BAC Information

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BAC

Clone NameB6Ng01-286I20
Chromosome12 (Build37)
Map Location 13,276,512 - 13,276,593
singlet/doubletsinglet
Overlap genenone
Upstream geneD12Ertd553e, LOC100043215, Mycn, EG668473, LOC628449, Ddx1
Downstream geneLOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481, AW125753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286I20.bB6Ng01-286I20.g
ACCGA084721GA084722
length1,1931,028
definitionB6Ng01-286I20.b B6Ng01-286I20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaacacttttatcatgaatgggtgttggatcttg
tcaaatgctttttcttcatctagcgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaccctactttgtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatgatcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatc
tcttcaggatctgttgtcatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaattgcttcctttttttctagggc
ttttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttct
ggagcactcagagctatgagtttccctcttagaaatgctttcatgtgtcc
cataggttggggtacggtgtggcttcatttcataaactctaaaagtctta
ttcttctttattccctccttgaccaagaatcatgagagagtgttatcagt
ttccacgtgaatgtttgcccttcccattatagttgctaatggagaatctc
agctctaagccaatgtgttgcttgataggaatatacactgagt
gaattctaaaaacacgagttcaaaaatatatataagcaggatttctgaac
tatctataatatacaaatgcaatatgaattgtatgaggggcttcctggac
ctaaatgaacagaggcagctgcactatgagagagcttgtcagaaagatac
aaaggcaggcagatacacaggcaggcacagttcaaggccagcctggaaca
gggagaatttaggcccaggcatggtgggaagaatgatctcaaaaactgga
tcccacccagctagcttattgtctggtattacaaaggcaggcagatctct
aaattcatttacaatgttaagaaaaatgtgcttgtgaatttttcttagaa
gtcaaggggttaaagtaaaaatattattattagtatgataattaagaggg
acccttgggtgtatggttgaattgttatgtaaataaaagactggacttta
gtctgagagctgagctatccagtgcataaaactgtctctaacagaacata
ggctatgacttctagatgatctttttctcagtcccaaacacaccttctac
aaaacccctctccaagctgaggcttgtccttgtcacaagcctgtaaaaat
cctataaaaagtgatttacagatttagtgcaacctcattcaatagtcact
tgacattcttcacagaaataggaagcaaaacattctataactcttatgga
aacacagaagaaccttgatagccaaagaaacaatgaacaaaaatttcagt
gctggagtgattctcagtctacatttcaagacatgttactgagctatact
agtaaaaagagaatgatacacacacacacacacacacacacacacacaca
cactcacacacacacacactcacacacacacatgaacaccatctatctat
ctatctatctatctatctatctatctatctatctatctatctatcatcta
tctatctatctatctatctatctatctatctatctatctacatagatagt
atgagaagtagggcattcagagacagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13276512_13276593
seq2: B6Ng01-286I20.g_899_1093

seq1  ACACACACACACACACACACACACACACACACACACTCGGACCC------  44
      |||||||||||||||||||| |||||||||||||||||  || |      
seq2  ACACACACACACACACACACTCACACACACACACACTCACACACACACAT  50

seq1  --------------------------------------------------  44
                                                        
seq2  GAACACCATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATC  100

seq1  --------------------------------------------------  44
                                                        
seq2  TATCTATCTATCATCTATCTATCTATCTATCTATCTATCTATCTATCTAT  150

seq1  -------CAGATATGGTGCAGGCTGCTGGGCATTCAGAGACAGTG  82
             || | || ||    |  |  ||||||||||||||||||
seq2  CTATCTACATAGATAGTATGAGAAGTAGGGCATTCAGAGACAGTG  195