BAC Information

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BAC

Clone NameB6Ng01-284B20
Chromosome12 (Build37)
Map Location 75,500,772 - 75,501,331
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666356, Tmem30b, 2210039B01Rik, Prkch, EG666385, LOC100041489, Hif1a, EG277089, Snapc1, Syt16, 1700086L19Rik, Dbpht2, LOC671971
Downstream geneKcnh5, Rhoj
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284B20.bB6Ng01-284B20.g
ACCGA082898GA082899
length1,163554
definitionB6Ng01-284B20.b B6Ng01-284B20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccagatatcttactattgctgccagagcggctttacttttgg
tggagcagagcattcaagatgctgccttgaaacgctgagatgagtcaaag
cctattgcattgtgtattttgccaacagaatcacaaccaaagggggtctt
atggcaaggggctcccttgctctggatacatccaaagatttccccagcca
aaacacttgttcattacccccctcagtggctcaattggctttgcttggta
ttcagcaaggtgtggaattttctggcattccaccagaggatttgatagct
ccagataatggtaaacagctagaagtgttatcagctacagcagatgagtg
ggccattttgaggtgcagttttcagggccaatttgatcatcattttccca
aagatccaatattacaattgattaaagatcatcctgtgattttttttcct
cacgttacttaaaaaaatcctttaccggatgctctgcttatttttacaga
tggttctaagacaggatatggagcatatttaatagcaggatcatcaccag
ttaccatacaatttcccccccccgcatcaccacaagttattgaattgcaa
attgtgattaaggtgtttgaattaactccaggcccttttaatttgatttc
tgatagccaatatgttgttaatatattgcaatgtttggaggtggtaggca
aagttaatctaaaatctaccattggaaaattagttcttacattgcaagat
tttatcttgaatagacattcaccgttttttgtacaacatattcatgctca
taccagattgcctggaccccttgcagaaagggaatgatattgtagataaa
gcttctaaggcatgcatggcctttttaagtgcctcacctattgatttggc
acatgattttcattcacaatttcgtgttaattccaaaaccttatcctccc
aattttaaaatttctcaagcagagcgagagatattgtgaaaatgtgccaa
atattgtgcccatatgctcagatatgggtgggggtcgtcacgtgatacgc
ccctgactatggcaattgatgtaccatttctctgatttcagaagtaaata
tcctcatgtctcaatagatcagctcgagttcaatttggcctctgcatacc
aggaaaggaaagg
ctaacaaattgaaaaacactggaaatgagaaatgcatgatttacacctta
cccactgaacacaccagctcactgcagtaaacatcaagtagagagtcagt
tattttctgtccttccactctgctgcttgggagctatagctcactgccac
tgcccagcgaaacaagggcaagtcctgatggtctgcaataggatgttaga
aataggaccatggctgtgaagcccagagcttcacaaaatactgcagtctg
tgtgtgacttatatgaagggaggttaatgatgaaatgggctcattactgt
ggaggctgaggtatcccatattgtgccatctgcaagctggtgaactgggg
aaggtggtggtgtgactcagtcaggctccaaaggcctgagaaccagagta
actgatgatctaaggattggcccatgtttaaaagctccaaaactctgtct
gcggttttctctgcaagatttttatttagttttgtttgggggcatgtcgc
aagagtggaaggcagatgtagagggacagggagatgagtgggattggggt
gtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_75500772_75501331
seq2: B6Ng01-284B20.g_64_623

seq1  GAATTCCTAACAAATTGAAAAACACTGGAAATGAGAAATGCATGATTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAACAAATTGAAAAACACTGGAAATGAGAAATGCATGATTTAC  50

seq1  ACCTTACCCACTGAACACACCAGCTCACTGCAGTAAACATCAAGTAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACCCACTGAACACACCAGCTCACTGCAGTAAACATCAAGTAGAGA  100

seq1  GTCAGTTATTTTCTGTCCTTCCACTCTGCTGCTTGGGAGCTATAGCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTATTTTCTGTCCTTCCACTCTGCTGCTTGGGAGCTATAGCTCAC  150

seq1  TGCCACTGCCCAGCGAAACAAGGGCAAGTCCTGATGGTCTGCAATAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACTGCCCAGCGAAACAAGGGCAAGTCCTGATGGTCTGCAATAGGAT  200

seq1  GTTAGAAATAGGACCATGGCTGTGAAGCCCAGAGCTTCACAAAATACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAATAGGACCATGGCTGTGAAGCCCAGAGCTTCACAAAATACTGC  250

seq1  AGTCTGTGTGTGACTTATATGAAGGGAGGTTAATGATGAAATGGGCTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGTGTGACTTATATGAAGGGAGGTTAATGATGAAATGGGCTCAT  300

seq1  TACTGTGGAGGCTGAGGTATCCCATATTGTGCCATCTGCAAGCTGGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGGAGGCTGAGGTATCCCATATTGTGCCATCTGCAAGCTGGTGAA  350

seq1  CTGGGGAAGGTGGTGGTGTGACTCAGTCAGGCTCCAAAGGCCTGAGAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAAGGTGGTGGTGTGACTCAGTCAGGCTCCAAAGGCCTGAGAACC  400

seq1  AGAGTAACTGATGATCTAAGGATTGGCCCATGTTTAAAAGCTCCAAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACTGATGATCTAAGGATTGGCCCATGTTTAAAAGCTCCAAAACT  450

seq1  CTGTCTGCGGTTTTCTCTGCAAGATTTTTATTTAGTTTTGTTTGGGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGCGGTTTTCTCTGCAAGATTTTTATTTAGTTTTGTTTGGGGGCA  500

seq1  TGTCGCAAGAGTGGAAGGCAGATGTAGAGGGACAGGGAGATGAGTGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGCAAGAGTGGAAGGCAGATGTAGAGGGACAGGGAGATGAGTGGGAT  550

seq1  TGGGGTGTAT  560
      ||||||||||
seq2  TGGGGTGTAT  560