BAC Information

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BAC

Clone NameB6Ng01-294C08
Chromosome12 (Build37)
Map Location 37,519,892 - 37,521,000
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC669866, Agr3, Agr2, Tspan13, EG432649, Bzw2, Ankmy2, 1700108M19Rik, Sostdc1, 4930579E17Rik, LOC638858
Downstream geneMeox2, A530016O06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-294C08.bB6Ng01-294C08.g
ACCGA090349GA090350
length1,1921,099
definitionB6Ng01-294C08.b B6Ng01-294C08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttggtagattttacctttaatgagtatgaagtgtccctcct
tggcttttttgataacttagggttggaagtcaattttattccatattaga
atggctactctagtttgtttctttagaccatttgcttggaaaattgtttt
ccagctttttactctgagatagtgtctgtctttatccctgaggtgggttc
cctgtaagcagcaaaatgttgggtcctggttgtgtagccagtttcttaat
ctatgtctttttattggggatttgagttcgttgatgttaagagaaattag
agaaaagtaattgttgtttcctgtcatttttgttgttaaagttggcattc
tgttcttgtggttgttttcttttagttttgttgaaggattactttcttgc
tttttctagggtgtaatttccatctttgtgttggtgttttccctttatta
tcttttgaaggcctgaattcgtggaaagatttgtaaatttggttttgtta
tggaatactttgggttcctaatctatggtaattgagagttttgctgggta
tagtagcctggtttggcctttgtgttctcttagtgtctgtataacatctt
tccaggatcttctggctttcatagtatctggtgaaaagtctggcataatt
ccaaaaggcctgcctttatatgttacttgacctttttccctttctgcttt
taatattctatcttaatttagtgtatttgttttttctgattcctatgtgt
ctggaggaatttctttttctggtccagtctatttggagttctgtaggctt
cttgtatattcatgggcatctctttctttaggtatgggaagttttcttct
ataattttgttgaagatatttcctgggcctttaatttgaaatcttcattc
tcatctactcctattatctgtaagtttggtcttcttattgtgtcctggat
ttcctggatgttttgagttagggtctttttgcattgtgcattttctttga
ttgttgtgtccatgttcctattggaatcttctgcacctgagatcttctct
ttctatctcttgttttcctgttgctgaatgcctcacaattctatgttcct
tgaatttcctttttccaagggtttctcttattctctcaaggtgtgtcctc
ccctttggtttccttcatgtttccatactcttcacactttag
gaattcctttataaagtagaaataccagggattttcgtttcagtttatga
aattacacttagctggtttatttttttctctctccacttgaaacccacaa
gtttttattaaggctgtggttcatatttcaaatagtaagaaatcctcagg
tctctcccctttcttccccttctaaataaatctacaaagcacctggattt
agaagaacaacagagatatattggctattaactcagaaaactagcaaaca
cttccataatagaaataaatagcgtgtactgtaatcgatgaggaggcaac
aacccatattgtttattgattcataaggttaagattaaagttggattctt
gagcgtgtttatcaacacacttttttttttttttaagcagtaagtgaacc
tggaatcccacaagccaatcaataaagtttaaaggcttcagtgaatctaa
cccataacaggtccttgtttggggaacatgctcaagaaacacatgtgcct
ttaagaggtcttgaaagactttacacccatggaccattaccatttccaaa
caccctgcagcattaccagcccaacatatgctgactgtatatcaccgtga
ctctctcactaaagctcttttgactggagtgcttttaatacccactttct
cagctgagctcaggagtgatttgttttacatgccacattaatcctttcca
cattttctggatgaggcaaccacaattccacttgtgaggtgtttctaaaa
cacagttataggaatagagcagcggggtcccagctttgacaacttccccc
taggcagctgacaaagtgggctatcatgcttttgctttaaactcttcaaa
caagcaattgtgcccagccactatggtggccagccttccaagcctgcagg
aggccctatttattgaaggcaatttactctcaattaaacgctgtaggatc
tttagagatgtatgctgtatgatactaatgcatatagtaaaatgaagatc
atgtagaaagggaaagggatgggagaaataaattactaaagacacctggc
aaaagcaagtagtccaaatatacacttccctaccattcaaaggagcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_37519892_37521000
seq2: B6Ng01-294C08.g_66_1164

seq1  GAATTCCTTTATAAAGTAGAAATACCAGGGATTTTCGTTTCAGTTTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTATAAAGTAGAAATACCAGGGATTTTCGTTTCAGTTTATGA  50

seq1  AATTACACTTAGCTGGTTTATTTTTTTCTCTCTCCACTTGAAACCCACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACACTTAGCTGGTTTATTTTTTTCTCTCTCCACTTGAAACCCACAA  100

seq1  GTTTTTATTAAGGCTGTGGTTCATATTTCAAATAGTAAGAAATCCTCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTAAGGCTGTGGTTCATATTTCAAATAGTAAGAAATCCTCAGG  150

seq1  TCTCTCCCCTTTCTTCCCCTTCTAAATAAATCTACAAAGCACCTGGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCCCTTTCTTCCCCTTCTAAATAAATCTACAAAGCACCTGGATTT  200

seq1  AGAAGAACAACAGAGATATATTGGCTATTAACTCAGAAAACTAGCAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACAACAGAGATATATTGGCTATTAACTCAGAAAACTAGCAAACA  250

seq1  CTTCCATAATAGAAATAAATAGCGTGTACTGTAATCGATGAGGAGGCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAATAGAAATAAATAGCGTGTACTGTAATCGATGAGGAGGCAAC  300

seq1  AACCCATATTGTTTATTGATTCATAAGGTTAAGATTAAAGTTGGATTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCATATTGTTTATTGATTCATAAGGTTAAGATTAAAGTTGGATTCTT  350

seq1  GAGCGTGTTTATCAACACACTTTTTTTTTTTTTTAAGCAGTAAGTGAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGTGTTTATCAACACACTTTTTTTTTTTTTTAAGCAGTAAGTGAACC  400

seq1  TGGAATCCCACAAGCCAATCAATAAAGTTTAAAGGCTTCAGTGAATCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCCCACAAGCCAATCAATAAAGTTTAAAGGCTTCAGTGAATCTAA  450

seq1  CCCATAACAGGTCCTTGTTTGGGGAACATGCTCAAGAAACACATGTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAACAGGTCCTTGTTTGGGGAACATGCTCAAGAAACACATGTGCCT  500

seq1  TTAAGAGGTCTTGAAAGACTTTACACCCATGGACCATTACCATTTCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGTCTTGAAAGACTTTACACCCATGGACCATTACCATTTCCAAA  550

seq1  CACCCTGCAGCATTACCAGCCCAACATATGCTGACTGTATATCACCGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGCAGCATTACCAGCCCAACATATGCTGACTGTATATCACCGTGA  600

seq1  CTCTCTCACTAAAGCTCTTTTGACTGGAGTGCTTTTAATACCCACTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCACTAAAGCTCTTTTGACTGGAGTGCTTTTAATACCCACTTTCT  650

seq1  CAGCTGAGCTCAGGAGTGATTTGTTTTACATGCCACATTAATCCTTTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGCTCAGGAGTGATTTGTTTTACATGCCACATTAATCCTTTCCA  700

seq1  CATTTTCTGGATGAGGCAACCACAATTCCACTTGTGAGGTGTTTCTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCTGGATGAGGCAACCACAATTCCACTTGTGAGGTGTTTCTAAAA  750

seq1  CACAGTTATAGGAATAGAGCAGCGGGGTCCCAGCTTTGACAACTTCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTATAGGAATAGAGCAGCGGGGTCCCAGCTTTGACAACTTCCCCC  800

seq1  TAGGCAGCTGACAAAGTGGGCTATCATGCTTTTGCTTTAAACTCTTCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGCTGACAAAGTGGGCTATCATGCTTTTGCTTTAAACTCTTCAAA  850

seq1  CAAGCAATTGTGCCCAGCCACTAGGGTGGCCAGCCTTCCAAGCCTGCAGG  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAGCAATTGTGCCCAGCCACTATGGTGGCCAGCCTTCCAAGCCTGCAGG  900

seq1  AGGCCCTATTTATTGAAGGCAATTTACTCTCAATTAAAACGCTGTAGGAA  950
      ||||||||||||||||||||||||||||||||||| |||||||||||| |
seq2  AGGCCCTATTTATTGAAGGCAATTTACTCTCAATT-AAACGCTGTAGG-A  948

seq1  TCTTTAGAGATGTAATGCTGTATTGATACTAATGCATATTAGTAAAATGA  1000
      ||||||||||||| |||||||| ||||||||||||||| |||||||||||
seq2  TCTTTAGAGATGT-ATGCTGTA-TGATACTAATGCATA-TAGTAAAATGA  995

seq1  AGATCATGTAGAAAGGGAAAGGGATGGGAGAAATAAAATACTTAAAAGAC  1050
      ||||||||||||||||||||||||||||||||||||| ||||  ||||||
seq2  AGATCATGTAGAAAGGGAAAGGGATGGGAGAAATAAATTACT--AAAGAC  1043

seq1  ACCCTGGCAAAAGCAAAGGAAGTTCATATATACACTTCCCTACCATTCAA  1100
      | ||||||||||||||  | ||| || |||||||||||||||||||||||
seq2  A-CCTGGCAAAAGCAA--GTAGTCCAAATATACACTTCCCTACCATTCAA  1090

seq1  AAGAGCATT  1109
      | |||||||
seq2  AGGAGCATT  1099