BAC Information

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BAC

Clone NameB6Ng01-288N15
Chromosome12 (Build37)
Map Location 37,753,676 - 37,754,787
singlet/doubletsinglet
Overlap genenone
Upstream geneTspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik, LOC100043139, Dgkb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-288N15.bB6Ng01-288N15.g
ACCGA086408GA086409
length1,2031,187
definitionB6Ng01-288N15.b B6Ng01-288N15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaaggggtgttgtttccctaatttcttctcagcctgt
ttaattctttgtaatagaagaaaggccatttgacttgtttgagtttattt
tatatcaggctacttcaaccggaagctgttttatcagttaaggagttcct
ctggtaggaattttaaggtccacttatatatacctatccatgtcactctg
caaagtgaaattttggcaacggcaccgtatcgcagcatccgtgtgtagat
aac
gaattctcattacagatatgaatggcagcctacattacataattgtagaa
agaaggtgggttgtggtttaaggaggaactagagtattgaattatttatg
aaaagggtaatagaacaaaactttcctggtatatgtttttcattaggctc
agagaaagagcataattcggtatttactaagggacccctggaggtgggtt
aaacaatagcctagaagtacacctggtattagtattagccctttcacctg
gctcctgtgaataactgactttatatagggctgaccttatttcagttgta
aacactgtctggttctttctagcttttatgtatgtatttttctgttttgt
gttaagagcaattatgtatcttgatgtaccttgactgatgtattgcctaa
cttccttctttttcttctgtattattagtctgatgttcactttgagacat
tatattcagatatagcattttcttgtctgtcatgttttgctgactctttg
tccacttgagtactggaaccttgattctcccgcgggttgagggaccaact
gagtccaatctgtggcagttttcagagaaaaaaaaatgctaatattcaaa
gtgtcattgtatatgtatatcaaagaaaaaaaaatctcaggattaaatac
cctatccattctcaaaatctagcaggaattttagttgagtttgaaataca
tgaatgtttggttttttacctccatcaccatactatatttatcattaata
ttaaagttatgatattggcattcattttagttatcattatcagacattat
aagtgactattgatctaaaagttatccctggtcatctaagctacacattt
aaaataaattacctttgttcacatgtagggaactaagacttatacttgcc
cttttgttttctttacacgttttaataaggtctgagtttaccctcagttc
cagggaaagcccttcctccctcttgcatcctagctctcttctgtttattt
tcaacacaaatttttaatgctatttggctggcaagtgaatatgacttata
tcttatacatgaaggaattatgtaaaaggataagttataggactggatat
gggtggaacaattacttatattccataatctggaaggcaggggcagcaat
ctctgagataccagcctatccgtgttctatggtagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37753676_37754787
seq2: B6Ng01-288N15.g_135_1254

seq1  TTAAGGAGGAACTAGAGTATTGAATTATTTATGAAAAGGGTAATAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGAGGAACTAGAGTATTGAATTATTTATGAAAAGGGTAATAGAACA  50

seq1  AAACTTTCCTGGTATATGTTTTTCATTAGGCTCAGAGAAAGAGCATAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCCTGGTATATGTTTTTCATTAGGCTCAGAGAAAGAGCATAATT  100

seq1  CGGTATTTACTAAGGGACCCCTGGAGGTGGGTTAAACAATAGCCTAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTATTTACTAAGGGACCCCTGGAGGTGGGTTAAACAATAGCCTAGAAG  150

seq1  TACACCTGGTATTAGTATTAGCCCTTTCACCTGGCTCCTGTGAATAACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCTGGTATTAGTATTAGCCCTTTCACCTGGCTCCTGTGAATAACTG  200

seq1  ACTTTATATAGGGCTGACCTTATTTCAGTTGTAAACACTGTCTGGTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATATAGGGCTGACCTTATTTCAGTTGTAAACACTGTCTGGTTCTT  250

seq1  TCTAGCTTTTATGTATGTATTTTTCTGTTTTGTGTTAAGAGCAATTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTTTATGTATGTATTTTTCTGTTTTGTGTTAAGAGCAATTATGT  300

seq1  ATCTTGATGTACCTTGACTGATGTATTGCCTAACTTCCTTGTTTTTCTTC  350
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATCTTGATGTACCTTGACTGATGTATTGCCTAACTTCCTTCTTTTTCTTC  350

seq1  TGTATTATTAGTCTGATGTTCACTTTGAGACATTATATTCAGATATAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATTAGTCTGATGTTCACTTTGAGACATTATATTCAGATATAGCA  400

seq1  TTTTCTTGTCTGTCATGTTTTGCTGACTCTTTGTCCACTTGAGTACTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGTCTGTCATGTTTTGCTGACTCTTTGTCCACTTGAGTACTGGA  450

seq1  ACCTTGATTCTCCCGCGGGTTGAGGGACCAACTGAGTCCAATCTGTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGATTCTCCCGCGGGTTGAGGGACCAACTGAGTCCAATCTGTGGCA  500

seq1  GTTTTCAGAGAAAAAAAAATGCTAATATTCAAAGTGTCATTGTATATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGAGAAAAAAAAATGCTAATATTCAAAGTGTCATTGTATATGTA  550

seq1  TATCAAAGAAAAAAAAATCTCAGGATTAAATACCCTATCCATTCTCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGAAAAAAAAATCTCAGGATTAAATACCCTATCCATTCTCAAAA  600

seq1  TCTAGCAGGAATTTTAGTTGAGTTTGAAATACATGAATGTTTGGTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCAGGAATTTTAGTTGAGTTTGAAATACATGAATGTTTGGTTTTTT  650

seq1  ACCTCCATCACCATACTATATTTATCATTAATATTAAAGTTATGATATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATCACCATACTATATTTATCATTAATATTAAAGTTATGATATTG  700

seq1  GCATTCATTTTAGTTATCATTATCAGACATTATAAGTGACTATTGATCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCATTTTAGTTATCATTATCAGACATTATAAGTGACTATTGATCTA  750

seq1  AAAGTTATCCCTGGTCATCTAAGCTACACA-TTAAAATAAATTACCTTTG  799
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAGTTATCCCTGGTCATCTAAGCTACACATTTAAAATAAATTACCTTTG  800

seq1  TTCACATGTA-GGAACTAAGACTTATACTTGCCC-TTTGTTTTCTTTACA  847
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  TTCACATGTAGGGAACTAAGACTTATACTTGCCCTTTTGTTTTCTTTACA  850

seq1  CGTTTTAAT-AGGTCTGAGTTTACCCTCAGTTCCAGGGAAAGCCCTTCTT  896
      ||||||||| |||||||||||||||||||||||||||||||||||||| |
seq2  CGTTTTAATAAGGTCTGAGTTTACCCTCAGTTCCAGGGAAAGCCCTTCCT  900

seq1  CCCTCTTGCATCCTAGCTCTCTTCTGTTTATTTTCAACACAAAATTTTTA  946
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCTCTTGCATCCTAGCTCTCTTCTGTTTATTTTCAACAC-AAATTTTTA  949

seq1  ATGCTATTTGGCTGGCAGGTG-ATATGACTTAATATCTTATACATGAAGG  995
      ||||||||||||||||| ||| ||||||||| ||||||||||||||||||
seq2  ATGCTATTTGGCTGGCAAGTGAATATGACTT-ATATCTTATACATGAAGG  998

seq1  AA-TATGTAAAAGGGATAGTTATAGGACTGGATAT-GGTGG-ACCATTAC  1042
      || |||||||||||   |||||||||||||||||| ||||| || |||||
seq2  AATTATGTAAAAGGATAAGTTATAGGACTGGATATGGGTGGAACAATTAC  1048

seq1  TATAATCCCAATATCTGGGAGGCAGGGGCAGGCAAATCTCTGAGAT--CA  1090
      |   || |||  |||||| ||||||||||||   ||||||||||||  ||
seq2  TTATATTCCATAATCTGGAAGGCAGGGGCAG--CAATCTCTGAGATACCA  1096

seq1  AGCTATCC-TGTTCTAT-GTAGTT  1112
        |||||| |||||||| ||||||
seq2  GCCTATCCGTGTTCTATGGTAGTT  1120