BAC Information

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BAC

Clone NameB6Ng01-297E08
Chromosome12 (Build37)
Map Location 94,916,545 - 95,064,987
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream gene2610022K04Rik-ps, EG633639
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297E08.bB6Ng01-297E08.g
ACCGA092668GA092669
length1,1261,105
definitionB6Ng01-297E08.b B6Ng01-297E08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,063,864 - 95,064,987)(94,916,545 - 94,917,633)
sequence
gaattctcctttgttaaaagtatttattgtcaacttttaaacatatttat
ttttggagaaatttactctttaatatggctattaatagttttagatataa
taaagtaagcttatattatgaatgaatacaaagtatattcctacctttga
gtgatataatgattttgaaatatttttttatgtttgaaaattggcacaat
ttgcaaggtggatgattttatgttctatcaatgttgatcaaaatagcttt
tgttcattaaaatcaaactacatgatgagtaatttacatatgtgacaaca
ctcatgtacaaaaatgttcttatgaaaacttatgttctgcaaaatgaatg
tggggtaaaataaaataaaatgtttatttttttaaaaaagcaataataaa
aattgtatctaaaaagtacaaagattagcctttgaaattactaaacattt
gttttattttatgattattatattaaaaaatgtcttatcatgtacctcaa
tttaaacttcaacaacacacgcaatcaaaacagatacaatcatgttgtct
tcctgcctcagatttgtgggttttacaattgcaaagtttgtgttattaat
atggatgaaactagcaacagcactccttttagcacacccctaaaccagaa
agttaagtatctgcctaaaagcattgctgaaggtggttctgtttaacatt
catccaggtgaagtagccttttattccaaggaacaacctaggatgtcacc
acaaaagagcagctaatgcctgagttcatataggaccctcttttttatga
gaaaactctgcttgtgattttaagttaacacaaatattcatttatagttt
caaacatcccaagacaattaagaattacactgaattcactttgcctgtat
tttagtagaaccaaaaactaggatgatagtatgtgtgcttataacgtgtt
tcactaaatgtcctaaagtagctattaaaggtatgcttctcagaaaaaaa
atgcctttaaaattattaccttttattggtaatgtacctttgtcatcaag
gattatagtgagaaatcaggtgagattaaagtgtcttatttccatcaaca
cattcatagagattccatgtataaat

gaattcattggcacataatgaagtcaacttgaagtcagtacagttgactg
tggtgttttatgtacaggttttctctcagaacagcaccgcacacttttgt
tttgttcatgttattgagataaagcacctcagaaatattgagaaaaaatt
gaaattgaaagagattcctgaaggcttatctttttatcttgttgatcttc
cttcagaaagtgttttctcagcgctttatagaatgtcaaacataaatagg
accctggagctcatccttcatgtgatgagagagtcaatacatttggaatg
cttcacaaaacaattttcttctttcacagagaaactagagcaattaggac
atgaagggatattaagcagtctgacacaagtgacccctggtatgacccaa
taactgtaagcagggctgcagagacagacaaaggtagtaagagacagaga
tagagacagagagaataagagagatgggggaaaggaagagggatatggag
gctgagataaagagagattatcaattcttggtagattttaaatttgttgt
ttataatattaggttctgataatgtttgatgataagtacataaacaatgg
gaaattgagatattaattttttaagcgaagaaaaacataattaccaagat
caattgtgttgggtacattaggtaagaacgtctgctattgatctaaaaga
aattgtgaccacaaaatcagacaggtgacacttgagagccacgtaaaaga
taaatgataactattctccttaattctcaaatttgtcacatttcaagggg
tataaaatacttttatcacatgaaattttctgtgtcagtactcctgggag
accagttctctctaagaggaatttggggagtttctgttggcacaagtcct
gagtcagctcctgggtgaagatggaaaccagaaaggatccttgtcctagg
ctgctcctcagtggcttgttgtcctgaagggctccggacagttccctctg
agccagaagtgggtggccttttacctgtactcacagccatgtcaggactc
ctggaaggacctcattccttaatctccgttggtattggggtatggagcac
tgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_95063864_95064987
seq2: B6Ng01-297E08.b_51_1176 (reverse)

seq1  ATTTATACATGGA---TCTATGAATTGTGTTGATTGAAAT-AGACACTTT  46
      |||||||||||||   |||||||| ||||||||| ||||| |||||||||
seq2  ATTTATACATGGAATCTCTATGAA-TGTGTTGATGGAAATAAGACACTTT  49

seq1  AATCTCACCTGATGTCTTCACTATAATTCTTTGATGAC-AAGGTACATTA  95
      ||||||||||||| || ||||||||| || |||||||| |||||||||||
seq2  AATCTCACCTGATTTC-TCACTATAA-TCCTTGATGACAAAGGTACATTA  97

seq1  CCAATAAAAGGTAATAATTTTAAAGGCATTTTTTTTTCTGAGAAGCATAC  145
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCAATAAAAGGTAATAATTTTAAAGGCA-TTTTTTTTCTGAGAAGCATAC  146

seq1  C-TTAATAGCTACTTTAGGACATTTAGTGAAACACGTTATAAGCACACAT  194
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATAGCTACTTTAGGACATTTAGTGAAACACGTTATAAGCACACAT  196

seq1  ACTATCATCCTAGTTTTTGGTTCTACTAAAATACAGGCAAAGTGAATTCA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCATCCTAGTTTTTGGTTCTACTAAAATACAGGCAAAGTGAATTCA  246

seq1  GTGTAATTCTTAATTGTCTTGGGATGTTTGAAACTATAAATGAATATTTG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTCTTAATTGTCTTGGGATGTTTGAAACTATAAATGAATATTTG  296

seq1  TGTTAACTTAAAATCACAAGCAGAGTTTTCTCATAAAAAAGAGGGTCCTA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTTAAAATCACAAGCAGAGTTTTCTCATAAAAAAGAGGGTCCTA  346

seq1  TATGAACTCAGGCATTAGCTGCTCTTTTGTGGTGACATCCTAGGTTGTTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACTCAGGCATTAGCTGCTCTTTTGTGGTGACATCCTAGGTTGTTC  396

seq1  CTTGGAATAAAAGGCTACTTCACCTGGATGAATGTTAAACAGAACCACCT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAATAAAAGGCTACTTCACCTGGATGAATGTTAAACAGAACCACCT  446

seq1  TCAGCAATGCTTTTAGGCAGATACTTAACTTTCTGGTTTAGGGGTGTGCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAATGCTTTTAGGCAGATACTTAACTTTCTGGTTTAGGGGTGTGCT  496

seq1  AAAAGGAGTGCTGTTGCTAGTTTCATCCATATTAATAACACAAACTTTGC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGTGCTGTTGCTAGTTTCATCCATATTAATAACACAAACTTTGC  546

seq1  AATTGTAAAACCCACAAATCTGAGGCAGGAAGACAACATGATTGTATCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTAAAACCCACAAATCTGAGGCAGGAAGACAACATGATTGTATCTG  596

seq1  TTTTGATTGCGTGTGTTGTTGAAGTTTAAATTGAGGTACATGATAAGACA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTGCGTGTGTTGTTGAAGTTTAAATTGAGGTACATGATAAGACA  646

seq1  TTTTTTAATATAATAATCATAAAATAAAACAAATGTTTAGTAATTTCAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAATATAATAATCATAAAATAAAACAAATGTTTAGTAATTTCAAA  696

seq1  GGCTAATCTTTGTACTTTTTAGATACAATTTTTATTATTGCTTTTTTAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAATCTTTGTACTTTTTAGATACAATTTTTATTATTGCTTTTTTAAA  746

seq1  AAAATAAACATTTTATTTTATTTTACCCCACATTCATTTTGCAGAACATA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACATTTTATTTTATTTTACCCCACATTCATTTTGCAGAACATA  796

seq1  AGTTTTCATAAGAACATTTTTGTACATGAGTGTTGTCACATATGTAAATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCATAAGAACATTTTTGTACATGAGTGTTGTCACATATGTAAATT  846

seq1  ACTCATCATGTAGTTTGATTTTAATGAACAAAAGCTATTTTGATCAACAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATCATGTAGTTTGATTTTAATGAACAAAAGCTATTTTGATCAACAT  896

seq1  TGATAGAACATAAAATCATCCACCTTGCAAATTGTGCCAATTTTCAAACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAACATAAAATCATCCACCTTGCAAATTGTGCCAATTTTCAAACA  946

seq1  TAAAAAAATATTTCAAAATCATTATATCACTCAAAGGTAGGAATATACTT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATATTTCAAAATCATTATATCACTCAAAGGTAGGAATATACTT  996

seq1  TGTATTCATTCATAATATAAGCTTACTTTATTATATCTAAAACTATTAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATTCATAATATAAGCTTACTTTATTATATCTAAAACTATTAAT  1046

seq1  AGCCATATTAAAGAGTAAATTTCTCCAAAAATAAATATGTTTAAAAGTTG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATATTAAAGAGTAAATTTCTCCAAAAATAAATATGTTTAAAAGTTG  1096

seq1  ACAATAAATACTTTTAACAAAGGAGAATTC  1124
      ||||||||||||||||||||||||||||||
seq2  ACAATAAATACTTTTAACAAAGGAGAATTC  1126


seq1: chr12_94916545_94917633
seq2: B6Ng01-297E08.g_68_1172

seq1  GAATTCATTGGCACATAATGAAGTCAACTTGAAGTCAGTACAGTTGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGCACATAATGAAGTCAACTTGAAGTCAGTACAGTTGACTG  50

seq1  TGGTGTTTTATGTACAGGTTTTCTCTCAGAACAGCACCGCACACTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTTATGTACAGGTTTTCTCTCAGAACAGCACCGCACACTTTTGT  100

seq1  TTTGTTCATGTTATTGAGATAAAGCACCTCAGAAATATTGAGAAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCATGTTATTGAGATAAAGCACCTCAGAAATATTGAGAAAAAATT  150

seq1  GAAATTGAAAGAGATTCCTGAAGGCTTATCTTTTTATCTTGTTGATCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGAAAGAGATTCCTGAAGGCTTATCTTTTTATCTTGTTGATCTTC  200

seq1  CTTCAGAAAGTGTTTTCTCAGCGCTTTATAGAATGTCAAACATAAATAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAAGTGTTTTCTCAGCGCTTTATAGAATGTCAAACATAAATAGG  250

seq1  ACCCTGGAGCTCATCCTTCATGTGATGAGAGAGTCAATACATTTGGAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGAGCTCATCCTTCATGTGATGAGAGAGTCAATACATTTGGAATG  300

seq1  CTTCACAAAACAATTTTCTTCTTTCACAGAGAAACTAGAGCAATTAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAAAACAATTTTCTTCTTTCACAGAGAAACTAGAGCAATTAGGAC  350

seq1  ATGAAGGGATATTAAGCAGTCTGACACAAGTGACCCCTGGTATGACCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGGATATTAAGCAGTCTGACACAAGTGACCCCTGGTATGACCCAA  400

seq1  TAACTGTAAGCAGGGCTGCAGAGACAGACAAAGGTAGTAAGAGACAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTAAGCAGGGCTGCAGAGACAGACAAAGGTAGTAAGAGACAGAGA  450

seq1  TAGAGACAGAGAGAATAAGAGAGATGGGGGAAAGGAAGAGGGATATGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGAGAGAATAAGAGAGATGGGGGAAAGGAAGAGGGATATGGAG  500

seq1  GCTGAGATAAAGAGAGATTATCAATTCTTGGTAGATTTTAAATTTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATAAAGAGAGATTATCAATTCTTGGTAGATTTTAAATTTGTTGT  550

seq1  TTATAATATTAGGTTCTGATAATGTTTGATGATAAGTACATAAACAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATTAGGTTCTGATAATGTTTGATGATAAGTACATAAACAATGG  600

seq1  GAAATTGAGATATTAATTTTTTAAGCGAAGAAAAACATAATTACCAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTGAGATATTAATTTTTTAAGCGAAGAAAAACATAATTACCAAGAT  650

seq1  CAATTGTGTTGGGTACATTAGGTAAGAACGTCTGCTATTGATCTAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTGTTGGGTACATTAGGTAAGAACGTCTGCTATTGATCTAAAAGA  700

seq1  AATTGTGACCACAAAATCAGACAGGTGACACTTGAGAGCCACGTAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGACCACAAAATCAGACAGGTGACACTTGAGAGCCACGTAAAAGA  750

seq1  TAAATGATAACTATTCTCCTTAATTCTCAAATTTGTCACA-TTCAAGGGG  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAATGATAACTATTCTCCTTAATTCTCAAATTTGTCACATTTCAAGGGG  800

seq1  TATAAAATAC-TTTATCACATGAAA-TTTCTGTGTCAGTACTCCTGGGAG  847
      |||||||||| |||||||||||||| ||||||||||||||||||||||||
seq2  TATAAAATACTTTTATCACATGAAATTTTCTGTGTCAGTACTCCTGGGAG  850

seq1  ACCAGTTCTCTCTAAGAGGAATTT-GGGAG-TTCTG-TGGCACAAGTCCT  894
      |||||||||||||||||||||||| ||||| ||||| |||||||||||||
seq2  ACCAGTTCTCTCTAAGAGGAATTTGGGGAGTTTCTGTTGGCACAAGTCCT  900

seq1  GAGTCAGCTCCTGGGTGAAGATGGAAACCAG-AAGGATCC-TGTCCTAGG  942
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  GAGTCAGCTCCTGGGTGAAGATGGAAACCAGAAAGGATCCTTGTCCTAGG  950

seq1  CTGCTCCTCAGTGCCT--GTGTCCTG-AGGGCTCCAGACAGGTTCCTCTG  989
      ||||||||||||| ||   ||||||| |||||||| ||||| | ||||||
seq2  CTGCTCCTCAGTGGCTTGTTGTCCTGAAGGGCTCCGGACAGTTCCCTCTG  1000

seq1  AG-CAGAAGT-GGTGGC--TTTACCTGTACTCACAGGCATGTCAGGACTC  1035
      || ||||||| ||||||  ||||||||||||||||| |||||||||||||
seq2  AGCCAGAAGTGGGTGGCCTTTTACCTGTACTCACAGCCATGTCAGGACTC  1050

seq1  CTGGAAGACCCTCATTCCTAAATC-CCAGTGGTATTTGGGTATGGAGCAC  1084
      |||||||  |||||||||| |||| ||  ||||||| |||||||||||||
seq2  CTGGAAGGACCTCATTCCTTAATCTCCGTTGGTATTGGGGTATGGAGCAC  1100

seq1  TGTGG  1089
      |||||
seq2  TGTGG  1105


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