BAC Information

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BAC

Clone NameB6Ng01-297J19
Chromosome12 (Build37)
Map Location 43,404,777 - 43,405,991
singlet/doubletsinglet
Overlap genenone
Upstream geneImmp2l, EG638533
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297J19.bB6Ng01-297J19.g
ACCGA092928GA092929
length1,1961,148
definitionB6Ng01-297J19.b B6Ng01-297J19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgtttagcactgtatcccccctccttttatagtgttatttgg
ttatctgtagtctaacttcttgagttctttggatttattggatattagcc
ctctatcagatgtaggattggtaaaaatcttttcccaatctgttggttgc
cgtttgaaccccttttgtgatattatgaaacccatgacagcaatgaagca
cactcattgacaatgatttccacagttccccatgcctccttatttctctt
acatgtagccttttttattttagaggatagcagaaaacaaagatataaat
ttgaaattaaaatatgaatatgtacttttatggtataaagcagttttaga
catatgttcctttgttgaattataatatgtggaaggccagcttcacatct
gaagaaagggtgaatggagctctgatactgtttaggacttcctactaccc
ctctatttttccttcacttactaatactcagagactcaaagattcctagg
gctcccaggggttttgaaaatcttttgagttttgctgtgggccacctcat
tttcactgtggacctcttatattcttgacattctgaaaggaatttattat
gtaaaatggtcatggttccaaacttctaggcctcaaattctaatgatatc
ctgtttcatatttcaatcatatttacttgaacatttggaatgaaatggcc
ttaggacactagagattctgataacaccatacttataaaaaagggcttcc
tggaaacattgattgatgactgacatgggatggatcagtattagaaacac
caatagtataaatgttccaactaaccaggagtacatgttaattgtcacag
cattggaagctgttgtgtgtggtctcatcccattgcttactaaatgggca
aattaagctagaggagtcctctcagtacattcactttgaaaatgatcatt
tgcagatgttcctaatacatcaagctaacatgtaacacttaatatgatcc
catagcacatgacagttgttgaaatttttatcatcttatttgggtctgct
gtgacacatgatttgggaaaaagaaaagaacttctttttagtcatatgcc
actgaagaaggaaatgggtgccctctaaaaaagaattcttcagtactgga
ataattacattatcatcgatgcatgatctagggcaaaaataaatgc

gaattcaggaagaatgttgcctgttcagtgacattcaaaattgcctctgg
tattccactatcatttagaataaaagccaagtcactcccatatacaggaa
ttggtttaggaagtagatcaagctgtggttttagagtattgcattattca
tgagatggttagctagaacggaactccctaattagaaccatgacttgggt
gtgaaagtccttgccctaggagtgtaaagacctcacacctggcttctaag
actatacctgaccttagatagggctgactttgtctcagttattttattgc
ccagttcctgccagtttttgtgtttacattcctctgttttgtgtaagagt
cattaagcatccggtaacctcatttgtaccttgccgttgtgtcacctaac
ttccctactttcttctgtataaaaagattgatgctcaattagacaaatta
cattcagattctacacaacgtctcctgtgtgcttctgtctatcatttcat
ccaatgctttgcccacctgctactagagaccctttccatgaagacaaagg
ggcccagagggtgtgcgacagggctgcagcactaggaaggctgaggacca
ctgctttaaagtatattgatctgataagtgtgaatcagtcagcaactcta
aggaaaaagttagaaaccaataactgagctctgcttattgcaaatcacta
agattttattcagtgacaacctatgatgttttcactcgaacatttatgag
actccccacccttttttctacatctcccaagagattgtttgaagttttgt
ttttattttaataaaagacttttatcctttaatttaaatttctatttcat
tctgaatgggcctactatatttttcatgtatgtatgtgttgctgaatata
ttattcttgccttcaactttttaattattataattactcatcagtatctg
tttttgcattcttgtctgtttgagtgacactttaattattatgcacttgc
attatatttccagcacacaatctggtgatgtaagcctgctcacacactac
tgaagatgggtatgagtcattagcagacactcatgcctgttccagcaatt
tatagcagccttggagagaataaacaaagtgatctggaagagatttcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_43404777_43405991
seq2: B6Ng01-297J19.b_48_1243

seq1  GAATTCATTGTTTAGCACTGTATCCCCCCTCCTTTTATAGTGTTATTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTTAGCACTGTATCCCCCCTCCTTTTATAGTGTTATTTGG  50

seq1  TTATCTGTAGTCTAACTTCTTGAGTTCTTTGGATTTATTGGATATTAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTAGTCTAACTTCTTGAGTTCTTTGGATTTATTGGATATTAGCC  100

seq1  CTCTATCAGATGTAGGATTGGTAAAAATCTTTTCCCAATCTGTTGGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATCAGATGTAGGATTGGTAAAAATCTTTTCCCAATCTGTTGGTTGC  150

seq1  CGTTTGAACCCCTTTTGTGATATTATGAAACCCATGACAGCAATGAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGAACCCCTTTTGTGATATTATGAAACCCATGACAGCAATGAAGCA  200

seq1  CACTCATTGACAATGATTTCCACAGTTCCCCATGCCTCCTTATTTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATTGACAATGATTTCCACAGTTCCCCATGCCTCCTTATTTCTCTT  250

seq1  ACATGTAGCCTTTTTTATTTTAGAGGATAGCAGAAAACAAAGATATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTAGCCTTTTTTATTTTAGAGGATAGCAGAAAACAAAGATATAAAT  300

seq1  TTGAAATTAAAATATGAATATGTACTTTTATGGTATAAAGCAGTTTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTAAAATATGAATATGTACTTTTATGGTATAAAGCAGTTTTAGA  350

seq1  CATATGTTCCTTTGTTGAATTATAATATGTGGAAGGCCAGCTTCACATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTTCCTTTGTTGAATTATAATATGTGGAAGGCCAGCTTCACATCT  400

seq1  GAAGAAAGGGTGAATGGAGCTCTGATACTGTTTAGGACTTCCTACTACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGGTGAATGGAGCTCTGATACTGTTTAGGACTTCCTACTACCC  450

seq1  CTCTATTTTTCCTTCACTTACTAATACTCAGAGACTCAAAGATTCCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTTTTCCTTCACTTACTAATACTCAGAGACTCAAAGATTCCTAGG  500

seq1  GCTCCCAGGGGTTTTGAAAATCTTTTGAGTTTTGCTGTGGGCCACCTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCAGGGGTTTTGAAAATCTTTTGAGTTTTGCTGTGGGCCACCTCAT  550

seq1  TTTCACTGTGGACCTCTTATATTCTTGACATTCTGAAAGGAATTTATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGTGGACCTCTTATATTCTTGACATTCTGAAAGGAATTTATTAT  600

seq1  GTAAAATGGTCATGGTTCCAAACTTCTAGGCCTCAAATTCTAATGATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATGGTCATGGTTCCAAACTTCTAGGCCTCAAATTCTAATGATATC  650

seq1  CTGTTTCATATTTCAATCATATTTACTTGAACATTTGGAATGAAATGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCATATTTCAATCATATTTACTTGAACATTTGGAATGAAATGGCC  700

seq1  TTAGGACACTAGAGATTCTGATAACACCATACTTATAAAAAAGGGCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACACTAGAGATTCTGATAACACCATACTTATAAAAAAGGGCTTCC  750

seq1  TGGAAACATTGATTGATGACTGACATGGGATGGATCAGTATTAGAAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACATTGATTGATGACTGACATGGGATGGATCAGTATTAGAAACAC  800

seq1  CAATAGTATAAATGTTCCAACTAACCAGGAGTACATGTTAATTGTCACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTATAAATGTTCCAACTAACCAGGAGTACATGTTAATTGTCACAG  850

seq1  CATTGGAAGCTGTTGTGTGTGGTCTCATCCCATTGCTTACTAAATGGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAAGCTGTTGTGTGTGGTCTCATCCCATTGCTTACTAAATGGGCA  900

seq1  AATTAAGCTAGAGGAGTCCTCTCAGTACATTCACTTTGAAAATGATCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGCTAGAGGAGTCCTCTCAGTACATTCACTTTGAAAATGATCATT  950

seq1  TGCAAGATGTTCCTAATACATCAAGCTAACATGTAAACACTTAATATGAT  1000
      ||| |||||||||||||||||||||||||||||| |||||||||||||| 
seq2  TGC-AGATGTTCCTAATACATCAAGCTAACATGT-AACACTTAATATGA-  997

seq1  TCCCATAGCACATGACAGTTGTTGAAAATTTTTTATCATCTTATTTGGTT  1050
      |||||||||||||||||||||||||||  ||||||||||||||||||| |
seq2  TCCCATAGCACATGACAGTTGTTGAAA--TTTTTATCATCTTATTTGGGT  1045

seq1  CCTGCTGTGACACCATGATTTGGGAAAAAGAAAAG-ACTTCTTTTTAGTC  1099
       ||||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  -CTGCTGTGACA-CATGATTTGGGAAAAAGAAAAGAACTTCTTTTTAGTC  1093

seq1  ATTATG-CACTGAAG-AGGAGAT-GGTGCCCTCTAAAAAAGATATCTTTA  1146
      | |||| |||||||| |||| || ||||||||||||||||||  |||| |
seq2  A-TATGCCACTGAAGAAGGAAATGGGTGCCCTCTAAAAAAGAATTCTTCA  1142

seq1  AGGTACTGATATTAAAAATTACCATTTTATTCCATCAGATTGCATTGTAT  1196
        ||||||     || ||||||    ||||  |||| || |||||   ||
seq2  --GTACTG----GAATAATTAC---ATTAT--CATC-GA-TGCAT--GAT  1177

seq1  TTAGGGCAAAAATAAATGC  1215
       ||||||||||||||||||
seq2  CTAGGGCAAAAATAAATGC  1196


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