BAC Information

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BAC

Clone NameB6Ng01-284B19
Chromosome4 (Build37)12 (Build37)
Map Location 37,804,033 - 37,804,831110,205,564 - 110,206,724
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042132, LOC545600, LOC621458
Downstream geneLOC277771, LOC100039448, LOC665520
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284B19.bB6Ng01-284B19.g
ACCGA082896GA082897
length7991,148
definitionB6Ng01-284B19.b B6Ng01-284B19.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(37,804,033 - 37,804,831)(110,205,564 - 110,206,724)
sequence
gaattccatacaatgcatatttataatattctaacattttccgttcttcc
ctccattatgatcaactttcagttttccccctcaacctccaagaaatcca
atttgagttgccctactagtccacagagtgttagtaccctagtgtctggt
caacatattagaagttacatcattaaagaaaacggaccttccctctttca
gtaactctcaatgccaatacactctcagctagtgtggtataagaccaatt
tttgcattctgtgttcagatttgtacatacatggaattgtctgataactt
ctggaaattaccactatcttgatattatataccatttctgactcttgtga
tctttctgacctcacttcaatgaagaaatctgagtttctgtgagacattt
gtgatgtttatgtttttctgatggatgagcacttcattctcttttattta
tggtatgtcgacattttgaaggtttctacaaagagaagcttcggagtttt
gaggaaaactctgttctatgggtatagtaggaagtcattaggacttattt
tagaattgcatgcatttagcagaataacactattagattatattttagtc
attatgacatatatctacagtatatgggcccctttatcagtgttgtccca
tgaagattgccttagatataaatataaagtagttggttacaaccatggct
ttaataacattatattggttgggatgtattctcaagaaaatcacagttaa
aaggattcagagatagttgagacagaggattattttttcttctagttga

gaattcaggtatgtttaagaaggccataaaggagaacgaagaataaagag
agggggagaaggaaaacaaacagcaaataaaaatctgattccatcaacag
cttcattaaataaagtaaatgcgacaatgaaaagagattgtcagaatgga
gtaaaaagtcagactgggaatggttcagtggtcaaaagcactggctgctc
ttgaagagggtctggctttaattcccagcacccatgtggcagcccacacc
tgcctgtaactccaactctagtctgacatgctcttttcgcctctgtgttg
tacaaacatacatgtaggcaaaacacccataaatgcatttaaaaaagaac
atgctactgctgttgagaagtggtatggtttgtcaggaaaggaacaacta
gggtaaaggtcaacaaactgaatacaaagtagcatccacagcatccacag
tgagctcgaagggcaggggaaggctggccaggcgagacgagcaggccagg
agggtggtgtggcagggggaaagagtagattcatcaagaaggtagtgaca
ggtgtgcatgctcactggccagcaggacagctgagtgcttgagaagagtt
ttcacagaaggagagccagcaaatctacaatcccagctggagacctaaca
cccttcttcaaacagttgcttgtaggaactgaacaagtcggccaaagtag
accagaatgatcttgcgactcgcctgactgacactcatggagtgctctac
atgagatgtgtagggttcacgtgcctctcagcctcagctctgcttccttg
aggttggcacaaaccaaaggatttctgatcacagcggggttatgttggca
acgagtaatgactcaccaagcaacagggagagctgaggatggttggcaac
ggtttccaagcatcccagaaacttctgaaatgtcatttagtgtgtatgtg
tgcctgtgtgtgtacgcatactctctcacgttctgttgctcatggtgggg
attgggacactagacgagtcagttcttcctcacatgtgggtctggggatt
aactttgtctcagctgccagcaggcaacttacctctgaatcatctcacaa
ttctagtatcctgtggagctcaatgcctctagtccatggaggaggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_37804033_37804831
seq2: B6Ng01-284B19.b_44_842

seq1  GAATTCCATACAATGCATATTTATAATATTCTAACATTTTCCGTTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACAATGCATATTTATAATATTCTAACATTTTCCGTTCTTCC  50

seq1  CTCCATTATGATCAACTTTCAGTTTTCCCCCTCAACCTCCAAGAAATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTATGATCAACTTTCAGTTTTCCCCCTCAACCTCCAAGAAATCCA  100

seq1  ATTTGAGTTGCCCTACTAGTCCACAGAGTGTTAGTACCCTAGTGTCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTTGCCCTACTAGTCCACAGAGTGTTAGTACCCTAGTGTCTGGT  150

seq1  CAACATATTAGAAGTTACATCATTAAAGAAAACGGACCTTCCCTCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATATTAGAAGTTACATCATTAAAGAAAACGGACCTTCCCTCTTTCA  200

seq1  GTAACTCTCAATGCCAATACACTCTCAGCTAGTGTGGTATAAGACCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCTCAATGCCAATACACTCTCAGCTAGTGTGGTATAAGACCAATT  250

seq1  TTTGCATTCTGTGTTCAGATTTGTACATACATGGAATTGTCTGATAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTCTGTGTTCAGATTTGTACATACATGGAATTGTCTGATAACTT  300

seq1  CTGGAAATTACCACTATCTTGATATTATATACCATTTCTGACTCTTGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATTACCACTATCTTGATATTATATACCATTTCTGACTCTTGTGA  350

seq1  TCTTTCTGACCTCACTTCAATGAAGAAATCTGAGTTTCTGTGAGACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGACCTCACTTCAATGAAGAAATCTGAGTTTCTGTGAGACATTT  400

seq1  GTGATGTTTATGTTTTTCTGATGGATGAGCACTTCATTCTCTTTTATTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTTATGTTTTTCTGATGGATGAGCACTTCATTCTCTTTTATTTA  450

seq1  TGGTATGTCGACATTTTGAAGGTTTCTACAAAGAGAAGCTTCGGAGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGTCGACATTTTGAAGGTTTCTACAAAGAGAAGCTTCGGAGTTTT  500

seq1  GAGGAAAACTCTGTTCTATGGGTATAGTAGGAAGTCATTAGGACTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAACTCTGTTCTATGGGTATAGTAGGAAGTCATTAGGACTTATTT  550

seq1  TAGAATTGCATGCATTTAGCAGAATAACACTATTAGATTATATTTTAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGCATGCATTTAGCAGAATAACACTATTAGATTATATTTTAGTC  600

seq1  ATTATGACATATATCTACAGTATATGGGCCCCTTTATCAGTGTTGTCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGACATATATCTACAGTATATGGGCCCCTTTATCAGTGTTGTCCCA  650

seq1  TGAAGATTGCCTTAGATATAAATATAAAGTAGTTGGTTACAACCATGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTGCCTTAGATATAAATATAAAGTAGTTGGTTACAACCATGGCT  700

seq1  TTAATAACATTATATTGGTTGGGATGTATTCTCAAGAAAATCACAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACATTATATTGGTTGGGATGTATTCTCAAGAAAATCACAGTTAA  750

seq1  AAGGATTCAGAGATAGTTGAGACAGAGGATTATTTTTTCTTCTAGTTGA  799
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCAGAGATAGTTGAGACAGAGGATTATTTTTTCTTCTAGTTGA  799


seq1: chr12_110205564_110206724
seq2: B6Ng01-284B19.g_65_1212

seq1  GAATTCAGGTATGTTTAAGAAGGCCATAAAGGAGAACGAAGAATAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTATGTTTAAGAAGGCCATAAAGGAGAACGAAGAATAAAGAG  50

seq1  AGGGGGAGAAGGAAAACAAACAGCAAATAAAAATCTGATTCCATCAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAGAAGGAAAACAAACAGCAAATAAAAATCTGATTCCATCAACAG  100

seq1  CTTCATTAAATAAAGTAAATGCGACAATGAAAAGAGATTGTCAGAATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAAATAAAGTAAATGCGACAATGAAAAGAGATTGTCAGAATGGA  150

seq1  GTAAAAAGTCAGACTGGGAATGGTTCAGTGGTCAAAAGCACTGGCTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAGTCAGACTGGGAATGGTTCAGTGGTCAAAAGCACTGGCTGCTC  200

seq1  TTGAAGAGGGTCTGGCTTTAATTCCCAGCACCCATGTGGCAGCCCACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAGGGTCTGGCTTTAATTCCCAGCACCCATGTGGCAGCCCACACC  250

seq1  TGCCTGTAACTCCAACTCTAGTCTGACATGCTCTTTTCGCCTCTGTGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAACTCCAACTCTAGTCTGACATGCTCTTTTCGCCTCTGTGTTG  300

seq1  TACAAACATACATGTAGGCAAAACACCCATAAATGCATTTAAAAAAGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACATACATGTAGGCAAAACACCCATAAATGCATTTAAAAAAGAAC  350

seq1  ATGCTACTGCTGTTGAGAAGTGGTATGGTTTGTCAGGAAAGGAACAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACTGCTGTTGAGAAGTGGTATGGTTTGTCAGGAAAGGAACAACTA  400

seq1  GGGTAAAGGTCAACAAACTGAATACAAAGTAGCATCCACAGCATCCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAGGTCAACAAACTGAATACAAAGTAGCATCCACAGCATCCACAG  450

seq1  TGAGCTCGAAGGGCAGGGGAAGGCTGGCCAGGCGAGACGAGCAGGCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCGAAGGGCAGGGGAAGGCTGGCCAGGCGAGACGAGCAGGCCAGG  500

seq1  AGGGTGGTGTGGCAGGGGGAAAGAGTAGATTCATCAAGAAGGTAGTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGTGTGGCAGGGGGAAAGAGTAGATTCATCAAGAAGGTAGTGACA  550

seq1  GGTGTGCATGCTCACTGGCCAGCAGGACAGCTGAGTGCTTGAGAAGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCATGCTCACTGGCCAGCAGGACAGCTGAGTGCTTGAGAAGAGTT  600

seq1  TTCACAGAAGGAGAGCCAGCAAATCTACAATCCCAGCTGGAGACCTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGAAGGAGAGCCAGCAAATCTACAATCCCAGCTGGAGACCTAACA  650

seq1  CCCTTCTTCAAACAGTTGCTTGTAGGAACTGAACAAGTCGGCCAAAGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCTTCAAACAGTTGCTTGTAGGAACTGAACAAGTCGGCCAAAGTAG  700

seq1  ACCAGAATGATCTTGCGACTCGCCTGACTGACACTCATGGAGTGCTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAATGATCTTGCGACTCGCCTGACTGACACTCATGGAGTGCTCTAC  750

seq1  ATGAGATGTGTAGGGTTCACGTGCCTCTCAGCCTCAGCTCTGCTTCCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATGTGTAGGGTTCACGTGCCTCTCAGCCTCAGCTCTGCTTCCTTG  800

seq1  AGGTTGGCACAAACCAAAGGATTTCTGATCACAGCGGGGTTATGTTGGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGCACAAACCAAAGGATTTCTGATCACAGCGGGGTTATGTTGGCA  850

seq1  ACGAGTAATGACTCACCAAGCAACAGGGAGAGCTGAGGATGGTTGGCAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTAATGACTCACCAAGCAACAGGGAGAGCTGAGGATGGTTGGCAAC  900

seq1  GGTTTCCAAGCATCCCAGAAACTTCTGAAATGTCATTTAGTGTGTATGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAAGCATCCCAGAAACTTCTGAAATGTCATTTAGTGTGTATGTG  950

seq1  TGCCTGTGTGTGTACGCATACTCTCTCACGTTCTGTTGCTCAT-GTGGGG  999
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGCCTGTGTGTGTACGCATACTCTCTCACGTTCTGTTGCTCATGGTGGGG  1000

seq1  ATTGGGACAACTAGACGGAGTCAGTTCTTCCCTTCCACCATGTGGGTTCT  1049
      |||||||| ||||||| ||||||||||||||  ||   |||||||| |||
seq2  ATTGGGAC-ACTAGAC-GAGTCAGTTCTTCC--TC--ACATGTGGG-TCT  1043

seq1  GGGGATTAAACTTTGGTCTTCAGGCTTGGCAGCAAGCACCTTTACCTCCT  1099
      ||||||| |||||| ||| ||||   || ||||| ||| | |||||| ||
seq2  GGGGATT-AACTTT-GTC-TCAG--CTGCCAGCAGGCAAC-TTACCT-CT  1086

seq1  GATCCATCTCACATTTCTAAGTATCCTGTGGAGCTCAATGCTCCTAGTTC  1149
      ||  ||||||||| |||| ||||||||||||||||||||||  ||||| |
seq2  GAATCATCTCACAATTCT-AGTATCCTGTGGAGCTCAATGCCTCTAGTCC  1135

seq1  AT-GAGGAGGAAT  1161
      || ||||||||||
seq2  ATGGAGGAGGAAT  1148


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