATAAGATTTAGGTGTTATATAGCCAGCAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTATATTTTCTTCAATAAGATTTAGGTGTTATATAGCCAGCAACA  200

seq1  GCAATGAGTAAACCAATGACAGGTAATAGCACTAAAATACAAAGCTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGTAAACCAATGACAGGTAATAGCACTAAAATACAAAGCTCTTG  250

seq1  ACATGTCATATGATCACTCTCTAGATGAACTATATTATTCAGAGATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCATATGATCACTCTCTAGATGAACTATATTATTCAGAGATATTT  300

seq1  CTTTGCCTAACTAGCAGTAAACTACTAATAGGAACATGAAAAACAAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCTAACTAGCAGTAAACTACTAATAGGAACATGAAAAACAAGTAA  350

seq1  ACGCATGTCCCAATACAAATATAAAATCACTTCACATTTTTGTTTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATGTCCCAATACAAATATAAAATCACTTCACATTTTTGTTTTCTGT  400

seq1  GTAGTTTGTCATTAATGCTAATATCCACTGATTTGCAAATGCAATTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTGTCATTAATGCTAATATCCACTGATTTGCAAATGCAATTGGGG  450

seq1  GAATAAAAATTACAATGAGAGATTAGCATGAAACTACATTATAATTAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAAATTACAATGAGAGATTAGCATGAAACTACATTATAATTAAAG  500

seq1  CAGATATTGAAAGTATATAGTGACTTAAAATGCATGGCTGTGGTATGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTGAAAGTATATAGTGACTTAAAATGCATGGCTGTGGTATGGGA  550

seq1  TTTCAGTGGAGGAAAGGAGCTTCTGGGAAGGCCTAATTATGACTGCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTGGAGGAAAGGAGCTTCTGGGAAGGCCTAATTATGACTGCCATC  600

seq1  ATCATCCATACACATAAAGTATTTACAAAACTGTTCAGAGTTCTATCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCATACACATAAAGTATTTACAAAACTGTTCAGAGTTCTATCAAC  650

seq1  AAATTGCTTCATCAAATGATCATGTCAACATATCAACATTAAAGGATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTCATCAAATGATCATGTCAACATATCAACATTAAAGGATTAA  700

seq1  ATGATACTAAACCATAAGTTTAGAGCTCATGTTTATATATCATGAATATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTAAACCATAAGTTTAGAGCTCATGTTTATATATCATGAATATA  750

seq1  TATATATATATATATATTCATGTTTATATTTAGAACTCATGATAAATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATTCATGTTTATATTTAGAACTCATGATAAATACA  800

seq1  TCATGATCATATTTAGCATTCATGCTGCATGAAAGCAAATGAACCTGCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATCATATTTAGCATTCATGCTGCATGAAAGCAAATGAACCTGCAA  850

seq1  TGCCTACAGCTGTTCTTAAGCTCAGACTACATTCTCACACAGATCAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAGCTGTTCTTAAGCTCAGACTACATTCTCACACAGATCAGTTT  900

seq1  TCTCAGTAATATGAGATCTGATATCTGGAGTCATGGAGTTTTTTGCATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTAATATGAGATCTGATATCTGGAGTCATGGAGTTTTTTGCATGT  950

seq1  CTATCTAATAAGGGCTAGAAGAAATACAGGAGAAATTGTGTTGTTTCTTG  1000
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTATCTAATAAGGGCTAGAAGAAATACAGGAG-AATTGTGTTGTTTCTTG  999

seq1  TATATCTAGCAAATTAGATTTTGTTTGCTCATTTG-TAACTCGGCCACAT  1049
      |||||||||| |||||||||||||||||||||||| |||||||| |||||
seq2  TATATCTAGC-AATTAGATTTTGTTTGCTCATTTGTTAACTCGG-CACAT  1047

seq1  TACCATTGCCACAACTCTAGCAGACATTATGGCTGATAAACACTTTCTCC  1099
      || |||||| || |||||||||||||  || ||||||||||||||||| |
seq2  TA-CATTGCAAC-ACTCTAGCAGACA-GAT-GCTGATAAACACTTTCT-C  1092

seq1  ATA-CTTGGGGAGAAAGAAAAACATGA  1125
      ||| ||||||||| ||| |||||||||
seq2  ATACCTTGGGGAG-AAGGAAAACATGA  1118


seq1: chr12_68142647_68143818
seq2: B6Ng01-284A18.g_66_1238 (reverse)

seq1  TCCCAAACTCATAGGAAACCAGTAAAAGAATGCAATATCATAAATTTTTC  50
      ||||||  ||||| ||||||||| || ||  ||||| ||||||| |||||
seq2  TCCCAACTTCATATGAAACCAGTTAAGGATGGCAAT-TCATAAAATTTTC  49

seq1  TTTAATAATTAAAAGTATTATTTAAAAATA-TCACAAACTATAGAAAGAT  99
      ||| |||| ||||||||||||| ||||||| |||||| ||||||||||| 
seq2  TTTCATAACTAAAAGTATTATTGAAAAATATTCACAACCTATAGAAAGA-  98

seq1  TATATGATTT-ATTTTTACACAGATTT-AAAAAACAGATTCTAATGCCAG  147
      |||||||||| |||||||||||||||| |||||||||| |||||||||||
seq2  TATATGATTTAATTTTTACACAGATTTAAAAAAACAGAATCTAATGCCAG  148

seq1  TACGGA-TCTCACTAGTATATGGTAATCTTCACATCTTATGAGAATGGAA  196
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  TACGGATTCTCACTAGTATATGGTAATC-TCACATCTTATGAGAATGGAA  197

seq1  ATGAAGAAGTCAGGGGAAGCTGCGAAACATGAGATATCTTTACACAGAAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAGTCAGGGGAAGCTGCGAAACATGAGATATCTTTACACAGAAC  247

seq1  TCCTTACTAATGAGAACTAATAGCCCTAAAAGATGCTCAGATAGTCACCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTAATGAGAACTAATAGCCCTAAAAGATGCTCAGATAGTCACCA  297

seq1  GGGCACTGAACTGAACCACAGGGTTCAGTTCCGTGCTTAAGTTTGTGTGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTGAACTGAACCACAGGGTTCAGTTCCGTGCTTAAGTTTGTGTGG  347

seq1  TGCTGAGGAAAGTCTCTGCCTTTCTCTTACTTCTGATTTACTCCATTTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGAAAGTCTCTGCCTTTCTCTTACTTCTGATTTACTCCATTTCT  397

seq1  TCCACATACAGCAATACGCGTGGGAGGAAGTCTGACTTGGCAAAGAACTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATACAGCAATACGCGTGGGAGGAAGTCTGACTTGGCAAAGAACTT  447

seq1  ATACTATTTCCAGGGTTGAAAATAAATCATATTCAATGTAGAAACTTTTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTATTTCCAGGGTTGAAAATAAATCATATTCAATGTAGAAACTTTTA  497

seq1  AATCAGCATCTGGGTTGACTATCAAAGTTTTGCTTGACAATCTGAACAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCATCTGGGTTGACTATCAAAGTTTTGCTTGACAATCTGAACAAG  547

seq1  ACACACTCATTTACAGGAAATGAAAGTTGTAAATGATATAGTCTCTCTAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCATTTACAGGAAATGAAAGTTGTAAATGATATAGTCTCTCTAA  597

seq1  AATGCAAAATGTAGATGCAAGACTTTTTGTCCAATATATTAATAGGAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAAATGTAGATGCAAGACTTTTTGTCCAATATATTAATAGGAAAG  647

seq1  ATGAGCAAGTTCTGACAGAAACTAAGATTCTAAACCACAGTATAATTTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAAGTTCTGACAGAAACTAAGATTCTAAACCACAGTATAATTTTT  697

seq1  CTCTGTGTCTTGACCCAACATTTGTCTACAACTAAAAGCAATCACACTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTCTTGACCCAACATTTGTCTACAACTAAAAGCAATCACACTCT  747

seq1  CTCAGAGTCATGTAATAATTCCCTAGTCAACAAATTCTCCTATGCTTCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGTCATGTAATAATTCCCTAGTCAACAAATTCTCCTATGCTTCAT  797

seq1  TCATCAGGCAAGTTAAGCACACATGAGAGACTATGTTTCTTTCTTTTTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGGCAAGTTAAGCACACATGAGAGACTATGTTTCTTTCTTTTTTT  847

seq1  TTCTCCACTTAAAAAAGTCCCTCCAAGGAAAATACCTAATAAAAAAAAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCACTTAAAAAAGTCCCTCCAAGGAAAATACCTAATAAAAAAAAGT  897

seq1  CACCAAAAAAAAGTCCCTCCAAAGACAGAGTAATAGTTTAAGTTTTGCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAAAAAAAGTCCCTCCAAAGACAGAGTAATAGTTTAAGTTTTGCTT  947

seq1  TGAAATATTATAATAAAACATCATATCAGGATTATCTTTTCACAGGTTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTATAATAAAACATCATATCAGGATTATCTTTTCACAGGTTAA  997

seq1  AAAACAATACAATTTTTTAAAAATTTCAATAGATGAATCACACTTTATGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATACAATTTTTTAAAAATTTCAATAGATGAATCACACTTTATGG  1047

seq1  AAAATTATCTAAACTGCACAGCTTCTGGGGTACTTATATTTTTAACAATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTATCTAAACTGCACAGCTTCTGGGGTACTTATATTTTTAACAATA  1097

seq1  AACAAATTTTGATGATTTACTGGTACTGTACATTTTCACAGTCCTAGTGA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTTTGATGATTTACTGGTACTGTACATTTTCACAGTCCTAGTGA  1147

seq1  TATGTAGAGATGGAGATATGGAATTC  1172
      ||||||||||||||||||||||||||
seq2  TATGTAGAGATGGAGATATGGAATTC  1173


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