BAC Information

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BAC

Clone NameB6Ng01-290N12
Chromosome12 (Build37)
Map Location 96,874,321 - 96,875,222
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC217786, LOC100039603
Downstream geneLOC667688, Flrt2, 1700019M22Rik, LOC100039664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290N12.bB6Ng01-290N12.g
ACCGA087883GA087884
length1,188903
definitionB6Ng01-290N12.b B6Ng01-290N12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacacacggct
ctcctcagagattactggcggcacacatgcgattgctcgcagcacgcacc
ggctttccacaaagctggaagcaatcccactaaaatcagggactagacat
ggctgttcactctctccctacctattcaacattgtacttgaagtcctagc
cagagcaattaaacaacaaaaggagatcaaggggatacaaattggaaagg
aagaagtcaaaatatcactctttgcagatgatatgatagtatatataagt
gaccctaaaaattccaccagagaactcctaagcctgataaacagcttcag
tgaagtagctggatataaacttaactcaaacaagtcattggcctttctct
acacaaagaataaacaggctgagaaagaagttagggaaacaacacccttc
tcaacagtcacaaataatataaaatacttggcgtgactctaactaaggaa
gtgaaagatctgtatgataagaacttcaagtctctgaagaaagaaattaa
agaagatctcagaagatggaaagatctcccatgctcatggattggcagga
tcaatatggtaaaaatggctatcttgccaaaagcaatctacagattcaat
gcaatccccatcaaaattctaactcaattcttcaacgaattagaaagggc
aatctgcaaattcatttggaataacaaaaaacctaggatagcaaaaactc
ttctcaaggataaaagaacctctggtggaatcaccatgcctgacctaaag
ctgtactacagagcaattgtgataaaaaactgaatgggtactggtatagt
gacagacaagtagaccaaatgggaatagaattgaagacccagaaatgaac
ccacacacctatggtcacttgatctttgacaaggatctaaaccatccagt
ggaaaaaagaacagcatttcacaaatggctgctgggcacaactggatgta
tcatgtagaagaattcgaaattgattcaattctatctctgtacctaaggt
caatctaagtgatccaggaactccataaaccagagaacactgaaacttat
aaaggagaaacgtaagggtaataaagtcccttctctca
gaattctctaaggattgaaacttgaaatgcatgtgtgcctgtttctgggc
cagttgagaaatgaaaacattcttaattatttcaagcccatatagtggtg
tagagggtaattaactgtgatatgcattttacacccaattagagggtatc
ttagcaccaagataattggagccagcagcacctaggaagtgcaatcaaac
aagtttatcatcacatcttattgtcctctgatcccatgaacttttacaat
ccccaagggatggctgaatgggaaaatgttgctcattattgaaactttat
taaggcctaaagccagatcaaggatttcctgtttgtttaaaattccctaa
ccttcactatggcttcatggtcttttgctcttttttaactaatggtttct
ttactattttgctaatgatttcttcactgcttttcagtactatatccatc
catttgttttggtagacagtaagttgtgaaattttcttggcaattgagac
agtctgttagcattgttttcttttcttgttaccagagaatgcagtgcaga
acatggggactaatctgtggtgctgagatttttcacacactaccatgtat
aggttctaagaactcaactcgagatgtgagcctatgagtgtgttccatag
ccctataccagtagaaacattgatgctcagatggctttccaggacttgtt
gactctacattttaagagttaaatgaacacccataagaattatcttttga
aaaatgtatgcaaggagtcagaaatccactaggacattattcataggtta
tttatctaaatggttttgatagtatcagacctatggtgatatatatagat
atatatgtatgtgcatacatatacaatatgtcatggataattgacaaaga
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_96874321_96875222
seq2: B6Ng01-290N12.g_68_970 (reverse)

seq1  TATTCTTTG-CTTTTATCCAT-ACATATCTTATATGTATGCACATACATA  48
      ||||||||| |  |||||||| ||||||  ||||||||||||||||||||
seq2  TATTCTTTGTCAATTATCCATGACATATTGTATATGTATGCACATACATA  50

seq1  TATATCTATATATATCACCATAGGTCTGATACTATCAAAACCATTTAGAT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTATATATATCACCATAGGTCTGATACTATCAAAACCATTTAGAT  100

seq1  AAATAACCTATGAATAATGTCCTAGTGGATTTCTTACTCCTTGCATACAT  148
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAATAACCTATGAATAATGTCCTAGTGGATTTCTGACTCCTTGCATACAT  150

seq1  TTTTCAAAAGATAATTCTTATGGGTGTTCATTTTAACTCTTAAAATGTAG  198
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTCAAAAGATAATTCTTATGGGTGTTCA-TTTAACTCTTAAAATGTAG  199

seq1  AGTCAACAAGTCCTGGAAAGCCATCTGAGCATCAATGTTTCTACTGGTAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAACAAGTCCTGGAAAGCCATCTGAGCATCAATGTTTCTACTGGTAT  249

seq1  AGGGCTATGGAACACACTCATAGGCTCACATCTCGAGTTGAGTTCTTAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTATGGAACACACTCATAGGCTCACATCTCGAGTTGAGTTCTTAGA  299

seq1  ACCTCTACATGGTAGTGTCTGAAAAATCTCAGCACCACAGATTAGTCCCC  348
      |||| ||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACCTATACATGGTAGTGTGTGAAAAATCTCAGCACCACAGATTAGTCCCC  349

seq1  ATGTTCTGCACTGCATTCTCTGGTAACAAGAAAAGAAAACAATGCTAACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGCACTGCATTCTCTGGTAACAAGAAAAGAAAACAATGCTAACA  399

seq1  GACTGTCTCAATTGCCAAGAAAATTTCACAACTTACTGTCTACCAAAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTCAATTGCCAAGAAAATTTCACAACTTACTGTCTACCAAAACA  449

seq1  AATGGATGGATATAGTACTGAAAAGCAGTGAAGAAATCATTAGCAAAATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATGGATATAGTACTGAAAAGCAGTGAAGAAATCATTAGCAAAATA  499

seq1  GTAAAGAAACCATTAGTTAAAAAAGAGCAAAAGACCATGAAGCCATAGTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAACCATTAGTTAAAAAAGAGCAAAAGACCATGAAGCCATAGTG  549

seq1  AAGGTTAGGGAATTTTAAACAAACAGGAAATCCTTGATCTGGCTTTAGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTAGGGAATTTTAAACAAACAGGAAATCCTTGATCTGGCTTTAGGC  599

seq1  CTTAATAAAGTTTCAATAATGAGCAACATTTTCCCATTCAGCCATCCCTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATAAAGTTTCAATAATGAGCAACATTTTCCCATTCAGCCATCCCTT  649

seq1  GGGGATTGTAAAAGTTCATGGGATCAGAGGACAATAAGATGTGATGATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTGTAAAAGTTCATGGGATCAGAGGACAATAAGATGTGATGATAA  699

seq1  ACTTGTTTGATTGCACTTCCTAGGTGCTGCTGGCTCCAATTATCTTGGTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTTGATTGCACTTCCTAGGTGCTGCTGGCTCCAATTATCTTGGTG  749

seq1  CTAAGATACCCTCTAATTGGGTGTAAAATGCATATCACAGTTAATTACCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATACCCTCTAATTGGGTGTAAAATGCATATCACAGTTAATTACCC  799

seq1  TCTACACCACTATATGGGCTTGAAATAATTAAGAATGTTTTCATTTCTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACCACTATATGGGCTTGAAATAATTAAGAATGTTTTCATTTCTCA  849

seq1  ACTGGCCCAGAAACAGGCACACATGCATTTCAAGTTTCAATCCTTAGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCCAGAAACAGGCACACATGCATTTCAAGTTTCAATCCTTAGAGA  899

seq1  ATTC  902
      ||||
seq2  ATTC  903