BAC Information

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BAC

Clone NameB6Ng01-286H05
Chromosome12 (Build37)
Map Location 45,364,973 - 45,365,639
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039059, ENSMUSG00000066507, LOC100039081, LOC664854, Dnajb9, LOC100039062
Downstream genePnpla8, Nrcam, EG620025, Stxbp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286H05.bB6Ng01-286H05.g
ACCGA084643GA084644
length1,1911,121
definitionB6Ng01-286H05.b B6Ng01-286H05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgcttagcttcctttctccttttcactcagtctgaaacccca
agtgataggacggtactgcagacattcaggatggctcatccctctttatt
cagcccaatagagaaacctctcaaagacgtagttgagctttgtctcctaa
ggaattattctatgtcctgtcaagttgacaatcaatattaaatgtcacat
catatccacttatcttcaattcagttaatatactcccaagggcagattct
tcatatccctatcacctgcccaaagtacctgccctcaaatataatcagtg
caagactttagagatcaagtttctaatgtgtaaaattgggggagcacatt
caaatcatagcagacatcaaaaagtgaagagaggccaacaaggtgcctca
gtgagtaaagtcactgctaccaagcaaatgtaccatgcaaataaacagac
tctcatgtatttatccaattgagttgaaaacatgtcaccattaaaacaca
aatgtttgtagacactttcctcataattatcccaaactggaaggaaccca
gatatccttcagtatatgtctgccttagttaggttttctcatgctgtgat
aaaacaccatgaccaaagcaacttgccaaggaaaaggtttatttgactaa
catatcccaaatcacagttcagtgaagtgagccaaggcaggaattcaaat
caggcaggaatctgaaagaaggatctgacgcagaggcagaggagaaatgc
tgcttactggattactcctcattgcttgtatatcttgtttttcatacagc
gccaggcaccacaagctcaaggatgccatctataaaggactggccccttc
ccagtgactgatgaatccctaattaagaaaatcccacaaaggcttggcta
cagactgagcttattgagacattgtcttaactaaagttccttcttctcag
ttgactttacctgtgtcgagttgatataaaacttcatcatggaagaccat
ggggtggatacttcatttctctagatagggaacacatacccatgaaagga
gttacagagaacaagtgtgggagctaagacgaaagatgactatccaagaa
ctaccccacccgggatcaatccattatcaggccactgatccagacctatg
caatggcagaaagtttgcctgtagggggtcccgtgcataac

gaattctttgtttagacctgtaccctatttttttaattgggttatttggt
ttgttgagtccttttgactgtatcctttgccttttggaagcttttcagtt
gcatgaagtcccatttattaattgttgatgtgttggtgttctgtctggaa
agttttctcctgtgtcaatgcattcaaggctattctgccctttcttttct
atgagatttacagtatctagttttatgttgaggtcgttgatccacttgta
ctagaattttgtgcagtgtgatagatatggatctatttgcattcttctac
atgcagatatccagttagaccggtaccatttttctgaagatgcaccccct
gaccccctgcctaatgtatggttttggcttgtttgtcaaaactcaagtgt
cgataggtgtgtggatttacttctggttcttggattccattccattgatc
aagctatgtgtttttatgctagtaccatccagtttttattactattgctc
tgtagaacagcctgaaatcagggatggtgatacctccagaagttatttta
ttgtataggattagcggatgatatgacaaaagtgaccccaaaaattctac
ctgggaattcctacagctaataaatacctttagtaaagcgtctgtataca
aaattaactcaaaaaaaaaaatcagtagccctcatatataacaagtgata
aatgggccaagaaagaaattaggcaaacaataccctgacaatagtcccaa
ataacttgctctaaccaagcaagtgaaaaacccgatatgacaagaacttt
caaatctttgaagaaactaaagaaatcttcagaagatgcaaagatctccc
atgtgcatggatcagtaggattagtatagtaaaactggccatccaaccaa
aagcattctacagattcaatgcaattcctaccacatttccaacaccagat
cactttttatttgaccaaatatcttgacttcaggaaaaacagaccactac
tttctaccaaccctaacattaagaatgttgcaagtacattgaaaccttag
acagggaatttgtggattttcgataacgtgcctgttctgatgttctcaca
caataccattttaaagtgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_45364973_45365639
seq2: B6Ng01-286H05.g_521_1187

seq1  TATGTGTTTTTATGCTAGTACCATCCAGTTTTTATTACTATTGCTCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTTTTATGCTAGTACCATCCAGTTTTTATTACTATTGCTCTGTA  50

seq1  GAACAGCCTGAAATCAGGGATGGTGATACCTCCAGAAGTTATTTTATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGCCTGAAATCAGGGATGGTGATACCTCCAGAAGTTATTTTATTGT  100

seq1  ATAGGATTAGCGGATGATATGACAAAAGTGACCCCAAAAATTCTACCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTAGCGGATGATATGACAAAAGTGACCCCAAAAATTCTACCTGG  150

seq1  GAATTCCTACAGCTAATAAATACCTTTAGTAAAGCGTCTGTATACAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACAGCTAATAAATACCTTTAGTAAAGCGTCTGTATACAAAAT  200

seq1  TAACTCAAAAAAAAAAATCAGTAGCCCTCATATATAACAAGTGATAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAAAAAAAAAAATCAGTAGCCCTCATATATAACAAGTGATAAATG  250

seq1  GGCCAAGAAAGAAATTAGGCAAACAATACCCTGACAATAGTCCCAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGAAAGAAATTAGGCAAACAATACCCTGACAATAGTCCCAAATAA  300

seq1  CTTGCTCTAACCAAGCAAGTG-AAAACCCGATATGACAAGAAC-TTCAAA  348
      ||||||||||||||||||||| ||||||||||||||||||||| ||||||
seq2  CTTGCTCTAACCAAGCAAGTGAAAAACCCGATATGACAAGAACTTTCAAA  350

seq1  TCTTTGAAGAAACTAAAGAAATCTTCAGAAGATGCAAAGATCTCCCATGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAAGAAACTAAAGAAATCTTCAGAAGATGCAAAGATCTCCCATGT  400

seq1  GCATGGATCAGTAGGATTAGTATAGTAAAACTGGCCATCCAACCAAAAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGATCAGTAGGATTAGTATAGTAAAACTGGCCATCCAACCAAAAGC  450

seq1  ATTCTACAGATTCAATGCAATTCCTACCACAATTCCAACA-CAGATCACT  497
      ||||||||||||||||||||||||||||||| |||||||| |||||||| 
seq2  ATTCTACAGATTCAATGCAATTCCTACCACATTTCCAACACCAGATCAC-  499

seq1  TTTTTATTTGACCAAATATCTTTGACTTTCAGGAAAAACAGACCACTACT  547
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  TTTTTATTTGACCAAATATC-TTGAC-TTCAGGAAAAACAGACCACTACT  547

seq1  TTCTACCAACCCAAACATTAAGAATGTTGCAAAGTAACATTTGAAACTTA  597
      |||||||||||| ||||||||||||||||| |||| ||| ||||||| | 
seq2  TTCTACCAACCCTAACATTAAGAATGTTGC-AAGT-ACA-TTGAAACCTT  594

seq1  AGACAGGGATTTTGT-GATTTTCGATAACGTGCCTG-TCTGATGTTCTCA  645
      ||||||||| ||||| |||||||||||||||||||| |||||||||||||
seq2  AGACAGGGAATTTGTGGATTTTCGATAACGTGCCTGTTCTGATGTTCTCA  644

seq1  -ACAATA-CATTTTAAAGGTGCCT  667
       |||||| ||||||||| ||||||
seq2  CACAATACCATTTTAAA-GTGCCT  667


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