BAC Information

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BAC

Clone NameB6Ng01-291F06
Chromosome12 (Build37)
Map Location 41,182,096 - 41,183,203
singlet/doubletsinglet
Overlap geneDock4
Upstream geneLOC100043148, Arl4a, LOC100043606, Scin, Gm889, Ifrd1, EG629820, Zfp277
Downstream geneLOC638487, LOC100043157, LOC100043162, Lrrn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291F06.bB6Ng01-291F06.g
ACCGA088245GA088246
length1,108977
definitionB6Ng01-291F06.b B6Ng01-291F06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcattcgaaataaataaaaacatggaaccaaatcactacatc
tctgccagatttctggtagatatttttagggcaatgtccaatcgataatc
aaataaaaaatgaacaattagctgcttgatttataaaaatgttgcccagt
tagggggatatgactgctgaggtcacaaaggtaagggttcaaatatccca
aggaggttcttgttaagggccctccctgatacctttcctctctgcatagt
cacaagagactggaatgcattactcttcgtcgtcaaaagccccgtgtaaa
tgtcgtgctctccctttttcctcgccatgttgtcattcacccctttgcat
cagattcctgttttcagatttagtggttttccttcttcaagctaaaggat
gcaaatatgatcactagccaaggtaacctgagtcttaaacctcatcctaa
gccctaactaaggatggtgctaaaaataaaagcctggtgcatcccgtttt
caggtgtctgttcaaaggctggctgatgtggaagagctccaatccatcgc
tcccacttactggtcatcatgctgccgtgcccctgtttggggcaggtcat
ctcctaccccactgcagtgcccctgtttgggggcaggtcatctcctaccc
cactgcagtgcccctgtttgggggcacgtcatctcctaccccattgcttt
tttctctttcaccaacaggcacccaaaaaaggggcataagcttggttact
gtagcattttaaggccacctttataatcaatcactttcctcatgaagacc
acagttcatgtctcaatgacaaagtaggcatccatccccttcagactgct
ttcctctcccctcccacccactttcccatcccagttctttctggaaaggg
gtcattatctcagaaattaaaaattggggtagaaagagaattaccatgga
tgcctcaacagaaaggataccctccctgttgaatatgtctgctcaactca
agctggtgttgtgagagcctgactggtcctcctgtaaagctcccagtcac
cgagtctttgaaggcccctgcttagccaatgaaaggcagaaaacagcacc
accgcttg
gaattcctcactaaaatcatcttgttccccagtttttttagactttcaat
gactgcttctatttccttagagattataggtctattaatattattaattt
gatttagccttggtaaatgttgtctatcaatcaagaaaattggcccggca
gtggtggcacacacctttaatcccagcacttgagaggcagaggcaggcaa
atttctgagttcgaggtcagcttggtctacaaagtgagttccaggacaac
cagggctacacagagaaaccctgtctcaaaaaaaaaaaaaaattgaggga
agggtgtggagagccttttggggtgccacttggcaggaatctgactttgg
ccaaggacaaggaaacgggcttcaggcaggattctgacattagccatgac
aaggaagtaagctcaggcaggaatctgacattagggcatgataaggaagt
aagttttggcaagaatctaactttaggctgtaataggttaaggcaggaat
tttaatcttagggtggaacagaagaagtaggcttcaggcaggattttggg
ctcagacaaggaagtgggctcaagtattttgactattatgacaagccctt
ttaaacaactgtcacaggacttttcttactgccttgctagttccttattg
tactgcttgtccttaatacttgtatataattaaaatggtataaaaatcag
attgggaaaattaaattttgccttcagtctttagaattgactgaggtcat
gctacattattgtctaactgtcttttatctttttaatcctcactgcactg
gagaacctgtttgattgactgagcgggcttggtcagaagggccaattcaa
ttactggcccagcttgagacccatgtcatgagaaggggcccaccccctga
cactatttaatgggtatttctgctgtacttccagataggagcctagcatg
actgtcatcaagagaagattttcattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_41182096_41183203
seq2: B6Ng01-291F06.b_48_1155 (reverse)

seq1  CAAGCGGTGGTGCTGTTTTCTG-CTTTCTATTGCTAAGCAGGGTGCTTTC  49
      |||||||||||||||||||||| |||||  | ||||||||||| || |||
seq2  CAAGCGGTGGTGCTGTTTTCTGCCTTTCATTGGCTAAGCAGGG-GCCTTC  49

seq1  AAAGACTCGGTGACTGGGAGCTTTACAGGAGGACCAGTCAGGGCTTCTCA  99
      ||||||||||||||||||||||||||||||||||||||||||   |||||
seq2  AAAGACTCGGTGACTGGGAGCTTTACAGGAGGACCAGTCAGG--CTCTCA  97

seq1  C-ACACCAGCTTTGAGTTGAGCAGACATATTCAACAGGGAGGGTATCCTT  148
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAACACCAGC-TTGAGTTGAGCAGACATATTCAACAGGGAGGGTATCCTT  146

seq1  TCTGTTTGAGGCATCCATGGTAATTCTCTTTCTACCCCAATTTTTAATTT  198
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTG-TTGAGGCATCCATGGTAATTCTCTTTCTACCCCAATTTTTAATTT  195

seq1  CTGAGAT-ATGACCCC-TTCCAGAAAGAACTGGGATGGGAAAGTGGGTGG  246
      ||||||| |||||||| |||||||||||||||||||||||||||||||||
seq2  CTGAGATAATGACCCCTTTCCAGAAAGAACTGGGATGGGAAAGTGGGTGG  245

seq1  GAGGGGAGAGGAAAGCAGTCTGAAGGGGATGGATG-CTACTTTGTCATTG  295
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAGGGGAGAGGAAAGCAGTCTGAAGGGGATGGATGCCTACTTTGTCATTG  295

seq1  AGACATGAACTGTGGTCTTCATGAGGAAAGTGATTGATTATAAAGGTGGC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGAACTGTGGTCTTCATGAGGAAAGTGATTGATTATAAAGGTGGC  345

seq1  CTTAAAATGCTACAGTAACCAAGCTTATGCCCCTTTTTTGGGTGCCTGTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATGCTACAGTAACCAAGCTTATGCCCCTTTTTTGGGTGCCTGTT  395

seq1  GGTGAAAGAGAAAAAAGCAATGGGGTAGGAGATGACGTGCCCCCAAACAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAAGAGAAAAAAGCAATGGGGTAGGAGATGACGTGCCCCCAAACAG  445

seq1  GGGCACTGCAGTGGGGTAGGAGATGACCTGCCCCCAAACAGGGGCACTGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACTGCAGTGGGGTAGGAGATGACCTGCCCCCAAACAGGGGCACTGC  495

seq1  AGTGGGGTAGGAGATGACCTGCCCCAAACAGGGGCACGGCAGCATGATGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGTAGGAGATGACCTGCCCCAAACAGGGGCACGGCAGCATGATGA  545

seq1  CCAGTAAGTGGGAGCGATGGATTGGAGCTCTTCCACATCAGCCAGCCTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAGTGGGAGCGATGGATTGGAGCTCTTCCACATCAGCCAGCCTTT  595

seq1  GAACAGACACCTGAAAACGGGATGCACCAGGCTTTTATTTTTAGCACCAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGACACCTGAAAACGGGATGCACCAGGCTTTTATTTTTAGCACCAT  645

seq1  CCTTAGTTAGGGCTTAGGATGAGGTTTAAGACTCAGGTTACCTTGGCTAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTTAGGGCTTAGGATGAGGTTTAAGACTCAGGTTACCTTGGCTAG  695

seq1  TGATCATATTTGCATCCTTTAGCTTGAAGAAGGAAAACCACTAAATCTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATATTTGCATCCTTTAGCTTGAAGAAGGAAAACCACTAAATCTGA  745

seq1  AAACAGGAATCTGATGCAAAGGGGTGAATGACAACATGGCGAGGAAAAAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGAATCTGATGCAAAGGGGTGAATGACAACATGGCGAGGAAAAAG  795

seq1  GGAGAGCACGACATTTACACGGGGCTTTTGACGACGAAGAGTAATGCATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCACGACATTTACACGGGGCTTTTGACGACGAAGAGTAATGCATT  845

seq1  CCAGTCTCTTGTGACTATGCAGAGAGGAAAGGTATCAGGGAGGGCCCTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTCTTGTGACTATGCAGAGAGGAAAGGTATCAGGGAGGGCCCTTA  895

seq1  ACAAGAACCTCCTTGGGATATTTGAACCCTTACCTTTGTGACCTCAGCAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAACCTCCTTGGGATATTTGAACCCTTACCTTTGTGACCTCAGCAG  945

seq1  TCATATCCCCCTAACTGGGCAACATTTTTATAAATCAAGCAGCTAATTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCCCCCTAACTGGGCAACATTTTTATAAATCAAGCAGCTAATTGT  995

seq1  TCATTTTTTATTTGATTATCGATTGGACATTGCCCTAAAAATATCTACCA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTTATTTGATTATCGATTGGACATTGCCCTAAAAATATCTACCA  1045

seq1  GAAATCTGGCAGAGATGTAGTGATTTGGTTCCATGTTTTTATTTATTTCG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTGGCAGAGATGTAGTGATTTGGTTCCATGTTTTTATTTATTTCG  1095

seq1  AATGAAAGAATTC  1108
      |||||||||||||
seq2  AATGAAAGAATTC  1108