BAC Information

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BAC

Clone NameB6Ng01-291B05
Chromosome12 (Build37)
Map Location 33,320,309 - 33,321,367
singlet/doubletsinglet
Overlap genenone
Upstream geneDus4l, LOC100043081, Gpr22, Hbp1, Prkar2b, Pik3cg, 2010109K11Rik, LOC100043548
Downstream genePbef1, LOC100043553, 4933406C10Rik, Sypl, LOC100043109, 1110049B09Rik, Atxn7l4, Atxn7l1, 4930504H06Rik, Twistnb, LOC668801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291B05.bB6Ng01-291B05.g
ACCGA088059GA088060
length1,1951,068
definitionB6Ng01-291B05.b B6Ng01-291B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgtcaatacctaaacataataaaagcaatatacagcaaacca
gtagccaaaatcaaattaaatgcagagaaacttgaagcaatcccactaaa
attagggactagacaaggctgcccactttctccctacctattcaatacag
tacttgaagttctagccagagcaattcgacaacaaaaggacatcaaggga
aacaaattggaaaggaagaagtcaaaatatcactatttccagatgatatg
atagtatatataagtgaccccaaaaattccaccagagaactcctaaactg
atagacagcttcagtgcagtagctggatataaaattaactcaaataaatc
aattgcttttctctacacaaatgataaagggactgagaaagatattaggg
aaacaacacccttcacagtagtcacaaataatataaaataccttggtgtg
actccaactaaggaagtgaaagacctgtatgataagaatgtcaagtctct
caagaaaaaaattgaagaagatctcagaagatggaaagatctcccatgct
catggattggcaggattaatgtagtcaaaatggctatcctcccgaaagca
atctacagattcaatgcaatccccatcaatattccaactcaatttgtcac
tgagatagaaagggcaatttgtaaattcatctagaaaaataaaaaaccta
ggatagcaaaaactattctcaataataaaaaaacctcaccatgcctgaca
ttaagctgtactacagaggaattgtgataaaaactgcatggtactggtac
atcgacagacaaacacaactggcagttatcatatagaagaatgtgaattg
atccattcttatctccttgtacaaagctcaagtctaagtggatcaaagac
ctccacacaagaccagagacactgaaatttatagaggaggaagtggggaa
aagcctcaaagatacggacacagggaaaattcctaaacagaacagcatgg
ctgtgctgtaagatgagaattgacaatgggactcataaattgcaaagttt
ctatagcaaagaaactgtcatagacaaaaagccaccaccgattggggaaa
gaattttacatcctagtctggatagagccttaatattacagagctcagag
catgactcgtataataaccatcaacttaaaaatgtggagccctat
gaattctggcttccttctctttcaggttttatgattacttgttatttttg
tttgtactctttttcacaatgtctgaaaggatgggagaggtgggaggaaa
ggccaaggtaattgagtccacctagctgcctctgcagttaacagcatgcc
aattctaaaccctgggcttcattttaatctattctttcacacaaaacagc
atccagttgatatgtgcagaatcaggagcatagtcaccacagctgtcctt
tcatgtttatgaggtccacacttggggtatgagaattgcatctgttgaac
atggcttaggttttcttgatattattcccctttaaaaacccataaaacca
ttcacatagcatttttcttgtatcaggtattattaataatctggatgaat
taaagtatatgagcatatacatctaagtgatagaaaaatattactaatac
atcattatatataaggtgcttgatacttgagaatttgcacatctctgtat
gtggtggagggaaactaattctctgaggctaccaaaggatgtctgtatta
tacaaatgatatggaaattaacagtgactataataaactgatgaaagcaa
gttaggggaaaacagggcttattttggattgtagttccatgaggttagag
tctatattgatggggaaagcatgggagcaggggcaagaagcagagaggtc
acattttatccacacacagaaagagagataggatgggaagtcagtgaggc
tacaaaccctcaaaactcaccccccccccccccagtgatgtatttcccag
tggtgttaggaagtgatgaatctccacttcctgacagtttctgtaccccc
caaaaccatgtcaccagctaaagaccagctgttcaaatgcatgaacttag
aggggcatttctcataactataacagtcctgggtcatgccagcagtgtag
gtaacatgaataatcagaaatgaaagtgatcagagggtgcaaagccagga
aggagtttcatagtaaaccttagctttgggatgggcaacagcaactttac
catttgccttacatcgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_33320309_33321367
seq2: B6Ng01-291B05.g_66_1133 (reverse)

seq1  AACGTTGTAAGGCAAATGGTAA--GTGCTG-TGCCCATCCCAAGCTTAAG  47
      |||| |||||||||||||||||   ||||| ||||||||||||   ||||
seq2  AACGATGTAAGGCAAATGGTAAAGTTGCTGTTGCCCATCCCAAAGCTAAG  50

seq1  GTTTACTCTG-AACTCCCTCCTGGCTTTGCACCCTCTGATCACTTTCATT  96
      ||||||| || |||||| ||||||||||||||||||||||||||||||||
seq2  GTTTACTATGAAACTCCTTCCTGGCTTTGCACCCTCTGATCACTTTCATT  100

seq1  TCTGATTATTCATGTTACCTACACTGCTGGCATGACCCAGGACTGTTATA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTATTCATGTTACCTACACTGCTGGCATGACCCAGGACTGTTATA  150

seq1  G-TATGAG-AATGCCCCTCTAAGTTCATGCATTTGAACAGCTGGTCTTTA  194
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGAGAAATGCCCCTCTAAGTTCATGCATTTGAACAGCTGGTCTTTA  200

seq1  GCTGGTGACATGGTTTTGGGGGGTACAG-AACTGTCAGGAAGTGGAGATT  243
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCTGGTGACATGGTTTTGGGGGGTACAGAAACTGTCAGGAAGTGGAGATT  250

seq1  CATCACTTCCTAACACCACTGGGAAATACATCACT--GGGGGGGGGGGGT  291
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  CATCACTTCCTAACACCACTGGGAAATACATCACTGGGGGGGGGGGGGGT  300

seq1  GAGTTTTGAGGGTTTGTAGCCTCACTGACTTCCCATCCTATCTCTCTTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGAGGGTTTGTAGCCTCACTGACTTCCCATCCTATCTCTCTTTC  350

seq1  TGTGTGTGGATAAAATGTGACCTCTCTGCTTCTTGCCCCTGCTCCCATGC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGGATAAAATGTGACCTCTCTGCTTCTTGCCCCTGCTCCCATGC  400

seq1  TTTCCCCATCAATATAGACTCTAACCTCATGGAACTACAATCCAAAATAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCATCAATATAGACTCTAACCTCATGGAACTACAATCCAAAATAA  450

seq1  GCCCTGTTTTCCCCTAACTTGCTTTCATCAGTTTATTATAGTCACTGTTA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTTTTCCCCTAACTTGCTTTCATCAGTTTATTATAGTCACTGTTA  500

seq1  ATTTCCATATCATTTGTATAATACAGACATCCTTTGGTAGCCTCAGAGAA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATATCATTTGTATAATACAGACATCCTTTGGTAGCCTCAGAGAA  550

seq1  TTAGTTTCCCTCCACCACATACAGAGATGTGCAAATTCTCAAGTATCAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTCCCTCCACCACATACAGAGATGTGCAAATTCTCAAGTATCAAG  600

seq1  CACCTTATATATAATGATGTATTAGTAATATTTTTCTATCACTTAGATGT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTATATATAATGATGTATTAGTAATATTTTTCTATCACTTAGATGT  650

seq1  ATATGCTCATATACTTTAATTCATCCAGATTATTAATAATACCTGATACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTCATATACTTTAATTCATCCAGATTATTAATAATACCTGATACA  700

seq1  AGAAAAATGCTATGTGAATGGTTTTATGGGTTTTTAAAGGGGAATAATAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATGCTATGTGAATGGTTTTATGGGTTTTTAAAGGGGAATAATAT  750

seq1  CAAGAAAACCTAAGCCATGTTCAACAGATGCAATTCTCATACCCCAAGTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAACCTAAGCCATGTTCAACAGATGCAATTCTCATACCCCAAGTG  800

seq1  TGGACCTCATAAACATGAAAGGACAGCTGTGGTGACTATGCTCCTGATTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTCATAAACATGAAAGGACAGCTGTGGTGACTATGCTCCTGATTC  850

seq1  TGCACATATCAACTGGATGCTGTTTTGTGTGAAAGAATAGATTAAAATGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATATCAACTGGATGCTGTTTTGTGTGAAAGAATAGATTAAAATGA  900

seq1  AGCCCAGGGTTTAGAATTGGCATGCTGTTAACTGCAGAGGCAGCTAGGTG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAGGGTTTAGAATTGGCATGCTGTTAACTGCAGAGGCAGCTAGGTG  950

seq1  GACTCAATTACCTTGGCCTTTCCTCCCACCTCTCCCATCCTTTCAGACAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAATTACCTTGGCCTTTCCTCCCACCTCTCCCATCCTTTCAGACAT  1000

seq1  TGTGAAAAAGAGTACAAACAAAAATAACAAGTAATCATAAAACCTGAAAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAAAGAGTACAAACAAAAATAACAAGTAATCATAAAACCTGAAAG  1050

seq1  AGAAGGAAGCCAGAATTC  1059
      ||||||||||||||||||
seq2  AGAAGGAAGCCAGAATTC  1068