BAC Information

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BAC

Clone NameB6Ng01-287L14
Chromosome12 (Build37)
Map Location 100,219,217 - 100,220,277
singlet/doubletsinglet
Overlap geneTtc8
Upstream geneLOC667746, Galc, Gpr65, Kcnk10, Spata7, Ptpn21, Zc3h14, Eml5, LOC100039845
Downstream geneEG667779, Ches1, LOC100039892, 2610021K21Rik, Tdp1, LOC100040041, Kcnk13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287L14.bB6Ng01-287L14.g
ACCGA085569GA085570
length1,2041,055
definitionB6Ng01-287L14.b B6Ng01-287L14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcagatctccttgtaagaccttgttcacattttgttagatttg
taccccggtatactgtttgtccgtgtgtggtgacagctgacctggcatca
cattttgaagtacaaactgtacttggtctgtgctggtatataggagaaca
attgattcttgtctatcagtcttctgtccctagacctactataattactt
attagttccaggaagggttttattgtttgttttctaatccctttgaattt
tctacatagacaatgaagccatcaatgatcaaagacatgcttatgtcttc
cttcccccatctcttcattttctctcctagtcttgcagtatctgccagga
cttttagtatgatatttttaaaaagagcgatgagaagaaccacccttggt
cttcgtgggaaaacttctgggtcctccccattgagtgtgatgtcattaat
acttttttttttttcctgaagctgttctaaccaagtaaagagagcactcg
gtttctaatttgctgagagtcttcactgtaagtactgttggattttgtca
aacgcttacttagaaagtatgtgtgagagggacacatgtgtgtaagtgcc
cgcagaggctagaagctactggatcccatggagctggagttacaagcagt
tgtgagctgcccagtgtgggtactgaaaccaagctctggtcctcggaaag
tggagaaatgctcttcagtgttgaaccatctctccagcccttgctttttc
tgactctatcaatgtgatagagtgttataatgataacatggagtttatct
tctttgacatgttaatgtgatggacgacagtcattcatttttgttttgaa
ccagccttgcagacttgggattggttcctcttggttggggcatgtcattc
ttttaatacaatgttagattggacttgttatgtttgcttgagattttgaa
tctgtattcatgagtgatattggtaatacttttgggggttaatgtttcag
tcttgtttttggtgataccaattattacaattgagtatgagtagtcttct
ctgcttctaatgttggaaattcttatagtgaaattgcataatttggcctg
actcattctgttgaacttgcttattcaacggtattataggcctgtaaagt
tctatgattgacagacgtattattcagcattagttccatttatcaccgct
acta
gaattctctccaaaaccccagtgatgtttttcacttgagcctctctgaac
taggccctgtggcccgcatagaagatttagcaatgaatgaaatagacaaa
aacttgtacctcgtgatgcttgcattcgtatggaacctgagactcactga
ggttacaaggcatctgtagaagctgagaatggagatacaatctataaaac
cgtagacactagagactaaagcagagacactagttcaaagctagaccagt
aagaaccagtctcaaccaaacccaaacagcaggggtctttaggtgatggc
tcagtggctaagagcacatgcagctcttccaaagatccaggaatttggtt
cccagcatccacttcaggcagctcccagctgcctggaactccagctccag
gaaattctgtatctctgactctgacagcacctgtattcacatacacatat
ccacactcactcacacctacacataatgaaaaataataaaaagaaaacca
gtctgaaagaacaaaacaaagacacacgctagagccacactgcactctga
gctcccacactgctctccggctcccagggcaccttccatctcccactgct
ggcacgcttcaaatcacaaggaaagtcagtgtgctttaatgacttcagct
caaaggattcttataaggtaggtcaacaaactactgtaaaataataaagt
tgaaacgttaggattttaaaaggaaaccatttcaatctaaaatacataaa
tgctaatgaaaaatccatcagagttgaatgaatcacatagtttttttttt
tgcacacacactaataattttctgtcctttcagaagtatatacatgaatt
tttctttgggactggacttcaattacagagtttattaaacattagaggta
ttttttttttttttttgggtttttcagacaggatttctctgtgtagtcct
gggctgtcttggaacttgctttgtagaccagctgacctccaactcagaaa
tctgctgctctgcctccagtgctggataaagtcatgtgccacccacgcca
gcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_100219217_100220277
seq2: B6Ng01-287L14.g_65_1119

seq1  GAATTCTCTCCAAAACCCCAGTGATGTTTTTCACTTGAGCCTCTCTGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCAAAACCCCAGTGATGTTTTTCACTTGAGCCTCTCTGAAC  50

seq1  TAGGCCCTGTGGCCCGCATAGAAGATTTAGCAATGAATGAAATAGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCTGTGGCCCGCATAGAAGATTTAGCAATGAATGAAATAGACAAA  100

seq1  AACTTGTACCTCGTGATGCTTGCATTCGTATGGAACCTGAGACTCACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTACCTCGTGATGCTTGCATTCGTATGGAACCTGAGACTCACTGA  150

seq1  GGTTACAAGGCATCTGTAGAAGCTGAGAATGGAGATACAATCTATAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACAAGGCATCTGTAGAAGCTGAGAATGGAGATACAATCTATAAAAC  200

seq1  CGTAGACACTAGAGACTAAAGCAGAGACACTAGTTCAAAGCTAGACCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACACTAGAGACTAAAGCAGAGACACTAGTTCAAAGCTAGACCAGT  250

seq1  AAGAACCAGTCTCAACCAAACCCAAACAGCAGGGGTCTTTAGGTGATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCAGTCTCAACCAAACCCAAACAGCAGGGGTCTTTAGGTGATGGC  300

seq1  TCAGTGGCTAAGAGCACATGCAGCTCTTCCAAAGATCCAGGAATTTGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGCTAAGAGCACATGCAGCTCTTCCAAAGATCCAGGAATTTGGTT  350

seq1  CCCAGCATCCACTTCAGGCAGCTCCCAGCTGCCTGGAACTCCAGCTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCATCCACTTCAGGCAGCTCCCAGCTGCCTGGAACTCCAGCTCCAG  400

seq1  GAAATTCTGTATCTCTGACTCTGACAGCACCTGTATTCACATACACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTGTATCTCTGACTCTGACAGCACCTGTATTCACATACACATAT  450

seq1  CCACACTCACTCACACCTACACATAATGAAAAATAATAAAAAGAAAACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTCACTCACACCTACACATAATGAAAAATAATAAAAAGAAAACCA  500

seq1  GTCTGAAAGAACAAAACAAAGACACACGCTAGAGCCACACTGCACTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAAGAACAAAACAAAGACACACGCTAGAGCCACACTGCACTCTGA  550

seq1  GCTCCCACACTGCTCTCCGGCTCCCAGGGCACCTTCCATCTCCCACTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCACACTGCTCTCCGGCTCCCAGGGCACCTTCCATCTCCCACTGCT  600

seq1  GGCACGCTTCAAATCACAAGGAAAGTCAGTGTGCTTTAATGACTTCAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACGCTTCAAATCACAAGGAAAGTCAGTGTGCTTTAATGACTTCAGCT  650

seq1  CAAAGGATTCTTATAAGGTAGGTCAACAAACTACTGTAAAATAATAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATTCTTATAAGGTAGGTCAACAAACTACTGTAAAATAATAAAGT  700

seq1  TGAAACGTTAGGATTTTAAAAGGAAACCATTTCAATCTAAAATACATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACGTTAGGATTTTAAAAGGAAACCATTTCAATCTAAAATACATAAA  750

seq1  TGCTAATGAAAAATCCATCAGAGTTGAATGAATCACATAGTTTTTTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATGAAAAATCCATCAGAGTTGAATGAATCACATAGTTTTTTTTTT  800

seq1  TGCACACACACTAATAATTTTCTGTCCTTTCAGAAGTATATACATGAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACACACACTAATAATTTTCTGTCCTTTCAGAAGTATATACATGAATT  850

seq1  TTTCTTTGGGACTGGACTTCAATTACAGAGTTTATTAAACATTAGAGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGGGACTGGACTTCAATTACAGAGTTTATTAAACATTAGAGGTA  900

seq1  TTTTTTTTTTTTTTTTGGTTTTTCAAGACAGGGTTTCTCTGTGTAGTCCT  950
      |||||||||||||||||| ||||  ||||||| |||||||||||||||||
seq2  TTTTTTTTTTTTTTTTGGGTTTTTCAGACAGGATTTCTCTGTGTAGTCCT  950

seq1  -GGCTGTCTTGGAACTTGCTTTGTAGACCAGGCTGACCTCCAACTCAGAA  999
       ||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGGCTGTCTTGGAACTTGCTTTGTAGACCA-GCTGACCTCCAACTCAGAA  999

seq1  ATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGTCATGTGCCA-C  1048
      ||||| ||| ||||||||||  ||||||||   ||||||||||||||| |
seq2  ATCTG-CTG-CTCTGCCTCC--AGTGCTGG--ATAAAGTCATGTGCCACC  1043

seq1  CACGCCAGGCTTT  1061
      ||||||| |||||
seq2  CACGCCA-GCTTT  1055