BAC Information

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BAC

Clone NameB6Ng01-297G10
Chromosome12 (Build37)
Map Location 71,669,286 - 71,669,806
singlet/doubletsinglet
Overlap genenone
Upstream geneGm71, Sos2, LOC100040879, L2hgdh, Atp5s, Cdkl1, Map4k5, Spg3a, EG622339, Sav1, LOC100040999, Nin, ENSMUSG00000056391, Gm804, Pygl, Trim9, Txndc1, LOC100040965
Downstream geneLOC100041061, Frmd6, Actr10, Psma3, 3110056K07Rik, Arid4a, Timm9, LOC100041035, 2700049A03Rik, LOC666162, Dact1, LOC100041190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297G10.bB6Ng01-297G10.g
ACCGA092766GA092767
length5411,166
definitionB6Ng01-297G10.b B6Ng01-297G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcagccctaaattggacatttatatcacaaatcctccttccaagcctcag
ggatcgtgtggaaagaggggtggaaagattgtaggagccaggagtgctgg
atagccataaggaaagagtgttttctggacccagaagaatagttactcat
atgtgctccacaacagctgtggtggcatgcactagacctgcgcaagctca
agccagaagatcccagcagagagtggaggagggtagttgtgaaaacccac
cactagctgaggagctctggtagatgttgggagagggagagtcggttttc
tttatgggtatagccccttgtggcttgtccacactccaatagaagacccc
atatctaggaatatttgaggagcgcaaattggttcaagaggggtgagaga
gagagagagagagagagacagagacagagagagacagagagacagagaga
gagagacagagaaagacagagagagagacagagagacagagagagagaga
gagacagagagtgagaggttagggagggaaggagagggtga
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccggtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccgaggttcactcaccttgcagggcttagtagtccaccc
tggaattatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagggagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagattaatggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcatggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaagggcagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacaccccatcaggagggtattcagctaaagcaaaaaatatcatggca
aagatgggttataaagaaggaaaagggttaggacatcaagaacaggaaag
gatagagcccatctcacctaatggaaaccaagacagacagggtctgggtt
ttccttagcgccattggggcagcacgacccataccatgaaaacagggacc
cagtgtgggttctcatgcactatctctgaaaactagagctgtgatcactg
tagagacattaaattagcaatgacctctactcacctggaatctcatttgt
atagaaaagtcagagtgaactgtcatgactcggccattaatgacaatgta
ccttatttggccagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_71669286_71669806
seq2: B6Ng01-297G10.b_71_591

seq1  TATATCACAAATCCTCCTTCCAAGCCTCAGGGATCGTGTGGAAAGAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCACAAATCCTCCTTCCAAGCCTCAGGGATCGTGTGGAAAGAGGGG  50

seq1  TGGAAAGATTGTAGGAGCCAGGAGTGCTGGATAGCCATAAGGAAAGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGATTGTAGGAGCCAGGAGTGCTGGATAGCCATAAGGAAAGAGTG  100

seq1  TTTTCTGGACCCAGAAGAATAGTTACTCATATGTGCTCCACAACAGCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGACCCAGAAGAATAGTTACTCATATGTGCTCCACAACAGCTGT  150

seq1  GGTGGCATGCACTAGACCTGCGCAAGCTCAAGCCAGAAGATCCCAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCATGCACTAGACCTGCGCAAGCTCAAGCCAGAAGATCCCAGCAGA  200

seq1  GAGTGGAGGAGGGTAGTTGTGAAAACCCACCACTAGCTGAGGAGCTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGAGGAGGGTAGTTGTGAAAACCCACCACTAGCTGAGGAGCTCTGG  250

seq1  TAGATGTTGGGAGAGGGAGAGTCGGTTTTCTTTATGGGTATAGCCCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGTTGGGAGAGGGAGAGTCGGTTTTCTTTATGGGTATAGCCCCTTG  300

seq1  TGGCTTGTCCACACTCCAATAGAAGACCCCATATCTAGGAATATTTGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTCCACACTCCAATAGAAGACCCCATATCTAGGAATATTTGAGG  350

seq1  AGCGCAAATTGGTTCAAGAGGGGTGAGAGAGAGAGAGAGAGAGAGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCAAATTGGTTCAAGAGGGGTGAGAGAGAGAGAGAGAGAGAGAGACA  400

seq1  GAGACAGAGAGAGACAGAGAGACAGAGAGAGAGAGACAGAGAAAGACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAGAGACAGAGAGACAGAGAGAGAGAGACAGAGAAAGACAGA  450

seq1  GAGAGAGACAGAGAGACAGAGAGAGAGAGAGAGACAGAGAGTGAGAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACAGAGAGACAGAGAGAGAGAGAGAGACAGAGAGTGAGAGGTT  500

seq1  AGGGAGGGAAGGAGAGGGTGA  521
      |||||||||||||||||||||
seq2  AGGGAGGGAAGGAGAGGGTGA  521