BAC Information

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BAC

Clone NameB6Ng01-295B22
Chromosome15 (Build37)12 (Build37)
Map Location 57,868,306 - 57,868,712118,940,257 - 118,940,739
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBC026439, Zhx2, Derl1, Wdr67, BC030396, 9130401M01Rik
Downstream geneZhx1, Atad2, LOC665244, 2410187C16Rik, Fbxo32, 8230402K04Rik, Anxa13, LOC100040231, D15Ertd621e, EG631797, Tmem65, EG546638, Trmt12, Rnf139, Tatdn1, Ndufb9, Mtss1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295B22.bB6Ng01-295B22.g
ACCGA091073GA091074
length400478
definitionB6Ng01-295B22.b B6Ng01-295B22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(57,868,306 - 57,868,712)(118,940,257 - 118,940,739)
sequence
cagtactctggaggggaagggcagtaaaggtagaggcagaattccaatcc
tagactatgcagtgagaccttgtctcaaaaatcaactaccacagtggggc
agtgacagtgcatgctgttaacacaagcactggagaggcagatctgtgag
tttgaggccagcctggtctacagaggtagttctaggacagccagggctat
acaaagaaaccctatctcaaaaatgaaaaaaaaaagaaaaagaaaagaaa
agaaaagaaaaatcaactactaggaacagaaaggaaaaaggatggcagtt
acaggggcagtgaggagagatgaaactcatgtctaatgggcaagactttc
tattgattgagagtggtctgcagtgggcaggggagacagccacacaacac

tgtcacatagccaggaacaggtgtggatccaagtaaacttgggttttctt
ggcctaacagcagagtggtggtagtggtggggagttggtgtacagaggct
ggacattcttggtgctttagaattaaaaatattacaccaggacctgaatt
gattcgattgttagaatgattattaattgcttgaagtatccatgtgtcag
gcttctaatttaagatattatgtttaaattaaattttcctctggttcctg
aagctgtagcatgtttacttgacaagcacttaagaacacagcttgtgtct
ttgtgtgatgctaatcatgggagccagcactagctcagagaggtcacaga
attaaacccagtggctcttggaaccaggattttattttttcttggtagcc
gctgacaaattagtattaatcgtttgggacccctgacggtttccaatctg
atctatgctgttaagtgaaaatgttgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_57868306_57868712
seq2: B6Ng01-295B22.b_184_311

seq1  AGAGGCAGGTGGATCTCTGAGTTCGAGGGCAGCCTGGTCTACAAAGTGAG  50
      |||||||    ||||| |||||| |||| |||||||||||||| ||  ||
seq2  AGAGGCA----GATCTGTGAGTTTGAGGCCAGCCTGGTCTACAGAGGTAG  46

seq1  TTCCAGGACAGCCAGGGCTATACAAAGAAACCCTGTCTCGAAAAACCAAA  100
      ||| |||||||||||||||||||||||||||||| |||| |||||  |||
seq2  TTCTAGGACAGCCAGGGCTATACAAAGAAACCCTATCTC-AAAAATGAAA  95

seq1  AAAACAAAAAAACAAAAAACAAAACAAAA-AAAAAACATGGCCTCACCTA  149
      |||| ||| ||| | |||| |||| |||| ||||                
seq2  AAAA-AAAGAAAAAGAAAAGAAAAGAAAAGAAAA----------------  128

seq1  ATAAGCCTCAAGACAGTAAACCAATGAAATGAGAGGGCTTTAGACACTGT  199
                                                        
seq2  --------------------------------------------------  128

seq1  AACAGTTAAATCTACCCTGTAAGCTTAGAAATTGCAGGTGTCCTAGGCAG  249
                                                        
seq2  --------------------------------------------------  128

seq1  TGGTGGCACATGTCATTAATCCCAGCACTGGGGAGGCAGAGGCGGGCAGA  299
                                                        
seq2  --------------------------------------------------  128

seq1  TTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGATAGGC  349
                                                        
seq2  --------------------------------------------------  128

seq1  AGGGCTATACAAAGAAACCCTGTCTCAAAAAAAAAGAAAAGAAAAGAGAA  399
                                                        
seq2  --------------------------------------------------  128

seq1  AAAGAAAA  407
              
seq2  --------  128

seq1: chr12_118940257_118940739
seq2: B6Ng01-295B22.g_66_549

seq1  GAATTCTGTCACATAGCCAGGAACAGGTGTGGATCCAAGTAAACTTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCACATAGCCAGGAACAGGTGTGGATCCAAGTAAACTTGGGT  50

seq1  TTTCTTGGCCTAACAGCAGAGTGGTGGTAGTGGTGGGGAGTTGGTGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGCCTAACAGCAGAGTGGTGGTAGTGGTGGGGAGTTGGTGTACA  100

seq1  GAGGCTGGACATTCTTGGTGCTTTAGAATTAAAAATATTACACCAGGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGGACATTCTTGGTGCTTTAGAATTAAAAATATTACACCAGGACC  150

seq1  TGAATTGATTCGATTGTTAGAATGATTATTAATTGCTTGAAGTAGCCATG  200
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAATTGATTCGATTGTTAGAATGATTATTAATTGCTTGAAGTATCCATG  200

seq1  TGTCAGGCTTCTAATTTAAGATATTATGTTTAAATTAAATTTTCCTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGCTTCTAATTTAAGATATTATGTTTAAATTAAATTTTCCTCTGG  250

seq1  TTCCTGAAGCTGTAGCATGTTTACTTGACAAGCACTTAGGAACACAGCTT  300
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTCCTGAAGCTGTAGCATGTTTACTTGACAAGCACTTAAGAACACAGCTT  300

seq1  GTGTCTTTGTGTGATGCTAATCATGGGAGCCAGCAGTAGCTCAGAGAGGT  350
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTGTCTTTGTGTGATGCTAATCATGGGAGCCAGCACTAGCTCAGAGAGGT  350

seq1  CACAGTATTAAACCCAGTGGCTCTTGGAACCAGGATGCTAATTTTTATTG  400
      ||||| ||||||||||||||||||||||||||||||  || ||||| |||
seq2  CACAGAATTAAACCCAGTGGCTCTTGGAACCAGGATTTTATTTTTTCTTG  400

seq1  GTAGCCGCTGACAAATTAGTATTAAACGTTTTGTACCCCTGACGGTTTCC  450
      ||||||||||||||||||||||||| ||||| | ||||||||||||||||
seq2  GTAGCCGCTGACAAATTAGTATTAATCGTTTGGGACCCCTGACGGTTTCC  450

seq1  AATCTGATCTATGCTGTTAAGTG-AAATGTTGTA  483
      ||||||||||||||||||||||| ||||||||||
seq2  AATCTGATCTATGCTGTTAAGTGAAAATGTTGTA  484