BAC Information

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BAC

Clone NameB6Ng01-292F13
Chromosome12 (Build37)
Map Location 105,186,659 - 105,187,799
singlet/doubletsinglet
Overlap geneSerpina1e
Upstream gene9030205A07Rik, LOC667269, Prima1, EG544888, Asb2, Otub2, Ddx24, D12Ertd647e, Ifi27, 1810023F06Rik, 8430415E04Rik, Serpina10, Serpina6, Gm46, Serpina1f, EG435316, Serpina1b, Serpina1d, LOC667951, LOC628801, Serpina1a, LOC667954, Serpina1c
Downstream geneSerpina11, Serpina9, Serpina12, Serpina4-ps1, Serpina5, Serpina3a, Serpina3b, Serpina3c, LOC435318, LOC628883, Serpina3f, LOC667997, Serpina3g, Serpina3h, EG628900, EG238395, Serpina3k, EG628916, Serpina3m, Serpina3n, Gsc, Dicer1, Clmn, 4831426I19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292F13.bB6Ng01-292F13.g
ACCGA089011GA089012
length1,1401,152
definitionB6Ng01-292F13.b B6Ng01-292F13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatttataaccccaagtcacctttctataagtatataacaatta
tgtaagatattttctaggcaccacgaggatggtagctctcagcttctgtg
gtctggaaagtctaagccctccttgagtcctgagttaccctcaccaaagt
gcctgggcagcctagaaggctagtagtgtccccccccaccccttgccccg
tgcacaggaaaagtcaatgggctgtgtcaccacctcattgtctaaggtct
gctctcactctcccctcttcaggcaaatggaagaagccattcgatcctga
gaacactaagcaagctgagttccacgtggacgagtccaccacggtgaagg
tgcccatgatgaccctctcgggcatgcttgacgtgcaccattgcagcacg
ctctccagctgggtgctgctgatggattacgcgggcaacgccactgctgt
cttcctcctgcccgatgatgggaagatgcagcatctggagcaaactctca
acaaggagctcatctctaagttcctgctaaacaggcgcagaaggtgacgc
ccagaccgagaccttccctgagtgtaccaaaggacagaaagtgcttgcag
agggtggactctaatccaaggccacagctaagtttttaggccagaaatag
agctctctgggcaagtatgcagggcaaggctctgttcctgtcagtcctcc
gtgttgctgctaggtctccaggacccagctgtcctagagcgtgctccaca
gatcagaggacctgtgcactctgaattccgggctcttctcctgtgagaaa
ccatgagctacatggaacttctggcagtcttgaggttaagtgtgttaaat
ccagaggttgtatcccttccttcccggccaggcctctgattaggtctaaa
accaataaaagtgcagaagaagcagataaggctaagaccagagtgggtcc
agatcctgaggctggtcagatccttattgggcccttctctttccctgtag
tttagctttcagccctatggagggttgagggaacgtcacctccagctgta
ctgaccctagctccctgagagatcagatccaaagggggatccctgctcta
gaggaggatgaccaaacacatcaggtcatagtgagcttgg
gaattctttgtttagctctgagccccatttttaaatggtgttatttgcgg
tttctcaaataattggacatagtactactgaaggatcccacaatacctct
cctgggcatatatccagaagatgttaaaactggtaataaagacacattct
ccactatgttcatagcagccttattcgtaatagccagaaactgaaaagaa
cacagatgcccctcaacagaggaatggatacaaaaaaatgtggtatgata
agaacttcaagtctctgaagaaagaaatttaagaagatctcagaagatgg
aaagatctcccatgctcatggattggcaggatcaacattataaaaatggc
tatcttgccaaaagcaatctacagattcaatgcaatccccatcaaatacc
aactaaattcttcaatgaattagaaagagcaatctgcaaattaacctgga
ataacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaacc
tctggtggaatcaccatccctgacctaaagctttactacagagcaattgt
gataaaaaactgcatggtactggtatagtgacagacaattagaccaatgg
aatagaattgaagacccagaaatgaacccacacacctatggccacttgat
cttcgacaagggagctaaaaccatccagtggaagaaagacagcactttca
acaaatggtgctggcacaactggttgttatcatgtagaggatgcaaatcg
atccattcctatctccttgtactaaggtcaaatctaagtggatcaaggaa
cttcacataaaaccagagacactgaaatttatagagaagaaagtggggaa
aagcctcgaaagatatgggcatagggggaaaaattcctgaatagaacagc
aatggcttgtgctgtaagatcgagaatcgacaaatggggaactcatgaac
tacaagcttctgtaaggcaaaagaatactgggcaaataagaacaaaaaag
aaccacccaccagaattggaaggatcttttaccaattccttaattcagta
ggggaactaatatccaataagttaaaagacctgagagggtgacctccaga
aatcagtagccaattaaaaattggggctcagaaacttggacaaaggcaac
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_105186659_105187799
seq2: B6Ng01-292F13.b_47_1186 (reverse)

seq1  CCAAGCCTCACTATGACCTGATGTGTTTGGTCAATCCCTCCTCTAGAGCA  50
      ||||| |||||||||||||||||||||||||||   ||||||||||||| 
seq2  CCAAG-CTCACTATGACCTGATGTGTTTGGTCA--TCCTCCTCTAGAGC-  46

seq1  AGGGATCCCCC-TTGGATCTGATTCTCTCAAGGGAGCTAGGGTCAGTACA  99
      ||||||||||| |||||||||| |||||| ||||||||||||||||||||
seq2  AGGGATCCCCCTTTGGATCTGA-TCTCTC-AGGGAGCTAGGGTCAGTACA  94

seq1  GCTG--AGTGACGTTCCCCTCACCCT-CATAGGGCTGAAAGCTAAACTAC  146
      ||||   |||||||||||   ||||| |||||||||||||||||||||||
seq2  GCTGGAGGTGACGTTCCCTCAACCCTCCATAGGGCTGAAAGCTAAACTAC  144

seq1  AGGGAAAGAGAAGGGCCCAAT-AGGATCTGACCAGCCCTCAGGATCTTGG  195
      ||||||||||||||||||||| ||||||||||||| |||||||||| |||
seq2  AGGGAAAGAGAAGGGCCCAATAAGGATCTGACCAG-CCTCAGGATC-TGG  192

seq1  ACCCACTCTGGTCTTAGCCTTATCTGCTTC-TCTGCACTTTTATTGGTTT  244
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACCCACTCTGGTCTTAGCCTTATCTGCTTCTTCTGCACTTTTATTGGTTT  242

seq1  TAGACCTAATCAGAGGCCTGGCCGGGAAGGAA-GGATACAACCTCTGGAT  293
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGACCTAATCAGAGGCCTGGCCGGGAAGGAAGGGATACAACCTCTGGAT  292

seq1  TTAACACACTTAACCTCAAGACTGCCAGAAGTTCCATGTAGCTCATGGTT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACACACTTAACCTCAAGACTGCCAGAAGTTCCATGTAGCTCATGGTT  342

seq1  TCTCACAGGAGAAGAGCCCGGAATTCAGAGTGCACAGGTCCTCTGATCTG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACAGGAGAAGAGCCCGGAATTCAGAGTGCACAGGTCCTCTGATCTG  392

seq1  TGGAGCACGCTCTAGGACAGCTGGGTCCTGGAGACCTAGCAGCAACACGG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCACGCTCTAGGACAGCTGGGTCCTGGAGACCTAGCAGCAACACGG  442

seq1  AGGACTGACAGGAACAGAGCCTTGCCCTGCATACTTGCCCAGAGAGCTCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGACAGGAACAGAGCCTTGCCCTGCATACTTGCCCAGAGAGCTCT  492

seq1  ATTTCTGGCCTAAAAACTTAGCTGTGGCCTTGGATTAGAGTCCACCCTCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGCCTAAAAACTTAGCTGTGGCCTTGGATTAGAGTCCACCCTCT  542

seq1  GCAAGCACTTTCTGTCCTTTGGTACACTCAGGGAAGGTCTCGGTCTGGGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCACTTTCTGTCCTTTGGTACACTCAGGGAAGGTCTCGGTCTGGGC  592

seq1  GTCACCTTCTGCGCCTGTTTAGCAGGAACTTAGAGATGAGCTCCTTGTTG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTTCTGCGCCTGTTTAGCAGGAACTTAGAGATGAGCTCCTTGTTG  642

seq1  AGAGTTTGCTCCAGATGCTGCATCTTCCCATCATCGGGCAGGAGGAAGAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGCTCCAGATGCTGCATCTTCCCATCATCGGGCAGGAGGAAGAC  692

seq1  AGCAGTGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTGGAGAGCG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGCGTTGCCCGCGTAATCCATCAGCAGCACCCAGCTGGAGAGCG  742

seq1  TGCTGCAATGGTGCACGTCAAGCATGCCCGAGAGGGTCATCATGGGCACC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAATGGTGCACGTCAAGCATGCCCGAGAGGGTCATCATGGGCACC  792

seq1  TTCACCGTGGTGGACTCGTCCACGTGGAACTCAGCTTGCTTAGTGTTCTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCGTGGTGGACTCGTCCACGTGGAACTCAGCTTGCTTAGTGTTCTC  842

seq1  AGGATCGAATGGCTTCTTCCATTTGCCTGAAGAGGGGAGAGTGAGAGCAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCGAATGGCTTCTTCCATTTGCCTGAAGAGGGGAGAGTGAGAGCAG  892

seq1  ACCTTAGACAATGAGGTGGTGACACAGCCCATTGACTTTTCCTGTGCACG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAGACAATGAGGTGGTGACACAGCCCATTGACTTTTCCTGTGCACG  942

seq1  GGGCAAGGGGTGGGGGGGGACACTACTAGCCTTCTAGGCTGCCCAGGCAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGGGGTGGGGGGGGACACTACTAGCCTTCTAGGCTGCCCAGGCAC  992

seq1  TTTGGTGAGGGTAACTCAGGACTCAAGGAGGGCTTAGACTTTCCAGACCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGAGGGTAACTCAGGACTCAAGGAGGGCTTAGACTTTCCAGACCA  1042

seq1  CAGAAGCTGAGAGCTACCATCCTCGTGGTGCCTAGAAAATATCTTACATA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTGAGAGCTACCATCCTCGTGGTGCCTAGAAAATATCTTACATA  1092

seq1  ATTGTTATATACTTATAGAAAGGTGACTTGGGGTTATAAATAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTATATACTTATAGAAAGGTGACTTGGGGTTATAAATAGAATTC  1140