BAC Information

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BAC

Clone NameB6Ng01-296C13
Chromosome12 (Build37)
Map Location 13,996,070 - 13,997,119
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668473, LOC628449, Ddx1, LOC627199, LOC627189, LOC100043243, LOC100042396, LOC238091, EG633789, LOC668481
Downstream geneAW125753, LOC100043256, Map1lc3-ps7, LOC668492
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-296C13.b
ACCGA091840
length1,050
definitionB6Ng01-296C13.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacttcatctggaataacaaaaaacccaggatagcaaaaaca
attctcaacaataaaagaacttctgggagtttcaccatccctgacctcaa
cctgtactacagaacaatagtgataaaaattgcatggtatgggtacagag
acagacaggtagatcaatggaatagaattgaagacccagaaataaaccca
cacatctatggtcacttgatctttgacaaagaagccaaaccatccagtgt
aaaaaggaaggcatctttaacaaatggcagtagtttaactggcagactca
gtgtagaagaatccaaattgatccatatttatctccttgtacaaagctca
agtacaagtggatcaaggacttccatataaaaccagaaacactgaatttt
gtgctcattttaaaattatttcattgtaattcattgcaatttgaaattag
ttactttaaaagttgttgctgctcacctataatctattttacatacaatc
atagctctaagttgtacaatatgaaacaaataattgcattgctacatttt
gctgatgagaaagtgatgtctaacactggctatctgctgaaggccacaaa
gtgatgcctaaccacaagtgatcccttctaggtttatgtccagagctatt
tctgggccaaaaccaatcaaatggacatacccttcataaatgaatacccc
agttatcaaccatttcaaatgccaacttatttacatttctgtttttttgt
gtttgttgggtttttgttgttgttgtttgtttgcttttggttttgttttt
ttcgagacagggtttctctatatagccctggctgtcctggaactcagaaa
tcctcctgcctctgcctcccaagtgctgggattaaaagtgtgcatcacca
ctgcccggccttatttacatttctgaaacaaacttgcagtgtggagttaa
atttactgctagataaacctctgatgacacattaccagttttccatatga
taattccctacatattgtataggtattatgtgcctgtctatggggtgtgg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_13996070_13997119
seq2: B6Ng01-296C13.b_48_1097

seq1  GAATTCTCAACTTCATCTGGAATAACAAAAAACCCAGGATAGCAAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACTTCATCTGGAATAACAAAAAACCCAGGATAGCAAAAACA  50

seq1  ATTCTCAACAATAAAAGAACTTCTGGGAGTTTCACCATCCCTGACCTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCAACAATAAAAGAACTTCTGGGAGTTTCACCATCCCTGACCTCAA  100

seq1  CCTGTACTACAGAACAATAGTGATAAAAATTGCATGGTATGGGTACAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTACAGAACAATAGTGATAAAAATTGCATGGTATGGGTACAGAG  150

seq1  ACAGACAGGTAGATCAATGGAATAGAATTGAAGACCCAGAAATAAACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGGTAGATCAATGGAATAGAATTGAAGACCCAGAAATAAACCCA  200

seq1  CACATCTATGGTCACTTGATCTTTGACAAAGAAGCCAAACCATCCAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTATGGTCACTTGATCTTTGACAAAGAAGCCAAACCATCCAGTGT  250

seq1  AAAAAGGAAGGCATCTTTAACAAATGGCAGTAGTTTAACTGGCAGACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAAGGCATCTTTAACAAATGGCAGTAGTTTAACTGGCAGACTCA  300

seq1  GTGTAGAAGAATCCAAATTGATCCATATTTATCTCCTTGTACAAAGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAAGAATCCAAATTGATCCATATTTATCTCCTTGTACAAAGCTCA  350

seq1  AGTACAAGTGGATCAAGGACTTCCATATAAAACCAGAAACACTGAATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAGTGGATCAAGGACTTCCATATAAAACCAGAAACACTGAATTTT  400

seq1  GTGCTCATTTTAAAATTATTTCATTGTAATTCATTGCAATTTGAAATTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCATTTTAAAATTATTTCATTGTAATTCATTGCAATTTGAAATTAG  450

seq1  TTACTTTAAAAGTTGTTGCTGCTCACCTATAATCTATTTTACATACAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTAAAAGTTGTTGCTGCTCACCTATAATCTATTTTACATACAATC  500

seq1  ATAGCTCTAAGTTGTACAATATGAAACAAATAATTGCATTGCTACATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCTAAGTTGTACAATATGAAACAAATAATTGCATTGCTACATTTT  550

seq1  GCTGATGAGAAAGTGATGTCTAACACTGGCTATCTGCTGAAGGCCACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGAGAAAGTGATGTCTAACACTGGCTATCTGCTGAAGGCCACAAA  600

seq1  GTGATGCCTAACCACAAGTGATCCCTTCTAGGTTTATGTCCAGAGCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGCCTAACCACAAGTGATCCCTTCTAGGTTTATGTCCAGAGCTATT  650

seq1  TCTGGGCCAAAACCAATCAAATGGACATACCCTTCATAAATGAATACCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGCCAAAACCAATCAAATGGACATACCCTTCATAAATGAATACCCC  700

seq1  AGTTATCAACCATTTCAAATGCCAACTTATTTACATTTCTGTTTTTTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCAACCATTTCAAATGCCAACTTATTTACATTTCTGTTTTTTTGT  750

seq1  GTTTGTTGGGTTTTTGTTGTTGTTGTTTGTTTGCTTTTGGTTTTGTTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGGGTTTTTGTTGTTGTTGTTTGTTTGCTTTTGGTTTTGTTTTT  800

seq1  TTCGAGACAGGGTTTCTCTATATAGCCCTGGCTGTCCTGGAACTCAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAGACAGGGTTTCTCTATATAGCCCTGGCTGTCCTGGAACTCAGAAA  850

seq1  TCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAAGTGTGCATCACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAAGTGTGCATCACCA  900

seq1  CTGCCCGGCCTTATTTACATTTCTGAAACAAACTTGCAGTGTGGAGTTAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCGGCCTTATTTACATTTCTGAAACAAACTTGCAGTGTGGAGTTAA  950

seq1  ATTTACTGCTAGATAAACCTCTGATGACACATTACCAGTTTTCCATATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTGCTAGATAAACCTCTGATGACACATTACCAGTTTTCCATATGA  1000

seq1  TAATT-CCTACATATTGTATAAGGGTATTATGTGGCTGTCTATGGGG-GT  1048
      ||||| |||||||||||||||  ||||||||||| |||||||||||| ||
seq2  TAATTCCCTACATATTGTATA--GGTATTATGTGCCTGTCTATGGGGTGT  1048

seq1  GG  1050
      ||
seq2  GG  1050


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