BAC Information

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BAC

Clone NameB6Ng01-285C22
Chromosome12 (Build37)
Map Location 25,697,504 - 25,836,506
singlet/doubletdoublet
Overlap geneC330002I19Rik, Id2
Upstream geneLOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2, LOC668719, Mboat2, EG629397
Downstream geneLOC100042973, LOC100042974, LOC668726
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285C22.bB6Ng01-285C22.g
ACCGA083696GA083697
length1,0741,068
definitionB6Ng01-285C22.b B6Ng01-285C22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,835,420 - 25,836,506)(25,697,504 - 25,698,575)
sequence
gaattctttcttcctttctggaaagatctgcctgagataaaatgtctctc
cactcagtgaaaacccttgaaaaaaatttatgacaagcccagtttttggt
tatttgtttttgttttgttttgttttgttttgtttttaagacagggtctc
actgtgtagccctagctgtcctggaaccctatctgtagaccaggctggcc
tcaaactcagagattcaacctgcctctgcctcccaagtgctgggattaaa
gacatgtgccaccactgccctgctaacaagcccagtttttttttaacaca
atgttaaaacaagaatctaagtcttgagttggctcaagcctgtcctgtaa
tcaaaattggtgtttatgtgtattaaagttctcctagagccagccatatg
tctcagcaggtcaggcaccggccatacaagactgacacctgactttgatc
cctggatcccacataaaggtagaaggagaggcctgcctgggagatgctgt
cctctgacctccacacccacaccacagcagaagacacacacacatacaaa
caatgggttttaaattacctctgtctgaaggccaatgtcattttcactaa
aatactcttcagatcaaataaatatcaagggttttctttggactttctcc
ttctgaggcatgtgctttctgggaaagaagtgtgggtaagaatataaaat
gaggagaagccaagaagaggaactgtgaactatccatggtcacccagggc
ctgagaaagcaagcagccaactctgtccatttgccccctggggagacaca
atgttccttctctttcctccttcctctagtccaaaatgccctgtcagaga
tctggtatgaactctgtactcccacaagagtggggagcagcacccttcag
ttacatgcacattttaaacttgtggggggttgattcctctgcctataatg
ttattctccccttccaccctttagcatcaagccaatttcacagtacacac
ggttcctttctaaacagttgtcaagatgttctgtgttcacatctaagcag
ggcaagaagcctttcaatacacag
gaattcagagataatatgagtgacaaatgatagcgccaaggtcagggggg
tgtgtgatgctgcatgttggatttctctcttggcagcccaggttcttggg
gacctatggtttcatctacctttcccatgcgtcaggactcgggggagtgt
tcttctcttaggagtgggataccttagccactccagcccactctacaggg
tgccttcaactctttgaggaaatgccagggaagttaagagtggctgtgcc
tgggataaaatcgtgttacactttaaaacaccctaaaaatagagatgctg
aatccctagaaccatgaaggaacttacctgctttattgttttatggctcc
tagtacgaggctttatggagcttgaccgtgattttctttacagagttctg
tgcacttcttatctgagacattacgttttctctaacacatgggatgcctg
cctgccaactctactgagtcattgctctggaaagtgcctcagaagtgact
gtacttgactagcctgcaatctttctctttggttaatattgtgaattctg
cttttcttacccactgagttggctctgcagtctgttttgttggtcttacc
ataagcgtgcatgttaactctcaaggatgggtgtttctcactggtgctgt
tgtttcaggatacttaccgcagaaggcagatgcagagaaccatcacgagg
cagatgtcctttgatctcacaaagctgctggttactgaggattggttcag
tgacatcagtccacaaaccatgagacggttactcaatattgtttcggtga
caggtgacttttgtttttcaagttctgtgacagataataagttttatttt
gtttatattgttttgagatagtaggcattgaactcaggcttgtgcaagct
ctgtgaatgttgtgctattgagttgcaccccccagactcaccataagttt
taacgttaacagagcactttgagtgtgagctgtgttgtagtggtagatga
tagtagtaacctttttggtatagtacttgaccatctgaatcacttgggat
ttatcgtaaagttcatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25835420_25836506
seq2: B6Ng01-285C22.b_46_1119 (reverse)

seq1  CTGTGTTATTGGAAAGGCTTCCTGCCCCTGCTTTAGGATTGGTTGGAACA  50
      ||||| |||| |||||||||| || ||||||||   |||  ||  |||||
seq2  CTGTG-TATT-GAAAGGCTTCTTG-CCCTGCTT--AGAT--GT--GAACA  41

seq1  CAGAACATCTTGGAACAACTTGTTTAGGAAAGGACCGTGTGTACTGTTGA  100
      ||||||||||||  ||||| ||||||| || | ||||||||||||||  |
seq2  CAGAACATCTTG--ACAAC-TGTTTAGAAAGGAACCGTGTGTACTGTGAA  88

seq1  ATTGGCTTGATGGCTAAAGGGTGGAAGGGGAGAATAACATTATAGGCAGA  150
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTGAT-GCTAAAGGGTGGAAGGGGAGAATAACATTATAGGCAGA  137

seq1  GGAATCAACCCCCCACAAGTTTAAAATGTGCATGTAACTGAAGGGTGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCAACCCCCCACAAGTTTAAAATGTGCATGTAACTGAAGGGTGCTG  187

seq1  CTCCCCACTCTTGTGGGAGTACAGAGTTCATACCAGATCTCTGACAGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCACTCTTGTGGGAGTACAGAGTTCATACCAGATCTCTGACAGGGC  237

seq1  ATTTTGGACTAGAGGAAGGAGGAAAGAGAAGGAACATTGTGTCTCCCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGACTAGAGGAAGGAGGAAAGAGAAGGAACATTGTGTCTCCCCAG  287

seq1  GGGGCAAATGGACAGAGTTGGCTGCTTGCTTTCTCAGGCCCTGGGTGACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAAATGGACAGAGTTGGCTGCTTGCTTTCTCAGGCCCTGGGTGACC  337

seq1  ATGGATAGTTCACAGTTCCTCTTCTTGGCTTCTCCTCATTTTATATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAGTTCACAGTTCCTCTTCTTGGCTTCTCCTCATTTTATATTCTT  387

seq1  ACCCACACTTCTTTCCCAGAAAGCACATGCCTCAGAAGGAGAAAGTCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACTTCTTTCCCAGAAAGCACATGCCTCAGAAGGAGAAAGTCCAA  437

seq1  AGAAAACCCTTGATATTTATTTGATCTGAAGAGTATTTTAGTGAAAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCCTTGATATTTATTTGATCTGAAGAGTATTTTAGTGAAAATGA  487

seq1  CATTGGCCTTCAGACAGAGGTAATTTAAAACCCATTGTTTGTATGTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCCTTCAGACAGAGGTAATTTAAAACCCATTGTTTGTATGTGTGT  537

seq1  GTGTCTTCTGCTGTGGTGTGGGTGTGGAGGTCAGAGGACAGCATCTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTCTGCTGTGGTGTGGGTGTGGAGGTCAGAGGACAGCATCTCCCA  587

seq1  GGCAGGCCTCTCCTTCTACCTTTATGTGGGATCCAGGGATCAAAGTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCCTCTCCTTCTACCTTTATGTGGGATCCAGGGATCAAAGTCAGG  637

seq1  TGTCAGTCTTGTATGGCCGGTGCCTGACCTGCTGAGACATATGGCTGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTCTTGTATGGCCGGTGCCTGACCTGCTGAGACATATGGCTGGCT  687

seq1  CTAGGAGAACTTTAATACACATAAACACCAATTTTGATTACAGGACAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGAACTTTAATACACATAAACACCAATTTTGATTACAGGACAGGC  737

seq1  TTGAGCCAACTCAAGACTTAGATTCTTGTTTTAACATTGTGTTAAAAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCAACTCAAGACTTAGATTCTTGTTTTAACATTGTGTTAAAAAAA  787

seq1  AACTGGGCTTGTTAGCAGGGCAGTGGTGGCACATGTCTTTAATCCCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGGCTTGTTAGCAGGGCAGTGGTGGCACATGTCTTTAATCCCAGCA  837

seq1  CTTGGGAGGCAGAGGCAGGTTGAATCTCTGAGTTTGAGGCCAGCCTGGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGGCAGAGGCAGGTTGAATCTCTGAGTTTGAGGCCAGCCTGGTC  887

seq1  TACAGATAGGGTTCCAGGACAGCTAGGGCTACACAGTGAGACCCTGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAGGGTTCCAGGACAGCTAGGGCTACACAGTGAGACCCTGTCTT  937

seq1  AAAAACAAAACAAAACAAAACAAAACAAAAACAAATAACCAAAAACTGGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAACAAAACAAAACAAAACAAAAACAAATAACCAAAAACTGGG  987

seq1  CTTGTCATAAATTTTTTTCAAGGGTTTTCACTGAGTGGAGAGACATTTTA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCATAAATTTTTTTCAAGGGTTTTCACTGAGTGGAGAGACATTTTA  1037

seq1  TCTCAGGCAGATCTTTCCAGAAAGGAAGAAAGAATTC  1087
      |||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCAGATCTTTCCAGAAAGGAAGAAAGAATTC  1074

seq1: chr12_25697504_25698575
seq2: B6Ng01-285C22.g_66_1133

seq1  GAATTCAGAGATAATATGAGTGACAAATGATAGCGCCAAGGTCAGGGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGATAATATGAGTGACAAATGATAGCGCCAAGGTCAGGGGGG  50

seq1  TGTGTGATGCTGCATGTTGGATTTCTCTCTTGGCAGCCCAGGTTCTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGATGCTGCATGTTGGATTTCTCTCTTGGCAGCCCAGGTTCTTGGG  100

seq1  GACCTATGGTTTCATCTACCTTTCCCATGCGTCAGGACTCGGGGGAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATGGTTTCATCTACCTTTCCCATGCGTCAGGACTCGGGGGAGTGT  150

seq1  TCTTCTCTTAGGAGTGGGATACCTTAGCCACTCCAGCCCACTCTACAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTAGGAGTGGGATACCTTAGCCACTCCAGCCCACTCTACAGGG  200

seq1  TGCCTTCAACTCTTTGAGGAAATGCCAGGGAAGTTAAGAGTGGCTGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCAACTCTTTGAGGAAATGCCAGGGAAGTTAAGAGTGGCTGTGCC  250

seq1  TGGGATAAAATCGTGTTACACTTTAAAACACCCTAAAAATAGAGATGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAAAATCGTGTTACACTTTAAAACACCCTAAAAATAGAGATGCTG  300

seq1  AATCCCTAGAACCATGAAGGAACTTACCTGCTTTATTGTTTTATGGCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTAGAACCATGAAGGAACTTACCTGCTTTATTGTTTTATGGCTCC  350

seq1  TAGTACGAGGCTTTATGGAGCTTGACCGTGATTTTCTTTACAGAGTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACGAGGCTTTATGGAGCTTGACCGTGATTTTCTTTACAGAGTTCTG  400

seq1  TGCACTTCTTATCTGAGACATTACGTTTTCTCTAACACATGGGATGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTCTTATCTGAGACATTACGTTTTCTCTAACACATGGGATGCCTG  450

seq1  CCTGCCAACTCTACTGAGTCATTGCTCTGGAAAGTGCCTCAGAAGTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAACTCTACTGAGTCATTGCTCTGGAAAGTGCCTCAGAAGTGACT  500

seq1  GTACTTGACTAGCCTGCAATCTTTCTCTTTGGTTAATATTGTGAATTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGACTAGCCTGCAATCTTTCTCTTTGGTTAATATTGTGAATTCTG  550

seq1  CTTTTCTTACCCACTGAGTTGGCTCTGCAGTCTGTTTTGTTGGTCTTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTACCCACTGAGTTGGCTCTGCAGTCTGTTTTGTTGGTCTTACC  600

seq1  ATAAGCGTGCATGTTAACTCTCAAGGATGGGTGTTTCTCACTGGTGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCGTGCATGTTAACTCTCAAGGATGGGTGTTTCTCACTGGTGCTGT  650

seq1  TGTTTCAGGATACTTACCGCAGAAGGCAGATGCAGAGAACCATCACGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAGGATACTTACCGCAGAAGGCAGATGCAGAGAACCATCACGAGG  700

seq1  CAGATGTCCTTTGATCTCACAAAGCTGCTGGTTACTGAGGATTGGTTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTCCTTTGATCTCACAAAGCTGCTGGTTACTGAGGATTGGTTCAG  750

seq1  TGACATCAGTCCACAAACCATGAGACGGTTACTCAATATTGTTTCGGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCAGTCCACAAACCATGAGACGGTTACTCAATATTGTTTCGGTGA  800

seq1  CAGGTGACTTTTGTTTTTCAAGTTCTGTGACAGATAATAAGTTTTATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGACTTTTGTTTTTCAAGTTCTGTGACAGATAATAAGTTTTATTTT  850

seq1  GTTTATATTGTTTTGAGATAGTAGGCATTGAACTCAGGGCTTGTGCAAGC  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTTTATATTGTTTTGAGATAGTAGGCATTGAACTCA-GGCTTGTGCAAGC  899

seq1  TCTGTGAATGTTGTGCTATTGAGTTGCA-CCCCCAGACTCACCATAAGTT  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCTGTGAATGTTGTGCTATTGAGTTGCACCCCCCAGACTCACCATAAGTT  949

seq1  TTAACGTTAACAGAGCACTTTGAGTGTGAGCTGTGTTGGTAGTGGTAGAT  999
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTAACGTTAACAGAGCACTTTGAGTGTGAGCTGTGTT-GTAGTGGTAGAT  998

seq1  GATAGTAGTAACTTTTTTGTAATAGTACTTGACAATCTGATATCACTTGG  1049
      |||||||||||| ||||||  |||||||||||| |||||| |||||||||
seq2  GATAGTAGTAACCTTTTTGGTATAGTACTTGACCATCTGA-ATCACTTGG  1047

seq1  GAATTTATCTTAAAAGTTCATCA  1072
      | ||||||| | |||||||||||
seq2  G-ATTTATCGT-AAAGTTCATCA  1068