BAC Information

Click to search

BAC

Clone NameB6Ng01-285N18
Chromosome12 (Build37)
Map Location 67,284,570 - 67,285,181
singlet/doubletsinglet
Overlap genenone
Upstream geneWdr20b
Downstream geneLOC100040700, EG238217, Mdga2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285N18.bB6Ng01-285N18.g
ACCGA084201GA084202
length871612
definitionB6Ng01-285N18.b B6Ng01-285N18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaagaatcttaaatggttgagaaacaaagaaatgttca
acatccttaattatcagggaaatgcaaatcaaagtgatcctgaaattctt
acatccattagaaaggttaagatcaaaacctcaggtgacagcagctgctg
gcgaggatgtggagaaagaggaacactcctccattgctggtgggactgca
aacttgtgcaactactctggaaatcaatctgacagattttcaggaacctg
tgaatatttctacctgaggaaccagctatactgctctgaggcatataccc
aaaagatgttccaccataccacagggacaggcgttctactatgttcatag
cagcttgttttataataaccagaaactggaaacaacccagacagatgccc
cttaagaagaatggataaagaaactgtgattcatttacacaatggaatgc
tgctcagtttttcaaaacaaggacatcaggaatttcacaggcaaatggat
ggaactagaaaatatcatcctgagtgaggtaacccagacacaaaagaaaa
tacatgttttgtgctcatcagtggatattagccataaagtacaggatacc
catgctatacttcacagacccaaagaagctaaacatcaagcgaggatgct
taaatttcacttagaagggggaataaaatgatcataggaggcagatggag
ggagggaacaaggtaggagagggataaggaggggcatgggattcaggatc
acgtgaggggagagacacgagagagtcccagatgggccaaaagatgaaat
gaaaattggagtgcggactgggtggtcatatattaagacttgaaagaatc
ctgggatgagagatactccca

gaattctctcttcagctctgtatcccatttttgtatttgggttatttggt
tattttggagtctaacttcttgagttctttgtagattttggatattagcc
ttctatcagatgaagatcttttcttaatctgtaggttgccattttgtcct
atagatagtgttctttaccttacagaagcttttcagtttcataaaatcct
atttgtgtatgaaaagttctaaaagtgttgtgattgttctccatggattt
ttccagctaaaatcagaaatcctgttagaaaaaaaaaagtcttggagagc
tgtgattgttttctagagatcttcaggcagcttaattctccctagattta
ttcacttgaatcatgttcaccatattccaaccatgcaaaaccacagtaac
tgaataccaacatctgtctactgtcctgtagacattgttttatacactac
ttcacagctcagtccagacacattgaagttgatagcctaccattgataaa
cacatttatccttttgggataccttgcaagaaattctttctgttgattgt
cttatttaacttgctcagtgtgaagtacagtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_67284570_67285181
seq2: B6Ng01-285N18.g_68_679

seq1  GAATTCTCTCTTCAGCTCTGTATCCCATTTTTGTATTTGGGTTATTTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTTCAGCTCTGTATCCCATTTTTGTATTTGGGTTATTTGGT  50

seq1  TATTTTGGAGTCTAACTTCTTGAGTTCTTTGTAGATTTTGGATATTAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGAGTCTAACTTCTTGAGTTCTTTGTAGATTTTGGATATTAGCC  100

seq1  TTCTATCAGATGAAGATCTTTTCTTAATCTGTAGGTTGCCATTTTGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCAGATGAAGATCTTTTCTTAATCTGTAGGTTGCCATTTTGTCCT  150

seq1  ATAGATAGTGTTCTTTACCTTACAGAAGCTTTTCAGTTTCATAAAATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGTGTTCTTTACCTTACAGAAGCTTTTCAGTTTCATAAAATCCT  200

seq1  ATTTGTGTATGAAAAGTTCTAAAAGTGTTGTGATTGTTCTCCATGGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTATGAAAAGTTCTAAAAGTGTTGTGATTGTTCTCCATGGATTT  250

seq1  TTCCAGCTAAAATCAGAAATCCTGTTAGAAAAAAAAAAGTCTTGGAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCTAAAATCAGAAATCCTGTTAGAAAAAAAAAAGTCTTGGAGAGC  300

seq1  TGTGATTGTTTTCTAGAGATCTTCAGGCAGCTTAATTCTCCCTAGATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTGTTTTCTAGAGATCTTCAGGCAGCTTAATTCTCCCTAGATTTA  350

seq1  TTCACTTGAATCATGTTCACCATATTCCAACCATGCAAAACCACAGTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTGAATCATGTTCACCATATTCCAACCATGCAAAACCACAGTAAC  400

seq1  TGAATACCAACATCTGTCTACTGTCCTGTAGACATTGTTTTATACACTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATACCAACATCTGTCTACTGTCCTGTAGACATTGTTTTATACACTAC  450

seq1  TTCACAGCTCAGTCCAGACACATTGAAGTTGATAGCCTACCATTGATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCTCAGTCCAGACACATTGAAGTTGATAGCCTACCATTGATAAA  500

seq1  CACATTTATCCTTTTGGGATACCTTGCAAGAAATTCTTTCTGTTGATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTATCCTTTTGGGATACCTTGCAAGAAATTCTTTCTGTTGATTGT  550

seq1  CTTATTTAACTTGCTCAGTGTGAAGTACAGTGTGTGTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTAACTTGCTCAGTGTGAAGTACAGTGTGTGTGTGTGTGTGTGTG  600

seq1  TGTGTGTGTGTG  612
      ||||||||||||
seq2  TGTGTGTGTGTG  612


| Home | SequenceCutter | Blast | Download |