BAC Information

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BAC

Clone NameB6Ng01-291H01
Chromosome12 (Build37)
Map Location 15,148,715 - 15,292,305
singlet/doubletdoublet
Overlap genenone
Upstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492, LOC100042426
Downstream geneLOC217409, Trib2, LOC100043268, EG432636, LOC100043273
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291H01.bB6Ng01-291H01.g
ACCGA088323GA088324
length1,110663
definitionB6Ng01-291H01.b B6Ng01-291H01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,291,191 - 15,292,305)(15,148,715 - 15,149,314)
sequence
gaattcactcattgatgattactacaaatggccaacatgcttcttggctt
tggagagatgttggaagtttagaggaatcctggaaaatttacactagaat
gtcagagacccttgattctagggtaaagtgtttttttactcctaatattt
tttttaacctctctgacctctcaaatgctcctgggtagtgtgcaaagttg
atttcacgtcaccgtagcactgttttctagttagttcttccctcttcttc
ttgatagttactgtgaatgactaatgtatctttattagaacactatcatc
tgaattccagagtttatactttgcatcttctgtatctcaggtacagacaa
tacatagacccaagataaagcactgcttattggatgtagatttaatgtag
aagacagctttttcagagtagctgtgaaagagaaacatcacaaaataaaa
tattgtaagttatagtgttattttcttgttaaagaatatggcaaagaacc
tcacatttgttttcaaggataaagaagaaacctctagacagggaatatgt
ggtataaattccaagcaaactaaaggtgaataaaggtagattttagaata
acatttttttttaattttgaaactttagcattctactagttaatgttctc
cacagaacattgggacaatatgtatgcatctgtagcacatgtatgctcaa
gtgattgtggtgcctagcaagtccaaaatcttctgagtgaacattaaatg
tcaagagaaatggtggtaaacttctgaaacacaggtggcattttcatcct
gagggtcactagacagatactttgtataatggacagtcattttgtttaat
ccagggcttctgttaactgcatacattccatccacatgagaagtgaccat
ctgtctactgacttagatgtcaactttttagaatcctcttttaaatgcgc
aaaataatgaccacttctctgcaccaatcaatgtagcagccagttgacac
atacattgaccacctctagaaatggacaaataatcattttcctccctatt
tcctacaaatgctatgaaagagttagaattatttgtagccaactagacaa
gactaaaatg

gaattcctataagaggtaatagtctgaaataatgttcatattgaattttg
tattttgagagacttaaaattcaaaataagactaaaaaatgatgagacac
aaaatcttatggtaaaagagaaaggttcaaacctgattcagattcattct
ctgagctcactaataagtcaagagggcatgtccgtattaaaagacagcaa
aattaaatagcaaagacagagtacctggtgttcactgatcatagtaaatg
acagaagatgataataaaacatgaaaaaaatgatataactacactattct
gttcattagcttcaacatgcctgttactcacttggtttaatatctctgaa
aaataagttagttgaacttgatatactttattgattccaacagttttact
attacaaatctttcttgggaggaatgatctaatgctttcatatgtatata
tatatatatatatatatatatatatatatatatatatatatatatatata
tatgtatatatatatccagaaagagatggatatgtatatgtgtgtgtgtg
tgtgtagagaatggagtgtaagtatctctttctttctatatatatatata
tgtgtgtgtgtgtgagggggaggcgcgcgcgcacacacacatgtacgtgt
gtgtgtgtgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_15291191_15292305
seq2: B6Ng01-291H01.b_44_1153 (reverse)

seq1  CATTTTAGTTCTTGTCCTAGTTTGCCTACAAATAATCCTAACTCCTTTCC  50
      |||||||| |||||| |||| ||| ||||||||||| |||||||  || |
seq2  CATTTTAG-TCTTGT-CTAG-TTGGCTACAAATAATTCTAACTC--TTTC  45

seq1  ATAGCATTTGTA-GAAATAGGGAGAAAATTGATTTATTTGTCCATTTCTA  99
      |||||||||||| ||||||||||| ||| ||| |||||||||||||||||
seq2  ATAGCATTTGTAGGAAATAGGGAGGAAAATGA-TTATTTGTCCATTTCTA  94

seq1  GA-GTGGTCAATTGTATGTGTCAACTTGGCTGCTACA-TGATGGGTGCAG  147
      || |||||||| ||||||||||||| ||||||||||| |||| |||||||
seq2  GAGGTGGTCAA-TGTATGTGTCAAC-TGGCTGCTACATTGATTGGTGCAG  142

seq1  AGAAGTGGTCATTA-TTTGCGCATTT-AAAGAGGATTCTTAAAAAGTTGA  195
      |||||||||||||| ||||||||||| ||||||||||| |||||||||||
seq2  AGAAGTGGTCATTATTTTGCGCATTTAAAAGAGGATTC-TAAAAAGTTGA  191

seq1  CATCTAAGTCAGTAGACAGATGGTCACTTCTCATGTGGATGGAATGTATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGTCAGTAGACAGATGGTCACTTCTCATGTGGATGGAATGTATG  241

seq1  CAGTTAACAGAAGCCCTGGATTAAACAAAATGACTGTCCATTATACAAAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAACAGAAGCCCTGGATTAAACAAAATGACTGTCCATTATACAAAG  291

seq1  TATCTGTCTAGTGACCCTCAGGATGAAAATGCCACCTGTGTTTTCAGAAG  345
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATCTGTCTAGTGACCCTCAGGATGAAAATGCCACCTGTG-TTTCAGAAG  340

seq1  TTTACCACCATTTCTCTTGACATTTAATGTTCACTCAGAAGATTTTGGAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCACCATTTCTCTTGACATTTAATGTTCACTCAGAAGATTTTGGAC  390

seq1  TTGCTAGGCACCACAATCACTTGAGCATACATGTGCTACAGATGCATACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGGCACCACAATCACTTGAGCATACATGTGCTACAGATGCATACA  440

seq1  TATTGTCCCAATGTTCTGTGGAGAACATTAACTAGTAGAATGCTAAAGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCCCAATGTTCTGTGGAGAACATTAACTAGTAGAATGCTAAAGTT  490

seq1  TCAAAATTAAAAAAAAATGTTATTCTAAAATCTACCTTTATTCACCTTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATTAAAAAAAAATGTTATTCTAAAATCTACCTTTATTCACCTTTA  540

seq1  GTTTGCTTGGAATTTATACCACATATTCCCTGTCTAGAGGTTTCTTCTTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGGAATTTATACCACATATTCCCTGTCTAGAGGTTTCTTCTTT  590

seq1  ATCCTTGAAAACAAATGTGAGGTTCTTTGCCATATTCTTTAACAAGAAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGAAAACAAATGTGAGGTTCTTTGCCATATTCTTTAACAAGAAAA  640

seq1  TAACACTATAACTTACAATATTTTATTTTGTGATGTTTCTCTTTCACAGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTATAACTTACAATATTTTATTTTGTGATGTTTCTCTTTCACAGC  690

seq1  TACTCTGAAAAAGCTGTCTTCTACATTAAATCTACATCCAATAAGCAGTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGAAAAAGCTGTCTTCTACATTAAATCTACATCCAATAAGCAGTG  740

seq1  CTTTATCTTGGGTCTATGTATTGTCTGTACCTGAGATACAGAAGATGCAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCTTGGGTCTATGTATTGTCTGTACCTGAGATACAGAAGATGCAA  790

seq1  AGTATAAACTCTGGAATTCAGATGATAGTGTTCTAATAAAGATACATTAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAACTCTGGAATTCAGATGATAGTGTTCTAATAAAGATACATTAG  840

seq1  TCATTCACAGTAACTATCAAGAAGAAGAGGGAAGAACTAACTAGAAAACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCACAGTAACTATCAAGAAGAAGAGGGAAGAACTAACTAGAAAACA  890

seq1  GTGCTACGGTGACGTGAAATCAACTTTGCACACTACCCAGGAGCATTTGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTACGGTGACGTGAAATCAACTTTGCACACTACCCAGGAGCATTTGA  940

seq1  GAGGTCAGAGAGGTTAAAAAAAATATTAGGAGTAAAAAAACACTTTACCC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGAGAGGTTAAAAAAAATATTAGGAGTAAAAAAACACTTTACCC  990

seq1  TAGAATCAAGGGTCTCTGACATTCTAGTGTAAATTTTCCAGGATTCCTCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCAAGGGTCTCTGACATTCTAGTGTAAATTTTCCAGGATTCCTCT  1040

seq1  AAACTTCCAACATCTCTCCAAAGCCAAGAAGCATGTTGGCCATTTGTAGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCAACATCTCTCCAAAGCCAAGAAGCATGTTGGCCATTTGTAGT  1090

seq1  AATCATCAATGAGTGAATTC  1115
      ||||||||||||||||||||
seq2  AATCATCAATGAGTGAATTC  1110


seq1: chr12_15148715_15149314
seq2: B6Ng01-291H01.g_66_728

seq1  GAATTCCTATAAGAGGTAATAGTCTGAAATAATGTTCATATTGAATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATAAGAGGTAATAGTCTGAAATAATGTTCATATTGAATTTTG  50

seq1  TATTTTGAGAGACTTAAAATTCAAAATAAGACTAAAAAATGATGAGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAGAGACTTAAAATTCAAAATAAGACTAAAAAATGATGAGACAC  100

seq1  AAAATCTTATGGTAAAAGAGAAAGGTTCAAACCTGATTCAGATTCATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTATGGTAAAAGAGAAAGGTTCAAACCTGATTCAGATTCATTCT  150

seq1  CTGAGCTCACTAATAAGTCAAGAGGGCATGTCCGTATTAAAAGACAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCACTAATAAGTCAAGAGGGCATGTCCGTATTAAAAGACAGCAA  200

seq1  AATTAAATAGCAAAGACAGAGTACCTGGTGTTCACTGATCATAGTAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATAGCAAAGACAGAGTACCTGGTGTTCACTGATCATAGTAAATG  250

seq1  ACAGAAGATGATAATAAAACATGAAAAAAATGATATAACTACACTATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGATGATAATAAAACATGAAAAAAATGATATAACTACACTATTCT  300

seq1  GTTCATTAGCTTCAACATGCCTGTTACTCACTTGGTTTAATATCTCTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTAGCTTCAACATGCCTGTTACTCACTTGGTTTAATATCTCTGAA  350

seq1  AAATAAGTTAGTTGAACTTGATATACTTTATTGATTCCAACAGTTTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTTAGTTGAACTTGATATACTTTATTGATTCCAACAGTTTTACT  400

seq1  ATTACAAATCTTTCTTGGGAGGAATGATCTAATGCTTTCATATGTATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAAATCTTTCTTGGGAGGAATGATCTAATGCTTTCATATGTATATA  450

seq1  TATATATATATATATATATATATATATATATATATATATATGAAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||| | ||||||
seq2  TATATATATATATATATATATATATATATATATATATATAT-ATATATAT  499

seq1  ACATG-AAATATATA-CATGAAATATATATATATATATATGCAATCCAAA  548
      | ||| | ||||||| |  |||| | ||  |||| ||||||   |     
seq2  ATATGTATATATATATCCAGAAAGAGATGGATATGTATATG-TGTGTGTG  548

seq1  AGAG-GCAGACAAGGCAG----ATAAACACTAACTTTGTATA--------  585
       | | | ||| || | ||    |  | | ||  |||| ||||        
seq2  TGTGTGTAGAGAATGGAGTGTAAGTATCTCTTTCTTTCTATATATATATA  598

seq1  -ATGTGTGTGTGTGTT----------------------------------  600
       ||||||||||||||                                   
seq2  TATGTGTGTGTGTGTGAGGGGGAGGCGCGCGCGCACACACACATGTACGT  648

seq1  ---------------  600
                     
seq2  GTGTGTGTGTGTGTT  663


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